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The map label for this gene is ycjN [C]

Identifier: 13475909

GI number: 13475909

Start: 5853855

End: 5855093

Strand: Direct

Name: ycjN [C]

Synonym: mlr7091

Alternate gene names: 13475909

Gene position: 5853855-5855093 (Clockwise)

Preceding gene: 13475908

Following gene: 13475910

Centisome position: 83.2

GC content: 61.74

Gene sequence:

>1239_bases
ATGCAGTTGAACAAGAGGCAGTTTCTCATGGGTTCGGCGGCCCTGGCGATGGCAGGGCATATTCGCGGTGCCCGCGCGGC
GAGTGCCATCAGTTACTGGCACCATTTCACCAGCCAGTCGGAAATGGCCAGCCTGCTGAAGATCATCGGATTGTTTCAGG
CGGCGAATGCCGATGTGGTGGTGACGCAGGAGAACATCCCGAACTCCGAATATATGGCGAAGGTCTCTTCGGCCGTGCTG
GCCGGTGGCCGTCCGGATACCGCCATGGTGATCGCCGAGCGTTTCGCTGATCTTACCGCGATGGAGGGGTTGATCGATCT
TACCGATCGGGTGAACGGGTGGAAGGGCAAGGCCAATTTCCCCGAGAATCGCTGGACCGGGCTTTCCAGCAACGGCGCGA
TCTATGCGGTTCCCGCCTTCGCCTTCGTCGATTGGATGTACTACCGCGCAGACTATTTCGAGGAGGCCGGGCTGGCCGGG
CCGCCCCGGAATTTCGACGAATTCCTGAGCGCCTGCCGCAAGCTGACCGATCCGTCGAAGGGTAGATATGCCTTCGGCAT
GCGCGCCGGCGCCGGCGGTTTCAAATATGTTATCGATGTCATGGAGGCGTTCGGCTCGCCGATCGTCAAGGATGGGCAGC
CAGCCATCGACAGGGCCGCGGCGATCGAGGCCATAACATTCTATTCCGATCTCTTCCTGAAGGAAAAGGTCGTGCCGCCG
AGCGCGCCCAACGACAGTTACCGCCAGATCATGGAGGGCTTCCGCACCGGGCAGACGGCAATGGTGTGGCACCACACCGG
TTCGCTGAATGAAATCTCGGCCGCCATGAAGCAGGGCAAACAGTTCTCGACCGCACCCATGCCGGCCGGTCCGAAGGCGC
ATGTCGCTCGCGTTGCCTACGCCGGCAATGGCATCATGAAGGAAGACAATATAGAGGCCGCCTGGCGCTGGGTGAGTTTC
TGGGGCCAGACCGATGCTGCCCTGACCTTGCTCGAAGGCACGGGCTATTTCCCGGCCTCCGCCGCTGCCCTGCAAGATCC
GCGGATCACCGGCAATCCAATCTATCACGCGGCGGTCGAAACGCTGGAGTTCGGACGTCTGCCGAACAATTTCGTGGGCG
CGGCGGGCTGGTCCGAAAATGTCGTCAACCCCGCTTTCCAAGCGGTGCTCACTGGCCAGTCGACACCGGAGCAGGCCGTG
GACCGTATGATCCAGGGCCTCGAGGCCGCCCTTCGCTGA

Upstream 100 bases:

>100_bases
CCAGTTGCGCGCCGGTGCGGTTGCATGGCGTGGGAAAGGATGCTACCCAAACTTCAACTGATCGATCAGATTGATGATCT
GATATCTTGGAGGAGATCGC

Downstream 100 bases:

>100_bases
TACATCCCTGCCCGGCCTCCTCCGGCCTGCGGCCATGCTTTGAACGCAACGGGACGATGCTTTCGCATCGCGGATCCATG
ACACCAAGCTCGAGCGGATA

Product: sugar ABC transporter, periplasmic binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MQLNKRQFLMGSAALAMAGHIRGARAASAISYWHHFTSQSEMASLLKIIGLFQAANADVVVTQENIPNSEYMAKVSSAVL
AGGRPDTAMVIAERFADLTAMEGLIDLTDRVNGWKGKANFPENRWTGLSSNGAIYAVPAFAFVDWMYYRADYFEEAGLAG
PPRNFDEFLSACRKLTDPSKGRYAFGMRAGAGGFKYVIDVMEAFGSPIVKDGQPAIDRAAAIEAITFYSDLFLKEKVVPP
SAPNDSYRQIMEGFRTGQTAMVWHHTGSLNEISAAMKQGKQFSTAPMPAGPKAHVARVAYAGNGIMKEDNIEAAWRWVSF
WGQTDAALTLLEGTGYFPASAAALQDPRITGNPIYHAAVETLEFGRLPNNFVGAAGWSENVVNPAFQAVLTGQSTPEQAV
DRMIQGLEAALR

Sequences:

>Translated_412_residues
MQLNKRQFLMGSAALAMAGHIRGARAASAISYWHHFTSQSEMASLLKIIGLFQAANADVVVTQENIPNSEYMAKVSSAVL
AGGRPDTAMVIAERFADLTAMEGLIDLTDRVNGWKGKANFPENRWTGLSSNGAIYAVPAFAFVDWMYYRADYFEEAGLAG
PPRNFDEFLSACRKLTDPSKGRYAFGMRAGAGGFKYVIDVMEAFGSPIVKDGQPAIDRAAAIEAITFYSDLFLKEKVVPP
SAPNDSYRQIMEGFRTGQTAMVWHHTGSLNEISAAMKQGKQFSTAPMPAGPKAHVARVAYAGNGIMKEDNIEAAWRWVSF
WGQTDAALTLLEGTGYFPASAAALQDPRITGNPIYHAAVETLEFGRLPNNFVGAAGWSENVVNPAFQAVLTGQSTPEQAV
DRMIQGLEAALR
>Mature_412_residues
MQLNKRQFLMGSAALAMAGHIRGARAASAISYWHHFTSQSEMASLLKIIGLFQAANADVVVTQENIPNSEYMAKVSSAVL
AGGRPDTAMVIAERFADLTAMEGLIDLTDRVNGWKGKANFPENRWTGLSSNGAIYAVPAFAFVDWMYYRADYFEEAGLAG
PPRNFDEFLSACRKLTDPSKGRYAFGMRAGAGGFKYVIDVMEAFGSPIVKDGQPAIDRAAAIEAITFYSDLFLKEKVVPP
SAPNDSYRQIMEGFRTGQTAMVWHHTGSLNEISAAMKQGKQFSTAPMPAGPKAHVARVAYAGNGIMKEDNIEAAWRWVSF
WGQTDAALTLLEGTGYFPASAAALQDPRITGNPIYHAAVETLEFGRLPNNFVGAAGWSENVVNPAFQAVLTGQSTPEQAV
DRMIQGLEAALR

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1787569, Length=377, Percent_Identity=22.2811671087533, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44672; Mature: 44672

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNKRQFLMGSAALAMAGHIRGARAASAISYWHHFTSQSEMASLLKIIGLFQAANADVV
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
VTQENIPNSEYMAKVSSAVLAGGRPDTAMVIAERFADLTAMEGLIDLTDRVNGWKGKANF
EECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PENRWTGLSSNGAIYAVPAFAFVDWMYYRADYFEEAGLAGPPRNFDEFLSACRKLTDPSK
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
GRYAFGMRAGAGGFKYVIDVMEAFGSPIVKDGQPAIDRAAAIEAITFYSDLFLKEKVVPP
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SAPNDSYRQIMEGFRTGQTAMVWHHTGSLNEISAAMKQGKQFSTAPMPAGPKAHVARVAY
CCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEE
AGNGIMKEDNIEAAWRWVSFWGQTDAALTLLEGTGYFPASAAALQDPRITGNPIYHAAVE
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH
TLEFGRLPNNFVGAAGWSENVVNPAFQAVLTGQSTPEQAVDRMIQGLEAALR
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQLNKRQFLMGSAALAMAGHIRGARAASAISYWHHFTSQSEMASLLKIIGLFQAANADVV
CCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE
VTQENIPNSEYMAKVSSAVLAGGRPDTAMVIAERFADLTAMEGLIDLTDRVNGWKGKANF
EECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PENRWTGLSSNGAIYAVPAFAFVDWMYYRADYFEEAGLAGPPRNFDEFLSACRKLTDPSK
CCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
GRYAFGMRAGAGGFKYVIDVMEAFGSPIVKDGQPAIDRAAAIEAITFYSDLFLKEKVVPP
CCEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
SAPNDSYRQIMEGFRTGQTAMVWHHTGSLNEISAAMKQGKQFSTAPMPAGPKAHVARVAY
CCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCHHHHEEEEE
AGNGIMKEDNIEAAWRWVSFWGQTDAALTLLEGTGYFPASAAALQDPRITGNPIYHAAVE
CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHH
TLEFGRLPNNFVGAAGWSENVVNPAFQAVLTGQSTPEQAVDRMIQGLEAALR
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA