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The map label for this gene is yecS [C]

Identifier: 13475941

GI number: 13475941

Start: 5891086

End: 5891745

Strand: Direct

Name: yecS [C]

Synonym: mlr7135

Alternate gene names: 13475941

Gene position: 5891086-5891745 (Clockwise)

Preceding gene: 13475940

Following gene: 13475942

Centisome position: 83.73

GC content: 64.39

Gene sequence:

>660_bases
ATGACCCAGTGGTCCGGCTATCTCGGCCTGATATTGCAGGGGGCGCTTGTCACCATCGAGCTGACGCTGATGGGGTCGGT
GCTTTCCCTGATCATGGCCTTTCTGGCCGGCATGGGGCGGCTGTCGCGGTTCTTCGCGCTGAGGGCGCTCGCCACCGCCT
ATATCGAATTCTTCCGCGGCACCTCGATCTTCGTGCAGCTGTTCTTCGCCTATTTCGTGCTGCCGCTGATTGGCCTCGAA
CTGACTCCACTGCAGGCCGGCGTGCTGGCCTTGGGCCTGAATGTCGGCGCCTATGCCGCCGAGGTGGTGCGCGGCGCCGT
GCAGTCGATCGGCCGTGAACAGCATGAGGCCTGCATCGCGCTCAATCTCGGCCGCTGGCAAGGCCTGCGCCATGTCATCC
TGCCGCAGGCCTTTCTGGTAATGCTGCCGACCTTCGGCAACAACGCCATCGAACTGCTCAAGGCCACCTCCGTGGTCTCG
CTGATCTCGCTCGCCGACCTGACCTTCCAGGCGCAGGTGGTGCGCGCGCAGACCGGCAACACGATGGTGCCGTTCGCCAC
CATCCTGGTCATCTATTTCGTCCTGGCGCTGCTCATTTCTTGGGGTGTGCGCTCGCTGGAGCGCCGCATGGCGCGCGGCC
TTGATGGGGTGCGCGTCTGA

Upstream 100 bases:

>100_bases
CTCGAAAAGCCAAGCAATTGGGTTTTCGCCCGCTACGCGGACCGCTCCTCAACTCCCCGTGAACGGGGAGAAGGGGCTAA
AATGAAATGTTGGAACCTAG

Downstream 100 bases:

>100_bases
TGGAGTGGGATTGGGATTTCGTATGGCAGATCATGCCGACGCTGATCCAGGGGGTGAAGATCACCATCCTGGCGACGCTG
CTGGGCTCGGTGCTGGCGGC

Product: amino acid ABC transporter protein, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRGTSIFVQLFFAYFVLPLIGLE
LTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVS
LISLADLTFQAQVVRAQTGNTMVPFATILVIYFVLALLISWGVRSLERRMARGLDGVRV

Sequences:

>Translated_219_residues
MTQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRGTSIFVQLFFAYFVLPLIGLE
LTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVS
LISLADLTFQAQVVRAQTGNTMVPFATILVIYFVLALLISWGVRSLERRMARGLDGVRV
>Mature_218_residues
TQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRGTSIFVQLFFAYFVLPLIGLEL
TPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIALNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSL
ISLADLTFQAQVVRAQTGNTMVPFATILVIYFVLALLISWGVRSLERRMARGLDGVRV

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=205, Percent_Identity=36.5853658536585, Blast_Score=137, Evalue=7e-34,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=38.0281690140845, Blast_Score=131, Evalue=4e-32,
Organism=Escherichia coli, GI1786873, Length=222, Percent_Identity=31.5315315315315, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1786874, Length=219, Percent_Identity=30.5936073059361, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1788646, Length=222, Percent_Identity=31.0810810810811, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI87082239, Length=206, Percent_Identity=34.4660194174757, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=29.2792792792793, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=28.169014084507, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1787087, Length=135, Percent_Identity=31.8518518518519, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48994930, Length=136, Percent_Identity=33.0882352941176, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515
- InterPro:   IPR014342 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 23848; Mature: 23717

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSIFVQLFFAYFVLPLIGLELTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHE
LNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLADLTFQAQVVRAQTGN
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TMVPFATILVIYFVLALLISWGVRSLERRMARGLDGVRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TQWSGYLGLILQGALVTIELTLMGSVLSLIMAFLAGMGRLSRFFALRALATAYIEFFRG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TSIFVQLFFAYFVLPLIGLELTPLQAGVLALGLNVGAYAAEVVRGAVQSIGREQHEACIA
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHHE
LNLGRWQGLRHVILPQAFLVMLPTFGNNAIELLKATSVVSLISLADLTFQAQVVRAQTGN
EECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TMVPFATILVIYFVLALLISWGVRSLERRMARGLDGVRV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]