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The map label for this gene is ydfH [C]

Identifier: 13475908

GI number: 13475908

Start: 5853041

End: 5853727

Strand: Direct

Name: ydfH [C]

Synonym: mlr7090

Alternate gene names: 13475908

Gene position: 5853041-5853727 (Clockwise)

Preceding gene: 13475904

Following gene: 13475909

Centisome position: 83.19

GC content: 62.74

Gene sequence:

>687_bases
GTGGCGGGCAAAGCAAAAACTGACTCCTCTCCCCTCGTGGCGGCCGCCCGCATGAGCGATATCGCCTATGAACGGATCCT
GGAGGGCTTGTTCGACCGACGCGTTCCGGCCGGGGCATTCATCTCGCAAAACGAGTTGTCCGCGATCGTCGACGTGCCTG
TCGCCCCGCTTCGCGACGCCCTGCGTGTTCTTGAAGCGGAAGGGATCCTGACCATCCACCCGCGCTCCGGCATCCAGTTC
GTCAGGCCCGGACTGGAGCTTACGCGTGCCACCTACCAGTTCCGTTCCATCGTTGAGCGCGCCGCGGTCCGTGTCTTTGC
GGAACAGGGCGATGAAGCCGTCATGAATGCCTTGGAAATCCGGCATTCCAGGCTGCTTCGACGCGTCGAGCGCGATGGTC
TCGGAAAGGAACAACTGGAGGAGATGGACGCGCTGGAGGGAGAGTTGCACGGCGCGGTCATCGCCGCGCTGCGCAATCCC
CTGATCGACAGCACCTACCGGCGCATGCACAATTATCTGCGTCTGCTGCGGCTCGACAGGAAGATCACGACGCCGATCAT
GGTCCGGACACTCAAGGAGCATCTCGACATCCTCGAGGCTTGCGGCACAAGGAATGCCGACGCCGCCGAGGCAAAACTGC
AGGCGCATTTCCAGGCGGCGATGCAGCGAAGCCTGGGTCTCGTCTGA

Upstream 100 bases:

>100_bases
AAAATGCGAAAGGCTCATCACAGGGGCTTTCTGATCGGTTACGATATCCAACTGATCTATCAGATGGTATCTAACTACCG
GACCAATGGAGGGGCCGCAA

Downstream 100 bases:

>100_bases
CAGGTCAATGGTAATCCGTCGTTTTGCCCAGTTGCGCGCCGGTGCGGTTGCATGGCGTGGGAAAGGATGCTACCCAAACT
TCAACTGATCGATCAGATTG

Product: transcriptional regulator

Products: NA

Alternate protein names: GntR Family Transcriptional Regulator; Transcriptional Regulator GntR Family; Transcriptional Regulator Protein; GntR Family Regulatory Protein; Transcriptional Regulator GntR Family Protein

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAGKAKTDSSPLVAAARMSDIAYERILEGLFDRRVPAGAFISQNELSAIVDVPVAPLRDALRVLEAEGILTIHPRSGIQF
VRPGLELTRATYQFRSIVERAAVRVFAEQGDEAVMNALEIRHSRLLRRVERDGLGKEQLEEMDALEGELHGAVIAALRNP
LIDSTYRRMHNYLRLLRLDRKITTPIMVRTLKEHLDILEACGTRNADAAEAKLQAHFQAAMQRSLGLV

Sequences:

>Translated_228_residues
MAGKAKTDSSPLVAAARMSDIAYERILEGLFDRRVPAGAFISQNELSAIVDVPVAPLRDALRVLEAEGILTIHPRSGIQF
VRPGLELTRATYQFRSIVERAAVRVFAEQGDEAVMNALEIRHSRLLRRVERDGLGKEQLEEMDALEGELHGAVIAALRNP
LIDSTYRRMHNYLRLLRLDRKITTPIMVRTLKEHLDILEACGTRNADAAEAKLQAHFQAAMQRSLGLV
>Mature_227_residues
AGKAKTDSSPLVAAARMSDIAYERILEGLFDRRVPAGAFISQNELSAIVDVPVAPLRDALRVLEAEGILTIHPRSGIQFV
RPGLELTRATYQFRSIVERAAVRVFAEQGDEAVMNALEIRHSRLLRRVERDGLGKEQLEEMDALEGELHGAVIAALRNPL
IDSTYRRMHNYLRLLRLDRKITTPIMVRTLKEHLDILEACGTRNADAAEAKLQAHFQAAMQRSLGLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25443; Mature: 25312

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGKAKTDSSPLVAAARMSDIAYERILEGLFDRRVPAGAFISQNELSAIVDVPVAPLRDA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHH
LRVLEAEGILTIHPRSGIQFVRPGLELTRATYQFRSIVERAAVRVFAEQGDEAVMNALEI
HHHHHHCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RHSRLLRRVERDGLGKEQLEEMDALEGELHGAVIAALRNPLIDSTYRRMHNYLRLLRLDR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KITTPIMVRTLKEHLDILEACGTRNADAAEAKLQAHFQAAMQRSLGLV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
AGKAKTDSSPLVAAARMSDIAYERILEGLFDRRVPAGAFISQNELSAIVDVPVAPLRDA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHH
LRVLEAEGILTIHPRSGIQFVRPGLELTRATYQFRSIVERAAVRVFAEQGDEAVMNALEI
HHHHHHCCEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RHSRLLRRVERDGLGKEQLEEMDALEGELHGAVIAALRNPLIDSTYRRMHNYLRLLRLDR
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
KITTPIMVRTLKEHLDILEACGTRNADAAEAKLQAHFQAAMQRSLGLV
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA