| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475963
Identifier: 13475963
GI number: 13475963
Start: 5912211
End: 5913197
Strand: Reverse
Name: 13475963
Synonym: mll7160
Alternate gene names: NA
Gene position: 5913197-5912211 (Counterclockwise)
Preceding gene: 13475964
Following gene: 13475962
Centisome position: 84.04
GC content: 65.35
Gene sequence:
>987_bases ATGATGTCTCGCACCAGCCGATTTGCAACCCTGTTTGCCGGACTGTTCCTCGCATTCTCCATGGTCGCGATCGATCATGC CGAGGCTCGGCGCGGCGGCAGTTTCGGCAGTCGCGGCACCCGCACGTTCCAGTCGGCGCCGCCGACCAGGACCGCGCCAG CGCCGATCGCTCCGGTCGAGCGTTCGATGACACCCAACACCGGCGTGAACTCTGCCGCCCGGCAGCCGCAGGCCGGCCCG CAGAGGCCCGGCTTCATGAGCGGCTTCGGTGGAACGATGATGCGCGGCCTGCTGATCGGCGGCCTGATCGGCCTGCTCCT GGGCCAAGGCTTCGGCGGCCTGGCCGGCATGTTCGGCTTCCTGTTGCAGGCCCTGCTCATCGGCGGCGCCATCATGCTGG CCATCCGCTTCTTCCGCACGCAGTCGGCGCAGGGCCCTGCCCCGGCGCTCGCCGGTGCCGGCAATGCCCAGGCGTCGCGA TTTGAAAACCGCGCTGCGGCACAGCAGCAGACGGCAAGCTCATTCACAATTCCCGGCTTTGGTGATGGTTCGGGCGGAGC CTCTCTGGCTGCCGATTCGGAAGAGATCCGGCTCGCACAAACTGACCTCGATGCATTCCAGCAGTTGCTGACTGACATCC AGGAAGCATTCGGGCGCGAAGACCATGCCGCCCTGCGCCGGGCGACAACGCCTGAGATGGTGTCCTATCTCTCAGAAGAG CTGGCGGACAATGCCCAGAAAGGTCTCAGGAACGAGGTCTCCGACATCACCTTGCTGCAGGCCGACATCGCCGAAAGCTG GCGCGAGAATGACCGCGACTACGCCACGGCCGCGTTGCGCTACGAGTCCCGCGACGTGATGCGCGAACGGGGCAGCGGCA AGGTCGTCGAGGGCGACGAAGACCATCCGACAGAGACGACCGAGCTGTGGACATTCACGCGTCAGAATGGCTCGAACTGG AAGCTCTCGGCAATTCAACAGGCCTGA
Upstream 100 bases:
>100_bases CTATCCCAAGCGGAAGAAATCCTTCTTCGAGGAATTGTTCGATTGACGCCCGGCGCCTGCTGAAACTTCCAAAAACCACA TCGATAAAGGTTCACCTCCG
Downstream 100 bases:
>100_bases GTCCGACCATTGTATGGGGGCGTCGGTGGCGCCTCAGCGCACGATCCTTAGGCACATCGGCGCGGCGCCGATCTTGACGG CGCGCCGATGTCCGTCAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MMSRTSRFATLFAGLFLAFSMVAIDHAEARRGGSFGSRGTRTFQSAPPTRTAPAPIAPVERSMTPNTGVNSAARQPQAGP QRPGFMSGFGGTMMRGLLIGGLIGLLLGQGFGGLAGMFGFLLQALLIGGAIMLAIRFFRTQSAQGPAPALAGAGNAQASR FENRAAAQQQTASSFTIPGFGDGSGGASLAADSEEIRLAQTDLDAFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEE LADNAQKGLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGSGKVVEGDEDHPTETTELWTFTRQNGSNW KLSAIQQA
Sequences:
>Translated_328_residues MMSRTSRFATLFAGLFLAFSMVAIDHAEARRGGSFGSRGTRTFQSAPPTRTAPAPIAPVERSMTPNTGVNSAARQPQAGP QRPGFMSGFGGTMMRGLLIGGLIGLLLGQGFGGLAGMFGFLLQALLIGGAIMLAIRFFRTQSAQGPAPALAGAGNAQASR FENRAAAQQQTASSFTIPGFGDGSGGASLAADSEEIRLAQTDLDAFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEE LADNAQKGLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGSGKVVEGDEDHPTETTELWTFTRQNGSNW KLSAIQQA >Mature_328_residues MMSRTSRFATLFAGLFLAFSMVAIDHAEARRGGSFGSRGTRTFQSAPPTRTAPAPIAPVERSMTPNTGVNSAARQPQAGP QRPGFMSGFGGTMMRGLLIGGLIGLLLGQGFGGLAGMFGFLLQALLIGGAIMLAIRFFRTQSAQGPAPALAGAGNAQASR FENRAAAQQQTASSFTIPGFGDGSGGASLAADSEEIRLAQTDLDAFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEE LADNAQKGLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGSGKVVEGDEDHPTETTELWTFTRQNGSNW KLSAIQQA
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35031; Mature: 35031
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSRTSRFATLFAGLFLAFSMVAIDHAEARRGGSFGSRGTRTFQSAPPTRTAPAPIAPVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RSMTPNTGVNSAARQPQAGPQRPGFMSGFGGTMMRGLLIGGLIGLLLGQGFGGLAGMFGF HCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLQALLIGGAIMLAIRFFRTQSAQGPAPALAGAGNAQASRFENRAAAQQQTASSFTIPGF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GDGSGGASLAADSEEIRLAQTDLDAFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH LADNAQKGLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGSGKVVEGDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCC DHPTETTELWTFTRQNGSNWKLSAIQQA CCCCCHHHHEEEECCCCCCCCHHCCCCC >Mature Secondary Structure MMSRTSRFATLFAGLFLAFSMVAIDHAEARRGGSFGSRGTRTFQSAPPTRTAPAPIAPVE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH RSMTPNTGVNSAARQPQAGPQRPGFMSGFGGTMMRGLLIGGLIGLLLGQGFGGLAGMFGF HCCCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLQALLIGGAIMLAIRFFRTQSAQGPAPALAGAGNAQASRFENRAAAQQQTASSFTIPGF HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC GDGSGGASLAADSEEIRLAQTDLDAFQQLLTDIQEAFGREDHAALRRATTPEMVSYLSEE CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHH LADNAQKGLRNEVSDITLLQADIAESWRENDRDYATAALRYESRDVMRERGSGKVVEGDE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEECCCC DHPTETTELWTFTRQNGSNWKLSAIQQA CCCCCHHHHEEEECCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA