| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475932
Identifier: 13475932
GI number: 13475932
Start: 5879748
End: 5880818
Strand: Reverse
Name: 13475932
Synonym: mll7123
Alternate gene names: NA
Gene position: 5880818-5879748 (Counterclockwise)
Preceding gene: 13475933
Following gene: 13475929
Centisome position: 83.58
GC content: 59.76
Gene sequence:
>1071_bases GTGGCCAACACCTACAAGGTCCATTTCGTCAGCAATCGAAACCCGATCGTGAACAGTCAGGGGCGGATCATCGGTTTCGG CCCCAATCCCAGCCAGGCCCAAGGCGTCGATCTTCGATATGGAGAGGTCCAGGTGACGGTCACCGGAGCTCCCAAGCAGG GCAAGATCGTGCCCGGCACCCTGCTTGTGTATGACGAGAAGATACTTGTCGAGAAGGGCAAGGCTCAAATTCGCGGAAGC GACCAGATGTTTGCCGCGCTTCATCCGGCATTCAGTGCGGCAAAGACGATCATCCTGTTCGCGCATGGCTTCTTCAACAC CTTTTCCGACAGCGTCGAACGTGCGGCGACGATCCTGAGCTTCTACGGAATAGATGCCGAGATCATCGTCTTCAGTTGGC CCTCTGCCGGCACATTGATCGGCTACCAGCATGACCGGGCAACATCACGACAGAGTGGCCCCGCGTTTGCCCGAGTGATC CGCAGGTTGGCGACGGAGCTTGCCGGCCTTGCCCCGACGGCGCCGCGTCCGACCGTTCACCTGCTCTGTCACAGCATGGG AAACTTTGCGCTGCGTTTTGGCGTTCAGGCATTGCTGGCGCAACCGCAAGATACAAAACCCGGCGAGGCCCAACCGGCCG TACCGGCGACGCATCTTCCGACCATCTTCAACCAAATCATTCTCGCCGCCGCCGACGAGGATTCCGATGCGTTCGACCGG CAGGACAAACTGAAGGCGCTGCCCGACCTCGGGCGTGGGGTTACCGTCTACTACACCCATGAGGATTGGGTGCTGACCTT CTTGAGCGCTGCAATTGAATTCAACGGCCCCCGGCTTGGCGCCGGAGGCCCCGACAACATGGCAACCATCAGCGACAAGG TGAGTGCGGTGGACGTGAGCGCCGTTGTTCCAGCCGAACTCAACATGAATAGCCATCAATATTATCGGCTCTACACGCCG GTGCGCGACGATGAAGTCGCGGTGCTGGCAGGTCAAGCGCCCGATAAAATCCGCAACCGGGCAGCGACAGGCGTTCCACA CCGATATCGGATCGAGCCTGCGGTGGGTTAA
Upstream 100 bases:
>100_bases GGGCCCGGGTATGCGGTTCGCAGACAAGATTGTGCCGCCCTGGAGTGAATTGCCGAACGTTTGCCTGATCTGACACCCCT GATCCTGTCCGGAGGAACCT
Downstream 100 bases:
>100_bases ATATTGAAGATTGCGGCGGAGTGTCTCGCTCAGACCTGCTGCCGTGACAACCCGCGGCGACAGCGTGATGTTATTGATAA GGACCTCTGAGGTTGAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MANTYKVHFVSNRNPIVNSQGRIIGFGPNPSQAQGVDLRYGEVQVTVTGAPKQGKIVPGTLLVYDEKILVEKGKAQIRGS DQMFAALHPAFSAAKTIILFAHGFFNTFSDSVERAATILSFYGIDAEIIVFSWPSAGTLIGYQHDRATSRQSGPAFARVI RRLATELAGLAPTAPRPTVHLLCHSMGNFALRFGVQALLAQPQDTKPGEAQPAVPATHLPTIFNQIILAAADEDSDAFDR QDKLKALPDLGRGVTVYYTHEDWVLTFLSAAIEFNGPRLGAGGPDNMATISDKVSAVDVSAVVPAELNMNSHQYYRLYTP VRDDEVAVLAGQAPDKIRNRAATGVPHRYRIEPAVG
Sequences:
>Translated_356_residues MANTYKVHFVSNRNPIVNSQGRIIGFGPNPSQAQGVDLRYGEVQVTVTGAPKQGKIVPGTLLVYDEKILVEKGKAQIRGS DQMFAALHPAFSAAKTIILFAHGFFNTFSDSVERAATILSFYGIDAEIIVFSWPSAGTLIGYQHDRATSRQSGPAFARVI RRLATELAGLAPTAPRPTVHLLCHSMGNFALRFGVQALLAQPQDTKPGEAQPAVPATHLPTIFNQIILAAADEDSDAFDR QDKLKALPDLGRGVTVYYTHEDWVLTFLSAAIEFNGPRLGAGGPDNMATISDKVSAVDVSAVVPAELNMNSHQYYRLYTP VRDDEVAVLAGQAPDKIRNRAATGVPHRYRIEPAVG >Mature_355_residues ANTYKVHFVSNRNPIVNSQGRIIGFGPNPSQAQGVDLRYGEVQVTVTGAPKQGKIVPGTLLVYDEKILVEKGKAQIRGSD QMFAALHPAFSAAKTIILFAHGFFNTFSDSVERAATILSFYGIDAEIIVFSWPSAGTLIGYQHDRATSRQSGPAFARVIR RLATELAGLAPTAPRPTVHLLCHSMGNFALRFGVQALLAQPQDTKPGEAQPAVPATHLPTIFNQIILAAADEDSDAFDRQ DKLKALPDLGRGVTVYYTHEDWVLTFLSAAIEFNGPRLGAGGPDNMATISDKVSAVDVSAVVPAELNMNSHQYYRLYTPV RDDEVAVLAGQAPDKIRNRAATGVPHRYRIEPAVG
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38489; Mature: 38358
Theoretical pI: Translated: 7.86; Mature: 7.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANTYKVHFVSNRNPIVNSQGRIIGFGPNPSQAQGVDLRYGEVQVTVTGAPKQGKIVPGT CCCEEEEEEECCCCCEECCCCCEEEECCCCCCCCCCEEEECEEEEEEECCCCCCCCCCCE LLVYDEKILVEKGKAQIRGSDQMFAALHPAFSAAKTIILFAHGFFNTFSDSVERAATILS EEEECCEEEEECCCEEECCCCHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHH FYGIDAEIIVFSWPSAGTLIGYQHDRATSRQSGPAFARVIRRLATELAGLAPTAPRPTVH HCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH LLCHSMGNFALRFGVQALLAQPQDTKPGEAQPAVPATHLPTIFNQIILAAADEDSDAFDR HHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHCH QDKLKALPDLGRGVTVYYTHEDWVLTFLSAAIEFNGPRLGAGGPDNMATISDKVSAVDVS HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEE AVVPAELNMNSHQYYRLYTPVRDDEVAVLAGQAPDKIRNRAATGVPHRYRIEPAVG EECCCEECCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC >Mature Secondary Structure ANTYKVHFVSNRNPIVNSQGRIIGFGPNPSQAQGVDLRYGEVQVTVTGAPKQGKIVPGT CCEEEEEEECCCCCEECCCCCEEEECCCCCCCCCCEEEECEEEEEEECCCCCCCCCCCE LLVYDEKILVEKGKAQIRGSDQMFAALHPAFSAAKTIILFAHGFFNTFSDSVERAATILS EEEECCEEEEECCCEEECCCCHHHHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHHHHHH FYGIDAEIIVFSWPSAGTLIGYQHDRATSRQSGPAFARVIRRLATELAGLAPTAPRPTVH HCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHH LLCHSMGNFALRFGVQALLAQPQDTKPGEAQPAVPATHLPTIFNQIILAAADEDSDAFDR HHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCHHCH QDKLKALPDLGRGVTVYYTHEDWVLTFLSAAIEFNGPRLGAGGPDNMATISDKVSAVDVS HHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEEE AVVPAELNMNSHQYYRLYTPVRDDEVAVLAGQAPDKIRNRAATGVPHRYRIEPAVG EECCCEECCCCCEEEEEECCCCCCCEEEEECCCCHHHHHHHCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA