| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475838
Identifier: 13475838
GI number: 13475838
Start: 5772937
End: 5774775
Strand: Reverse
Name: 13475838
Synonym: mll7009
Alternate gene names: NA
Gene position: 5774775-5772937 (Counterclockwise)
Preceding gene: 13475839
Following gene: 13475836
Centisome position: 82.07
GC content: 66.07
Gene sequence:
>1839_bases ATGACCACGGATCGCTTCCTCCTTTGCGGCACGCACGCGGCGGAGACCGAACCGGTCCGGTTGATCGCCGGCCCGCTCAG CGCCGAATTCGTCAACGGCAATCTGCGCACAATCCGCCATGGCGGCACCGAGGTGCTGCGCGCCATCGCCTATATCGTGC GCGACCGCGACTGGGGCACCTACGAACCCGCGCTGACGAACCTGACCATCGATCAGGGTGCCGATGCTTTCTCCGTCAGC TATGCGGCAAGCTGCGCCGGGCCGGGCGGAAGCCGGCTCGCCTTCCACGCCACCATCAAAGGCTCCTCTGATGGGCAGCT GGTGTTCGACGTCAACGCGCTGCCCGAAAGTGATTTCGAGACCAACCGCTGCGGCTTCTGCATCCTGCATCCGATTGCCG GCCTCGCCGGCAGCCAGGTGACGGTGGAGCACACCGATGGCAGCGTGGTGGCGACGACACTGCCTGACCTGATCGACCCG TGGCAGCCTTTTAGGGATTTGCGCGCCATCACGCATGAAGTGCGGCCCGGCGTCACCGCCGAGTGCCGCATGGAAGGCGA CGTTTTCGAAATGGAAGACCAGCGCAACTGGTCCGACGCCTCCTACAAGACCTATGTGCGGCCGTTGGCGCTGCCGTGGC CCTATGTGCTGCCGGCCGGCGAGACCAACCGCCAGACGATCAGCCTGCGCATTGCCAGTGACGACAACACACCGGCCTCC ACCGAGGCATCCGGCGCGATCCGTGTGACGCTCGGCGAGCCCGGTCCGGCGCTGCCGGATGTCGGCGTGATCATCTATCC CGACGATGTCGAGACGGCGCTGGCGAACCTCCCAACACTGTCGGCGCTCGGCCCGCAGCAACTGCTGCTTCATTACGATC CGACGGGCGGCCATGGGCTCGATGCCTTGCGCGCTTTCGCCCGGCTCGCCGCCGCTTATCCCGCCCGCACAACGCTCGAA TGCGTGGTCGCCTGCCGCGGCGATCTCGATGCTGAACTCGCAGAGGTCGCCGACATGGTGCGCCGGGCAAATCTGCGGCT CGACGCCATCGCGGTTTCGCCTTCGGTTGACCGGCAGTCGACACCGCCGGGGAGTGCCTGGCCGCCCTGCCCGCCGCTGG AAGATGTCTATGCCGCGGCACGCCGCGCCTTTCCCGACATCCGTCTCGGCGGCGGCATGTTCAGTTATTTCACCGAGCTC AACCGCAAGCGCGTTCCGGCCGGGCCGCTCGATTTCATCACGCATTGCACCTGCCCGATCGTACACGCCGCCGACGATCT CAGCGTCATGCAGTCGCTCGAGGCGTTGCCGTTCATCACGCGGTCGGCGCGGACGATCTTCGGCGACAAGCCCTACCGGA TCGGACCTTCGACCATTGCCATGCGGCAGAACCCTTATGGCGGTGCCACCAAGGACAATCCGCGGGGAGAGCGCATCGCC ATGGCGAACCGCGACCCGCGCCAGAATGGCCAGTTCGCCGCCGCCTGGACCATCGGCTATGCCGCGCGTGTCGCGCCGGC CGGCCTGGAGATGCTGACGCTGTCCGGCTTCACCGGGCAATTCGGCGTGCTGGCTGCATCCGGGGAACCCGTTGCGGAAG GCTCATTCCGGCCGGTCTTCCAGACTATCAAGGGGCTTTGCGAACTGGCTGGCCTTAAACATGTCACGGCCAAAACGAGC GATGAGACCCGGGTATTGGCGTTGGCCGGTCGCTCATCCTCGGGCGAGACGGTCGTGTGGCTGACGAACCTGACGGCAAG CGACGTGGCGGTCGACCTTTCGGAGTTTGGCCGAGGCCATCTTGTTATGGCACCCTACGCGATCGCGCGGATCGGCTGA
Upstream 100 bases:
>100_bases CGACGTCCGGCGCCGACAACCTCAAGACATTCGCGCTGGTCGAGGCTGCCTATATCGGCGCCGCAAGCCGGCAACCGGTG CAGATCGACGACCTGCTGAA
Downstream 100 bases:
>100_bases ATCAGATTACTTTTCAGAATTCATCACATAGAGGGCGCGCGAGCGCTCCAGATGCTTGATCATCGCCTTCTCGGCGCCAT CGGCATCTTTCTTCTCGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 612; Mature: 611
Protein sequence:
>612_residues MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVS YAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDP WQPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLE CVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTEL NRKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTS DETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG
Sequences:
>Translated_612_residues MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVS YAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDP WQPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLE CVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTEL NRKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTS DETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG >Mature_611_residues TTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGTYEPALTNLTIDQGADAFSVSY AASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFETNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPW QPFRDLRAITHEVRPGVTAECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAST EASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGLDALRAFARLAAAYPARTTLEC VVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQSTPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELN RKRVPAGPLDFITHCTCPIVHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIAM ANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVFQTIKGLCELAGLKHVTAKTSD ETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGHLVMAPYAIARIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65500; Mature: 65369
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGT CCCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCC YEPALTNLTIDQGADAFSVSYAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFE CCCCEEEEECCCCCCEEEEEEEHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCC TNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPWQPFRDLRAITHEVRPGVTA CCCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEE ECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS EEEECCCEEEECCCCCCCCCCHHHHCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCC TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGL CCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH DALRAFARLAAAYPARTTLECVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQS HHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC TPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELNRKRVPAGPLDFITHCTCPI CCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCE VHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA EECCCHHHHHHHHHHCHHHHHCCHHHCCCCCCEECCCEEEEECCCCCCCCCCCCCCCEEE MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVF ECCCCCCCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHH QTIKGLCELAGLKHVTAKTSDETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGH HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHEEEHHHCCCCC LVMAPYAIARIG EEECCHHHEECC >Mature Secondary Structure TTDRFLLCGTHAAETEPVRLIAGPLSAEFVNGNLRTIRHGGTEVLRAIAYIVRDRDWGT CCCCEEEEECCCCCCCCEEEEECCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCC YEPALTNLTIDQGADAFSVSYAASCAGPGGSRLAFHATIKGSSDGQLVFDVNALPESDFE CCCCEEEEECCCCCCEEEEEEEHCCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCC TNRCGFCILHPIAGLAGSQVTVEHTDGSVVATTLPDLIDPWQPFRDLRAITHEVRPGVTA CCCCCEEEEEHHCCCCCCEEEEEECCCCEEEECCHHHHCCHHHHHHHHHHHHHHCCCCEE ECRMEGDVFEMEDQRNWSDASYKTYVRPLALPWPYVLPAGETNRQTISLRIASDDNTPAS EEEECCCEEEECCCCCCCCCCHHHHCCEECCCCCEEECCCCCCCEEEEEEEECCCCCCCC TEASGAIRVTLGEPGPALPDVGVIIYPDDVETALANLPTLSALGPQQLLLHYDPTGGHGL CCCCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH DALRAFARLAAAYPARTTLECVVACRGDLDAELAEVADMVRRANLRLDAIAVSPSVDRQS HHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCC TPPGSAWPPCPPLEDVYAAARRAFPDIRLGGGMFSYFTELNRKRVPAGPLDFITHCTCPI CCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHHHHHHHCCCCCCCCCHHHHHHCCCCE VHAADDLSVMQSLEALPFITRSARTIFGDKPYRIGPSTIAMRQNPYGGATKDNPRGERIA EECCCHHHHHHHHHHCHHHHHCCHHHCCCCCCEECCCEEEEECCCCCCCCCCCCCCCEEE MANRDPRQNGQFAAAWTIGYAARVAPAGLEMLTLSGFTGQFGVLAASGEPVAEGSFRPVF ECCCCCCCCCCEEEEEEECHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCCHHHH QTIKGLCELAGLKHVTAKTSDETRVLALAGRSSSGETVVWLTNLTASDVAVDLSEFGRGH HHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHEEEHHHCCCCC LVMAPYAIARIG EEECCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA