Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13475838

Identifier: 13475838

GI number: 13475838

Start: 5772937

End: 5774775

Strand: Reverse

Name: 13475838

Synonym: mll7009

Alternate gene names: NA

Gene position: 5774775-5772937 (Counterclockwise)

Preceding gene: 13475839

Following gene: 13475836

Centisome position: 82.07

GC content: 66.07

Gene sequence:

>1839_bases
ATGACCACGGATCGCTTCCTCCTTTGCGGCACGCACGCGGCGGAGACCGAACCGGTCCGGTTGATCGCCGGCCCGCTCAG
CGCCGAATTCGTCAACGGCAATCTGCGCACAATCCGCCATGGCGGCACCGAGGTGCTGCGCGCCATCGCCTATATCGTGC
GCGACCGCGACTGGGGCACCTACGAACCCGCGCTGACGAACCTGACCATCGATCAGGGTGCCGATGCTTTCTCCGTCAGC
TATGCGGCAAGCTGCGCCGGGCCGGGCGGAAGCCGGCTCGCCTTCCACGCCACCATCAAAGGCTCCTCTGATGGGCAGCT
GGTGTTCGACGTCAACGCGCTGCCCGAAAGTGATTTCGAGACCAACCGCTGCGGCTTCTGCATCCTGCATCCGATTGCCG
GCCTCGCCGGCAGCCAGGTGACGGTGGAGCACACCGATGGCAGCGTGGTGGCGACGACACTGCCTGACCTGATCGACCCG
TGGCAGCCTTTTAGGGATTTGCGCGCCATCACGCATGAAGTGCGGCCCGGCGTCACCGCCGAGTGCCGCATGGAAGGCGA
CGTTTTCGAAATGGAAGACCAGCGCAACTGGTCCGACGCCTCCTACAAGACCTATGTGCGGCCGTTGGCGCTGCCGTGGC
CCTATGTGCTGCCGGCCGGCGAGACCAACCGCCAGACGATCAGCCTGCGCATTGCCAGTGACGACAACACACCGGCCTCC
ACCGAGGCATCCGGCGCGATCCGTGTGACGCTCGGCGAGCCCGGTCCGGCGCTGCCGGATGTCGGCGTGATCATCTATCC
CGACGATGTCGAGACGGCGCTGGCGAACCTCCCAACACTGTCGGCGCTCGGCCCGCAGCAACTGCTGCTTCATTACGATC
CGACGGGCGGCCATGGGCTCGATGCCTTGCGCGCTTTCGCCCGGCTCGCCGCCGCTTATCCCGCCCGCACAACGCTCGAA
TGCGTGGTCGCCTGCCGCGGCGATCTCGATGCTGAACTCGCAGAGGTCGCCGACATGGTGCGCCGGGCAAATCTGCGGCT
CGACGCCATCGCGGTTTCGCCTTCGGTTGACCGGCAGTCGACACCGCCGGGGAGTGCCTGGCCGCCCTGCCCGCCGCTGG
AAGATGTCTATGCCGCGGCACGCCGCGCCTTTCCCGACATCCGTCTCGGCGGCGGCATGTTCAGTTATTTCACCGAGCTC
AACCGCAAGCGCGTTCCGGCCGGGCCGCTCGATTTCATCACGCATTGCACCTGCCCGATCGTACACGCCGCCGACGATCT
CAGCGTCATGCAGTCGCTCGAGGCGTTGCCGTTCATCACGCGGTCGGCGCGGACGATCTTCGGCGACAAGCCCTACCGGA
TCGGACCTTCGACCATTGCCATGCGGCAGAACCCTTATGGCGGTGCCACCAAGGACAATCCGCGGGGAGAGCGCATCGCC
ATGGCGAACCGCGACCCGCGCCAGAATGGCCAGTTCGCCGCCGCCTGGACCATCGGCTATGCCGCGCGTGTCGCGCCGGC
CGGCCTGGAGATGCTGACGCTGTCCGGCTTCACCGGGCAATTCGGCGTGCTGGCTGCATCCGGGGAACCCGTTGCGGAAG
GCTCATTCCGGCCGGTCTTCCAGACTATCAAGGGGCTTTGCGAACTGGCTGGCCTTAAACATGTCACGGCCAAAACGAGC
GATGAGACCCGGGTATTGGCGTTGGCCGGTCGCTCATCCTCGGGCGAGACGGTCGTGTGGCTGACGAACCTGACGGCAAG
CGACGTGGCGGTCGACCTTTCGGAGTTTGGCCGAGGCCATCTTGTTATGGCACCCTACGCGATCGCGCGGATCGGCTGA

Upstream 100 bases:

>100_bases
CGACGTCCGGCGCCGACAACCTCAAGACATTCGCGCTGGTCGAGGCTGCCTATATCGGCGCCGCAAGCCGGCAACCGGTG
CAGATCGACGACCTGCTGAA

Downstream 100 bases:

>100_bases
ATCAGATTACTTTTCAGAATTCATCACATAGAGGGCGCGCGAGCGCTCCAGATGCTTGATCATCGCCTTCTCGGCGCCAT
CGGCATCTTTCTTCTCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 612; Mature: 611

Protein sequence:

>612_residues
MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVS
YAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDP
WQPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS
TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLE
CVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTEL
NRKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA
MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTS
DETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG

Sequences:

>Translated_612_residues
MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVS
YAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDP
WQPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS
TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLE
CVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTEL
NRKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA
MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTS
DETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG
>Mature_611_residues
TTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVSY
AASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPW
QPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAST
EASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLEC
VVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELN
RKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIAM
ANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTSD
ETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 65500; Mature: 65369

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGT
CCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCC
YEPALTNLTIDQGADAFSVSYAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFE
CCCCEEEEECCCCCCEEEEEEEHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCC
TNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPWQPFRDLRAITHEVRPGVTA
CCCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEE
ECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS
EEEECCCEEEECCCCCCCCCCHHHHCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCC
TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGL
CCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH
DALRAFARLAAAYPARTTLECVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQS
HHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
TPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELNRKRVPAGPLDFITHCTCPI
CCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCE
VHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA
EECCCHHHHHHHHHHCHHHHHCCHHHCCCCCCEECCCEEEEECCCCCCCCCCCCCCCEEE
MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVF
ECCCCCCCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHH
QTIKGLCELAGLKHVTAKTSDETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGH
HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHEEEHHHCCCCC
LVMAPYAIARIG
EEECCHHHEECC
>Mature Secondary Structure 
TTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGT
CCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCC
YEPALTNLTIDQGADAFSVSYAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFE
CCCCEEEEECCCCCCEEEEEEEHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCC
TNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPWQPFRDLRAITHEVRPGVTA
CCCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEE
ECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS
EEEECCCEEEECCCCCCCCCCHHHHCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCC
TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGL
CCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH
DALRAFARLAAAYPARTTLECVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQS
HHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC
TPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELNRKRVPAGPLDFITHCTCPI
CCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCE
VHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA
EECCCHHHHHHHHHHCHHHHHCCHHHCCCCCCEECCCEEEEECCCCCCCCCCCCCCCEEE
MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVF
ECCCCCCCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHH
QTIKGLCELAGLKHVTAKTSDETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGH
HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHEEEHHHCCCCC
LVMAPYAIARIG
EEECCHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA