Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475880

Identifier: 13475880

GI number: 13475880

Start: 5821250

End: 5821900

Strand: Reverse

Name: 13475880

Synonym: mll7059

Alternate gene names: NA

Gene position: 5821900-5821250 (Counterclockwise)

Preceding gene: 13475881

Following gene: 13475875

Centisome position: 82.74

GC content: 62.67

Gene sequence:

>651_bases
ATGGTTGGCGCATCGACCGTTACGGAAAAAGACCTGTCGCTCGGTAGGCCCGGATCGTCCAACATGTCGCAGATCTCTGC
GCGCGAGGACTCCAAGAGTCATGCGGCGCGCGATCACTGGATCGCCGAGCGGATCTTCGACTGGTTGGGCGTTCCCACCA
TCCATCTGCGGCTGACCTTCTTCTCGCAATGGCTGCTCTACCCGTTTGCACGCAAGACGATCGTCGAACAGAGCGTCATC
GACTTGCCCTATGGCGCTGGCCGTCATGCTCCCATCGCTGCCGAGGACCAGGCCCGCCTGATCGCAGCGCTGCTGGCCGA
TCCGGCCGCCCATGTCGGCAAGACCTACACGCTTCATGGGCCGACCGAGCTTGATCAGCCGGGCATCGCCTCAGCCCTCA
GCGAGGTGCTCGGCCGCAAGATCGGCTATCAGCCGCTGACCATCCCCGCCTATCGCGATCGCCTGGAAAAGTTCGGCCTG
CCGGAATTTTTGATCCAGCATTTCTGTGCGATCGCCCTCGATTACCAGAACGGCATCTTCTCGGGCGCCGACAAGATCAT
CGCCGAAGTGACGCGCGCGCCGCCGATGACCGTTCAGGACTTCGTCACGTCGCACCGGGCCGCCTTCAATACGCTGGACG
CGGCGGCATAA

Upstream 100 bases:

>100_bases
AAAACCAATGGTCATGGCAGATCCGGAGAACGCATTAAGGTTGTTGATTTTATTGGGTTTTTCGCGGACCAAAATCAGAA
ATCTTCCCGTATCGTTCCGC

Downstream 100 bases:

>100_bases
GCCACTCCGGCGTCGCCCGACGGAACATCGGAACACTGGGTCGGAAGCACCTCTAAAGCGTTGATAAATAACGACAATGG
TGGGTCCGGAGGGTTGGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: Hydroxylase; Nucleoside-Diphosphate Sugar Epimerase; NmrA-Like

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI
DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL
PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA

Sequences:

>Translated_216_residues
MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI
DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL
PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA
>Mature_216_residues
MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTFFSQWLLYPFARKTIVEQSVI
DLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHGPTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGL
PEFLIQHFCAIALDYQNGIFSGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23666; Mature: 23666

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTF
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
FSQWLLYPFARKTIVEQSVIDLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCEEEECC
PTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGLPEFLIQHFCAIALDYQNGIF
CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
SGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVGASTVTEKDLSLGRPGSSNMSQISAREDSKSHAARDHWIAERIFDWLGVPTIHLRLTF
CCCCCCCCHHHHCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
FSQWLLYPFARKTIVEQSVIDLPYGAGRHAPIAAEDQARLIAALLADPAAHVGKTYTLHG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHCCEEEECC
PTELDQPGIASALSEVLGRKIGYQPLTIPAYRDRLEKFGLPEFLIQHFCAIALDYQNGIF
CCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCH
SGADKIIAEVTRAPPMTVQDFVTSHRAAFNTLDAAA
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA