Click here to switch to the map view.

The map label for this gene is ntaR [H]

Identifier: 13475881

GI number: 13475881

Start: 5822252

End: 5822944

Strand: Reverse

Name: ntaR [H]

Synonym: mll7060

Alternate gene names: 13475881

Gene position: 5822944-5822252 (Counterclockwise)

Preceding gene: 13475891

Following gene: 13475880

Centisome position: 82.76

GC content: 66.81

Gene sequence:

>693_bases
TTGTCGGGAAAGCGCAGCTTGATCCGGTCGGGCACGACCGTCGATCAGATGGTGAGGGCGATCGGCGACCGCATCGTCAC
CGGCGCGCTGCGTCCGGGCGAAAAACTCGACGAGGTCTCGCTTGCCGCCCGCTTCGAGGTTTCACGCACGCCGGTGCGTG
AGGCGCTCGGCCAGCTCAGCGCCATGGGCCTGGTCGAGCGGCGGCCCAACAGGGGTGCTATCGTTGCCGTCGTGACGCAG
GAACACCTCGCCTCGATGTTCGAGAGCATGGCCGAACTGGAATCGATCTGCGCGCGCTTCTCGGCCGAGCGGATGACCAG
CAGCGAGCGTCGTGGGCTCGAGATCGAGCACCAAGCCTCGGGGCGAATGGTGCAGCTGGGCGCCGAGGAGGACTATGAGT
ATTTCAACACCGAGTTCCATAGCCGGCTCTATCGCGGCGCCCACAGCACGCACATCCAGGAGCTGACCGCGACGACGCGC
AGCCGGCTGGCCCCCTTCCGCCGCGCCCAGTTCAGGCTGCCCGGACGGCTGGCCAAATCCTGGCAGGAACACGACCTAAT
CGTCACCGCAATCATGCGCGGAGACAGCGTGGCTGCGGGCAAGGCCGCCAGGGACCATGTCTCTATCGTCAGCGAGGCGA
GCGCGGTGTTCGCGGCGGATGATCGCAAGCCAACTCGGCGGGACGTGGCCTGA

Upstream 100 bases:

>100_bases
GGCAGATTAAAATATAGGCATAGAGGGTATGGCCTGAGTCGGGATCGTTCCCGGTCGGCCACTGAGACCTGAGGTCCGAG
ACACGGGAGGCGAAGCAGAT

Downstream 100 bases:

>100_bases
AAATTTCCGGACAGCCCGAATGTCCGCAGATGATGTCGCCTCCGGGGGAGCCCAACGGCCCGACAACGTCATTTTCATAT
TCGCGGCGACACCGGGCGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MSGKRSLIRSGTTVDQMVRAIGDRIVTGALRPGEKLDEVSLAARFEVSRTPVREALGQLSAMGLVERRPNRGAIVAVVTQ
EHLASMFESMAELESICARFSAERMTSSERRGLEIEHQASGRMVQLGAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTR
SRLAPFRRAQFRLPGRLAKSWQEHDLIVTAIMRGDSVAAGKAARDHVSIVSEASAVFAADDRKPTRRDVA

Sequences:

>Translated_230_residues
MSGKRSLIRSGTTVDQMVRAIGDRIVTGALRPGEKLDEVSLAARFEVSRTPVREALGQLSAMGLVERRPNRGAIVAVVTQ
EHLASMFESMAELESICARFSAERMTSSERRGLEIEHQASGRMVQLGAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTR
SRLAPFRRAQFRLPGRLAKSWQEHDLIVTAIMRGDSVAAGKAARDHVSIVSEASAVFAADDRKPTRRDVA
>Mature_229_residues
SGKRSLIRSGTTVDQMVRAIGDRIVTGALRPGEKLDEVSLAARFEVSRTPVREALGQLSAMGLVERRPNRGAIVAVVTQE
HLASMFESMAELESICARFSAERMTSSERRGLEIEHQASGRMVQLGAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTRS
RLAPFRRAQFRLPGRLAKSWQEHDLIVTAIMRGDSVAAGKAARDHVSIVSEASAVFAADDRKPTRRDVA

Specific function: Probable regulator for the expression of the NTA monooxygenase subunits [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI48994955, Length=213, Percent_Identity=29.1079812206573, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1787821, Length=203, Percent_Identity=28.0788177339901, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011711
- InterPro:   IPR000524
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07729 FCD; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 25524; Mature: 25393

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGKRSLIRSGTTVDQMVRAIGDRIVTGALRPGEKLDEVSLAARFEVSRTPVREALGQLS
CCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
AMGLVERRPNRGAIVAVVTQEHLASMFESMAELESICARFSAERMTSSERRGLEIEHQAS
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GRMVQLGAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTRSRLAPFRRAQFRLPGRLAKS
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHH
WQEHDLIVTAIMRGDSVAAGKAARDHVSIVSEASAVFAADDRKPTRRDVA
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCC
>Mature Secondary Structure 
SGKRSLIRSGTTVDQMVRAIGDRIVTGALRPGEKLDEVSLAARFEVSRTPVREALGQLS
CCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
AMGLVERRPNRGAIVAVVTQEHLASMFESMAELESICARFSAERMTSSERRGLEIEHQAS
HHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GRMVQLGAEEDYEYFNTEFHSRLYRGAHSTHIQELTATTRSRLAPFRRAQFRLPGRLAKS
CCEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHH
WQEHDLIVTAIMRGDSVAAGKAARDHVSIVSEASAVFAADDRKPTRRDVA
HHHCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA