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The map label for this gene is 13475836

Identifier: 13475836

GI number: 13475836

Start: 5770784

End: 5772034

Strand: Reverse

Name: 13475836

Synonym: mll7006

Alternate gene names: NA

Gene position: 5772034-5770784 (Counterclockwise)

Preceding gene: 13475838

Following gene: 13475835

Centisome position: 82.03

GC content: 64.27

Gene sequence:

>1251_bases
ATGATCACCCTCACCTATCGCATCGAAACGTCTGAAAGCATCGAGGCCCTGGCGGCCAAGATCGCCAGCGACCAGTCGAC
TGGCACCTTCGTCGCGCTGCCTGGCGAAACCGAGGAACTGAAGGCCCGGGTGGCGGCGCGCGTCCTGGCGATCCGGCATC
TACCCGACGCCGTGCAGCCCTCCATTCCGGAAGCCAGTAATGGCCCGTTCAAGCGCGCCGATGTCGACATCGCCTTTCCC
TTCGACGCTATCGGCACAGACCTGTCAGCGCTGATGACCATCGCCATCGGCGGCACCTATTCGATCAAGGGCCTGTCGGG
CATCCGCATCGTCGACATGAAGCTTCCTGATGACTATCGCGGCGCCCATCCCGGCCCGCAGTTCGGCGTTGCCGGCAGCC
GCAAACTGACCGGCGTCGAGGGCCGCCCGATCATCGGCACCATCGTCAAGCCGGCACTGGGGCTGCGGCCGTACGAGACA
GCCGAGATGGTCGGCGAATTGATCGCCGCCGGAGTCGATTTCATCAAGGACGACGAGAAGTTGATGAGCCCGGCCTATTC
GCCGCTGGCCGAGCGGGTGAAGGCGATCATGCCGCTGGTCCGCGACCACGAGCAGAAGACCGGCAAGAAGGTGATGTATG
CCTTCGGCATCTCGCATGCCGACCCGGACGAGATGATGCGCAACCATGATCTGGTGCTCAAGGCCGGCGGCAATTGCGCG
GTCATCAACATCAACTCCATCGGCTTCGGCGGCATGGCTTACCTTCGGAAGCGATCGGGCCTGGTGCTGCACGCCCATCG
CAACGGCTGGGACATCCTCACCCGCCACCCCGGCCTCGGCATGGATTTCAAGGTCTGGCAACAGTTCTGGCGATTGCTCG
GCGTCGACCAGTTCCAGATCAACGGCATCGCCTCAAAATATTGGGAGCCGGATGCATCCTTCATCGAATCCTTCAAGGCA
GTGACGACGCCGATCTTTTCGCCTGACGATTGCGCGCTGCCGGTCGCAGGTTCCGGCCAGTGGGGCGGGCAGGCGCCCGA
GACCTACCAACGAACCGGCCGCACGGTGGATCTGCTTTATCTCTGCGGCGGTGGCATCGTCAGCCATCCGGACGGGCCAG
GCGCCGGCGTGCGCGCCGTGCGGCAAGCCTGGCAAGCGGCGGTCGATGGCATCCCGCTGGCGAAATATGCCCGCAGCCAT
GCCGAGCTCGCGCGCTCGATCGAAAAGTTCGGCGACGGCAAGGCGGCGTGA

Upstream 100 bases:

>100_bases
CTTCCAGCGGGATATGTCTTGCAATACTTATGTACTCATTATACCAGATTTCGGACGCCGGTGAAACTTTTTCGAACGCC
TGGGCTTGAGATAGCAGACC

Downstream 100 bases:

>100_bases
GCGAAGTGATGCAGAACCTGATGCTTAGCTACTATGGCGACGACCTCACTGGCTCGACCGACGTCATGGAAGCGCTCGAG
CTTGGCGGCGTGCCGACCGT

Product: ribulose bisphosphate carboxylase, large subunit

Products: 3-phospho-D-glycerate; H+

Alternate protein names: RuBisCO-like protein [H]

Number of amino acids: Translated: 416; Mature: 416

Protein sequence:

>416_residues
MITLTYRIETSESIEALAAKIASDQSTGTFVALPGETEELKARVAARVLAIRHLPDAVQPSIPEASNGPFKRADVDIAFP
FDAIGTDLSALMTIAIGGTYSIKGLSGIRIVDMKLPDDYRGAHPGPQFGVAGSRKLTGVEGRPIIGTIVKPALGLRPYET
AEMVGELIAAGVDFIKDDEKLMSPAYSPLAERVKAIMPLVRDHEQKTGKKVMYAFGISHADPDEMMRNHDLVLKAGGNCA
VININSIGFGGMAYLRKRSGLVLHAHRNGWDILTRHPGLGMDFKVWQQFWRLLGVDQFQINGIASKYWEPDASFIESFKA
VTTPIFSPDDCALPVAGSGQWGGQAPETYQRTGRTVDLLYLCGGGIVSHPDGPGAGVRAVRQAWQAAVDGIPLAKYARSH
AELARSIEKFGDGKAA

Sequences:

>Translated_416_residues
MITLTYRIETSESIEALAAKIASDQSTGTFVALPGETEELKARVAARVLAIRHLPDAVQPSIPEASNGPFKRADVDIAFP
FDAIGTDLSALMTIAIGGTYSIKGLSGIRIVDMKLPDDYRGAHPGPQFGVAGSRKLTGVEGRPIIGTIVKPALGLRPYET
AEMVGELIAAGVDFIKDDEKLMSPAYSPLAERVKAIMPLVRDHEQKTGKKVMYAFGISHADPDEMMRNHDLVLKAGGNCA
VININSIGFGGMAYLRKRSGLVLHAHRNGWDILTRHPGLGMDFKVWQQFWRLLGVDQFQINGIASKYWEPDASFIESFKA
VTTPIFSPDDCALPVAGSGQWGGQAPETYQRTGRTVDLLYLCGGGIVSHPDGPGAGVRAVRQAWQAAVDGIPLAKYARSH
AELARSIEKFGDGKAA
>Mature_416_residues
MITLTYRIETSESIEALAAKIASDQSTGTFVALPGETEELKARVAARVLAIRHLPDAVQPSIPEASNGPFKRADVDIAFP
FDAIGTDLSALMTIAIGGTYSIKGLSGIRIVDMKLPDDYRGAHPGPQFGVAGSRKLTGVEGRPIIGTIVKPALGLRPYET
AEMVGELIAAGVDFIKDDEKLMSPAYSPLAERVKAIMPLVRDHEQKTGKKVMYAFGISHADPDEMMRNHDLVLKAGGNCA
VININSIGFGGMAYLRKRSGLVLHAHRNGWDILTRHPGLGMDFKVWQQFWRLLGVDQFQINGIASKYWEPDASFIESFKA
VTTPIFSPDDCALPVAGSGQWGGQAPETYQRTGRTVDLLYLCGGGIVSHPDGPGAGVRAVRQAWQAAVDGIPLAKYARSH
AELARSIEKFGDGKAA

Specific function: May be involved in sulfur metabolism and oxidative stress response. Does not show RuBisCO activity [H]

COG id: COG1850

COG function: function code G; Ribulose 1,5-bisphosphate carboxylase, large subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RuBisCO large chain family. Type IV subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020878
- InterPro:   IPR000685
- InterPro:   IPR017443 [H]

Pfam domain/function: PF00016 RuBisCO_large [H]

EC number: 4.1.1.39

Molecular weight: Translated: 44779; Mature: 44779

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: PS00157 RUBISCO_LARGE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITLTYRIETSESIEALAAKIASDQSTGTFVALPGETEELKARVAARVLAIRHLPDAVQP
CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCC
SIPEASNGPFKRADVDIAFPFDAIGTDLSALMTIAIGGTYSIKGLSGIRIVDMKLPDDYR
CCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCC
GAHPGPQFGVAGSRKLTGVEGRPIIGTIVKPALGLRPYETAEMVGELIAAGVDFIKDDEK
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH
LMSPAYSPLAERVKAIMPLVRDHEQKTGKKVMYAFGISHADPDEMMRNHDLVLKAGGNCA
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEEEECCCEE
VININSIGFGGMAYLRKRSGLVLHAHRNGWDILTRHPGLGMDFKVWQQFWRLLGVDQFQI
EEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
NGIASKYWEPDASFIESFKAVTTPIFSPDDCALPVAGSGQWGGQAPETYQRTGRTVDLLY
CCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCEEEEEE
LCGGGIVSHPDGPGAGVRAVRQAWQAAVDGIPLAKYARSHAELARSIEKFGDGKAA
EECCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MITLTYRIETSESIEALAAKIASDQSTGTFVALPGETEELKARVAARVLAIRHLPDAVQP
CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCHHHCC
SIPEASNGPFKRADVDIAFPFDAIGTDLSALMTIAIGGTYSIKGLSGIRIVDMKLPDDYR
CCCCCCCCCCCCCCEEEECCHHHHCCCHHHHHHHHCCCCEEECCCCCEEEEEEECCCCCC
GAHPGPQFGVAGSRKLTGVEGRPIIGTIVKPALGLRPYETAEMVGELIAAGVDFIKDDEK
CCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHH
LMSPAYSPLAERVKAIMPLVRDHEQKTGKKVMYAFGISHADPDEMMRNHDLVLKAGGNCA
HHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHCCCCEEEEECCCEE
VININSIGFGGMAYLRKRSGLVLHAHRNGWDILTRHPGLGMDFKVWQQFWRLLGVDQFQI
EEEECCCCCCHHHHHHHCCCEEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEEE
NGIASKYWEPDASFIESFKAVTTPIFSPDDCALPVAGSGQWGGQAPETYQRTGRTVDLLY
CCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCEEEEEE
LCGGGIVSHPDGPGAGVRAVRQAWQAAVDGIPLAKYARSHAELARSIEKFGDGKAA
EECCCEEECCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: D-ribulose 1,5-bisphosphate; CO2; H2O

Specific reaction: D-ribulose 1,5-bisphosphate + CO2 + H2O = 2 3-phospho-D-glycerate + 2 H+

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]