Click here to switch to the map view.

The map label for this gene is fliY [C]

Identifier: 13475940

GI number: 13475940

Start: 5889934

End: 5890866

Strand: Direct

Name: fliY [C]

Synonym: mlr7133

Alternate gene names: 13475940

Gene position: 5889934-5890866 (Clockwise)

Preceding gene: 13475939

Following gene: 13475941

Centisome position: 83.71

GC content: 65.06

Gene sequence:

>933_bases
ATGCCCGAGGCGACAACGCCGTCCTCCAGGGACGGAAAGCCGCCTCGAACAAACCAAGACAAGAAACAGGAGTTGGGAAC
AATGAAGAAACTTGGCATTCTGGCCGGCGTCGCCGGCTTGGCACTGGCGGCGGTTCTGGCCGCCTCGATCCCGGGCTCGG
CCGACGACAGCAAGCTCGAGCAGCTGAAGGCACAGGGCTTCGCCCGTGTCGCCATCGCCAATGAGCCGCCCTACACGGCG
GTGGCGGCCGACGGCAAGGTGTCGGGCGCGGCACCCGACGTGGCGCGTGAAATCTTCAAGCGGCTCGGCGTTGGCGACAT
CGTCGCCTCGATCTCCGAATATGGCGCCATGATCCCCGGCTTGAAGGCCGGCCGCTTCGATGTCGTAACCGCCGGCCTGT
TCATGAAGCCGGAGCGTTGCGCCGCGGTCGCCTATTCCGAACCGGTGCTGTGCGACGCCGAGGCGATGCTGGTGAAGAAG
GGCAATCCGAAAGGCTTCAAGAGCTACGAGGACGTCGCCAAGGACACATCCGCCACGATCGGCGCGCCCGGTGGCGGCAC
CGAGGAGAAGCTGGCACTCAACGCAGGCGTGCCGCGCGAACGCGTCATCGTCGTGCCGGATGGCCAGAGCGGCCTGAAAA
TGGTGCAGGACGGCCGCATCGACGCCTATTCGCTGCCGGTTCTGTCGATCAACGATCTGATGAAGAAGGCCAACGACCCG
AACCTCGAAGTCATCGCCCCGGTGCAGGGCGCCCCGGTCTATTGCGACGGCGCCGCCTTCAAGAAGGGCGACGAGGCGCT
GCGCGATGCCTATGACGTCGAGCTCGCCAAGATGAAGAAGTCGGGCGAGTTCGCCAAGATCATCGAGCCTTACGGTTTCT
CGGCCGCCGCCGCGATGTCGACGACGCGCGACAAGCTCTGCTCGGCGAAGTAG

Upstream 100 bases:

>100_bases
AGGAGGGCAAACCCGACGAGATTTTCCGCAATCCCAAACAGGAGCGCACGCAAGGCTTCCTGAAGAAGATCATCGCGGCC
GGACATCGCGTCTGACCGTC

Downstream 100 bases:

>100_bases
GTGCCTCTTCTTCCTTCTCCCCGTTTACGGGGAGAAGGTGTCACGAAGTGACGGATGAGGGGCGGCGCCATACCTTTATA
AGTTCGCGATGCCCCTCATC

Product: amino acid ABC transporter protein, solute-binding component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 309

Protein sequence:

>310_residues
MPEATTPSSRDGKPPRTNQDKKQELGTMKKLGILAGVAGLALAAVLAASIPGSADDSKLEQLKAQGFARVAIANEPPYTA
VAADGKVSGAAPDVAREIFKRLGVGDIVASISEYGAMIPGLKAGRFDVVTAGLFMKPERCAAVAYSEPVLCDAEAMLVKK
GNPKGFKSYEDVAKDTSATIGAPGGGTEEKLALNAGVPRERVIVVPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDP
NLEVIAPVQGAPVYCDGAAFKKGDEALRDAYDVELAKMKKSGEFAKIIEPYGFSAAAAMSTTRDKLCSAK

Sequences:

>Translated_310_residues
MPEATTPSSRDGKPPRTNQDKKQELGTMKKLGILAGVAGLALAAVLAASIPGSADDSKLEQLKAQGFARVAIANEPPYTA
VAADGKVSGAAPDVAREIFKRLGVGDIVASISEYGAMIPGLKAGRFDVVTAGLFMKPERCAAVAYSEPVLCDAEAMLVKK
GNPKGFKSYEDVAKDTSATIGAPGGGTEEKLALNAGVPRERVIVVPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDP
NLEVIAPVQGAPVYCDGAAFKKGDEALRDAYDVELAKMKKSGEFAKIIEPYGFSAAAAMSTTRDKLCSAK
>Mature_309_residues
PEATTPSSRDGKPPRTNQDKKQELGTMKKLGILAGVAGLALAAVLAASIPGSADDSKLEQLKAQGFARVAIANEPPYTAV
AADGKVSGAAPDVAREIFKRLGVGDIVASISEYGAMIPGLKAGRFDVVTAGLFMKPERCAAVAYSEPVLCDAEAMLVKKG
NPKGFKSYEDVAKDTSATIGAPGGGTEEKLALNAGVPRERVIVVPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDPN
LEVIAPVQGAPVYCDGAAFKKGDEALRDAYDVELAKMKKSGEFAKIIEPYGFSAAAAMSTTRDKLCSAK

Specific function: Probably part of the binding-protein-dependent transport system y4tEFGH for an amino acid [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=267, Percent_Identity=28.4644194756554, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1787085, Length=255, Percent_Identity=23.921568627451, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787088, Length=271, Percent_Identity=23.6162361623616, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014337
- InterPro:   IPR001638 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 32305; Mature: 32174

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEATTPSSRDGKPPRTNQDKKQELGTMKKLGILAGVAGLALAAVLAASIPGSADDSKLE
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QLKAQGFARVAIANEPPYTAVAADGKVSGAAPDVAREIFKRLGVGDIVASISEYGAMIPG
HHHHCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
LKAGRFDVVTAGLFMKPERCAAVAYSEPVLCDAEAMLVKKGNPKGFKSYEDVAKDTSATI
CCCCCEEEEECCCEECCHHHHEEECCCCCEECCCEEEEECCCCCCCHHHHHHHHHCCCEE
GAPGGGTEEKLALNAGVPRERVIVVPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDP
CCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCEEECCEECHHHHHHHCCCC
NLEVIAPVQGAPVYCDGAAFKKGDEALRDAYDVELAKMKKSGEFAKIIEPYGFSAAAAMS
CEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
TTRDKLCSAK
HHHHHHCCCC
>Mature Secondary Structure 
PEATTPSSRDGKPPRTNQDKKQELGTMKKLGILAGVAGLALAAVLAASIPGSADDSKLE
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
QLKAQGFARVAIANEPPYTAVAADGKVSGAAPDVAREIFKRLGVGDIVASISEYGAMIPG
HHHHCCEEEEEECCCCCCEEEECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
LKAGRFDVVTAGLFMKPERCAAVAYSEPVLCDAEAMLVKKGNPKGFKSYEDVAKDTSATI
CCCCCEEEEECCCEECCHHHHEEECCCCCEECCCEEEEECCCCCCCHHHHHHHHHCCCEE
GAPGGGTEEKLALNAGVPRERVIVVPDGQSGLKMVQDGRIDAYSLPVLSINDLMKKANDP
CCCCCCCCCEEEEECCCCCCEEEEEECCCCCHHHHHCCCCCEEECCEECHHHHHHHCCCC
NLEVIAPVQGAPVYCDGAAFKKGDEALRDAYDVELAKMKKSGEFAKIIEPYGFSAAAAMS
CEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHH
TTRDKLCSAK
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]