| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is hutH [H]
Identifier: 13475933
GI number: 13475933
Start: 5881219
End: 5882715
Strand: Reverse
Name: hutH [H]
Synonym: mll7124
Alternate gene names: 13475933
Gene position: 5882715-5881219 (Counterclockwise)
Preceding gene: 13475934
Following gene: 13475932
Centisome position: 83.61
GC content: 67.94
Gene sequence:
>1497_bases ATGACAGCCCGGATAGTACTGCTCGACGCCAAGCCGCTCGGCGTGGCTGACGTCGCCGAGATCGCACGCCGCAACGCCCG GTTGATGCTGGGCGAAGAAGCGATGCGCCGAATCCGGGCGAGCCGCGCCCTCATCGAACATCTGACCGGGCTTGGCAAAC CGATGTACGGCGTCACCACAGGCCTCGGCGCCTGTGTCGACACGCCGCTCGCGCAGGCCGACCTGATCGCCTTCCAGCAC AGCGTGCCGCTCAGCCACAGCATGGGCATCGGACCGGCGCTCCCGACAGAGGCGGTGCGGGCGCTGATGACCGCGCGCAT TTCAGGTATGGCCGCCGGTGGCACCGGCACCTCCGAACGCGTGGTGATGGGCCTTGTCGCCGCGCTCAATGCCGGCGTGC ATCCGGTGATCCCGACCTGGGGCTCGATCGGCGCGGCCGATCTTGCTCATCTCGGCCATATGGCGAGGTCGCTGCGCGGC GATGGCGAGGCGGAGTTCCAGGGCCGGATCATGCCCTCCGCCGAGGCGCTTGCCTTGGCCCGGCTCGAGCCGCTCGACCT GCGCGAAAAGGACGGCCACGCCATCATCGTCGCCAACAGCCTGTCGACCGGAACGGCGTGCCTGTACCTTGAAGACGTCG CCCATCTCATCGACTGGGCGCTGGCCGCCGTGGCGCTCAACTACGAGGCGTTCCGCTCGTCCCTCACCGCGATCGACGAA CAGGCGCTTGCCGCGCGGCCGGCCTTCGGCCAGCGCGAGATCGGCGCGCGGTTGCGCGCGGAACTAGCCGGAAGCGGCCT TTGGCAGGACAAGGCGGCACGGCGCTTGCAGGATCCGCTCAGCTATCGCTGCGTGCCGCAGGTCTGGGGTGGCCTGCTCA ATGCGTTCGAACAGGCAAGGCTAGCGACCGAGATCGAACTGACCCATTCCGGCGATAATCCCGTGATCCTGGCCGAGGGC GAACGGGTGATTTCCAACGGCAATTTCGACCTGACGGCGATGACGCTGGCCTGGGAGCAACTGGGCCAGGCGCTCGCGCA TTGCGCCGTCGGCACCGCCAATCGCTGCATGAAGCTGATGTCGCCGACAACAGCCGAACTGCCGCGCTTCCTGTCGGCCA GGGGCGGCAGCCGCCAGGGCTATGCGGAACTGCAAAAACCCTTGTCCGCGCTGGAGGCCGAAATTCGGCATCTGGCCAAC CCGATGTCACTCAGCCCGCTCGCGGTGTCGGACGGCATCGAGGATCAGTCGTCGATGGCGCCCAGGGTGGTGGCCAAAAC CGCTGAGATCGTCGAGCGCATGCGCTATCTCGTGGCGATGGAGCTGATCTTCGCGGCGACGGGTGTGGAGTTGCGCGGTG TCGTCGACACCATGGGTGAAGGGCCGCAGCGCACCTTCGCCGCCGTGCGCGCGCTCGTCAGCCCGCTCGACGACGACCGC GAGATGAGCACCGACATGACGCGGGTGGCGCGGATGGTGGCGGGTCCGCGCTGCTGA
Upstream 100 bases:
>100_bases CCAATGGGAATGGCTTGCAGTCGCGTCTGCGAGCCGTCACAAACGGCTACGCCCGTTGTAATGCTGGTCCGGGCATCTGG TCACAGGATACAGGCAAGAC
Downstream 100 bases:
>100_bases GCCGAGGGCCGATCCGCCAGGATCGGTATCCGGATTTTCCGGCGCGAACCTAGGCGTCAAGCACCAACGCGCGCGGCCCG CTACCAGGGCCATCGGTGTG
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 498; Mature: 497
Protein sequence:
>498_residues MTARIVLLDAKPLGVADVAEIARRNARLMLGEEAMRRIRASRALIEHLTGLGKPMYGVTTGLGACVDTPLAQADLIAFQH SVPLSHSMGIGPALPTEAVRALMTARISGMAAGGTGTSERVVMGLVAALNAGVHPVIPTWGSIGAADLAHLGHMARSLRG DGEAEFQGRIMPSAEALALARLEPLDLREKDGHAIIVANSLSTGTACLYLEDVAHLIDWALAAVALNYEAFRSSLTAIDE QALAARPAFGQREIGARLRAELAGSGLWQDKAARRLQDPLSYRCVPQVWGGLLNAFEQARLATEIELTHSGDNPVILAEG ERVISNGNFDLTAMTLAWEQLGQALAHCAVGTANRCMKLMSPTTAELPRFLSARGGSRQGYAELQKPLSALEAEIRHLAN PMSLSPLAVSDGIEDQSSMAPRVVAKTAEIVERMRYLVAMELIFAATGVELRGVVDTMGEGPQRTFAAVRALVSPLDDDR EMSTDMTRVARMVAGPRC
Sequences:
>Translated_498_residues MTARIVLLDAKPLGVADVAEIARRNARLMLGEEAMRRIRASRALIEHLTGLGKPMYGVTTGLGACVDTPLAQADLIAFQH SVPLSHSMGIGPALPTEAVRALMTARISGMAAGGTGTSERVVMGLVAALNAGVHPVIPTWGSIGAADLAHLGHMARSLRG DGEAEFQGRIMPSAEALALARLEPLDLREKDGHAIIVANSLSTGTACLYLEDVAHLIDWALAAVALNYEAFRSSLTAIDE QALAARPAFGQREIGARLRAELAGSGLWQDKAARRLQDPLSYRCVPQVWGGLLNAFEQARLATEIELTHSGDNPVILAEG ERVISNGNFDLTAMTLAWEQLGQALAHCAVGTANRCMKLMSPTTAELPRFLSARGGSRQGYAELQKPLSALEAEIRHLAN PMSLSPLAVSDGIEDQSSMAPRVVAKTAEIVERMRYLVAMELIFAATGVELRGVVDTMGEGPQRTFAAVRALVSPLDDDR EMSTDMTRVARMVAGPRC >Mature_497_residues TARIVLLDAKPLGVADVAEIARRNARLMLGEEAMRRIRASRALIEHLTGLGKPMYGVTTGLGACVDTPLAQADLIAFQHS VPLSHSMGIGPALPTEAVRALMTARISGMAAGGTGTSERVVMGLVAALNAGVHPVIPTWGSIGAADLAHLGHMARSLRGD GEAEFQGRIMPSAEALALARLEPLDLREKDGHAIIVANSLSTGTACLYLEDVAHLIDWALAAVALNYEAFRSSLTAIDEQ ALAARPAFGQREIGARLRAELAGSGLWQDKAARRLQDPLSYRCVPQVWGGLLNAFEQARLATEIELTHSGDNPVILAEGE RVISNGNFDLTAMTLAWEQLGQALAHCAVGTANRCMKLMSPTTAELPRFLSARGGSRQGYAELQKPLSALEAEIRHLANP MSLSPLAVSDGIEDQSSMAPRVVAKTAEIVERMRYLVAMELIFAATGVELRGVVDTMGEGPQRTFAAVRALVSPLDDDRE MSTDMTRVARMVAGPRC
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=501, Percent_Identity=28.7425149700599, Blast_Score=195, Evalue=8e-50, Organism=Caenorhabditis elegans, GI17567831, Length=504, Percent_Identity=27.3809523809524, Blast_Score=177, Evalue=8e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 53042; Mature: 52911
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARIVLLDAKPLGVADVAEIARRNARLMLGEEAMRRIRASRALIEHLTGLGKPMYGVTT CCEEEEEEECCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GLGACVDTPLAQADLIAFQHSVPLSHSMGIGPALPTEAVRALMTARISGMAAGGTGTSER HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCHHH VVMGLVAALNAGVHPVIPTWGSIGAADLAHLGHMARSLRGDGEAEFQGRIMPSAEALALA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH RLEPLDLREKDGHAIIVANSLSTGTACLYLEDVAHLIDWALAAVALNYEAFRSSLTAIDE HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAARPAFGQREIGARLRAELAGSGLWQDKAARRLQDPLSYRCVPQVWGGLLNAFEQAR HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LATEIELTHSGDNPVILAEGERVISNGNFDLTAMTLAWEQLGQALAHCAVGTANRCMKLM HHHEEEEEECCCCCEEEECCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH SPTTAELPRFLSARGGSRQGYAELQKPLSALEAEIRHLANPMSLSPLAVSDGIEDQSSMA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHCC PRVVAKTAEIVERMRYLVAMELIFAATGVELRGVVDTMGEGPQRTFAAVRALVSPLDDDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH EMSTDMTRVARMVAGPRC HHHHHHHHHHHHHCCCCC >Mature Secondary Structure TARIVLLDAKPLGVADVAEIARRNARLMLGEEAMRRIRASRALIEHLTGLGKPMYGVTT CEEEEEEECCCCCHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHH GLGACVDTPLAQADLIAFQHSVPLSHSMGIGPALPTEAVRALMTARISGMAAGGTGTSER HHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCEECCCCCCHHH VVMGLVAALNAGVHPVIPTWGSIGAADLAHLGHMARSLRGDGEAEFQGRIMPSAEALALA HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH RLEPLDLREKDGHAIIVANSLSTGTACLYLEDVAHLIDWALAAVALNYEAFRSSLTAIDE HCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QALAARPAFGQREIGARLRAELAGSGLWQDKAARRLQDPLSYRCVPQVWGGLLNAFEQAR HHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LATEIELTHSGDNPVILAEGERVISNGNFDLTAMTLAWEQLGQALAHCAVGTANRCMKLM HHHEEEEEECCCCCEEEECCCEEECCCCCCEEHHHHHHHHHHHHHHHHHCCCHHHHHHHH SPTTAELPRFLSARGGSRQGYAELQKPLSALEAEIRHLANPMSLSPLAVSDGIEDQSSMA CCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHHCC PRVVAKTAEIVERMRYLVAMELIFAATGVELRGVVDTMGEGPQRTFAAVRALVSPLDDDR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCH EMSTDMTRVARMVAGPRC HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA