Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is yigI [C]

Identifier: 13475780

GI number: 13475780

Start: 5710269

End: 5710784

Strand: Direct

Name: yigI [C]

Synonym: mlr6946

Alternate gene names: 13475780

Gene position: 5710269-5710784 (Clockwise)

Preceding gene: 13475779

Following gene: 13475781

Centisome position: 81.16

GC content: 63.95

Gene sequence:

>516_bases
TTGCCTGCCGCCCATCCCTCTGCAATAAGCTTTGCCAGACAAACGAAGGCAATTGCGATGGCAGCAAAGATCGTACCGGC
TCCCGATTATGAGGATCGCGTCAGGGCGTCCTTCGCGCGCCAGCAGGCGATGGCGACGATCGGCGCCGAGCTGACACTGG
TGACGCCCGGCATCATCGAGATCGAGATGCCCTATTCGGCGGCGCTCACCCAGCAGCATGGCTTCCTGCATGCCGGCGTC
ATCTCGACGGCGCTGGACTCGGCCTGCGGCTACGCGGCCTTTTCGCTGATGCCGGAAAATTCCGGCGTGCTGACCATCGA
ATTCAAGGTCAACCTTCTGGCGCCGGGCAGGGGCGAACGGTTCCTATTCCGAGGCTCGGTGACCAAGCCCGGCCGCACCA
TCATCGTCGCCGATGGCCAGGCCTACGCCTTCGCCGCCGACGGCGAGGCCAAGCTCATCGCCACCATGACGGGAACGATG
ATGACGGTGGTTGGGCGGGATGGGATAGCGGGGTGA

Upstream 100 bases:

>100_bases
TTTATTTCTGCGCGCTGCGCCGGGCCAACTGAGCCGGCCGGATCGCCAATGTCTCCACATGGCGGCCGACGGGCGAATTG
TTGCAGTGCAGCAATTGCGA

Downstream 100 bases:

>100_bases
TGGCCAACATTACAAGAATTGGCGGCAAGGACGTCCTCTTCGTCATGGCGGCGCAGGCCGAATATGGCCCGCATCTGCAA
AAACTGTTCACGCCGCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Thioesterase Family Protein; Thioesterase/Thiol Ester Dehydrase-Isomerase; Phenylacetic Acid Degradation Protein Paai; Phenylacetic Acid Degradation Protein; Phenylacetic Acid Degradation Protein PAAI; Thioesterase Superfamily; LOW QUALITY PROTEIN Thioesterase Superfamily Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MPAAHPSAISFARQTKAIAMAAKIVPAPDYEDRVRASFARQQAMATIGAELTLVTPGIIEIEMPYSAALTQQHGFLHAGV
ISTALDSACGYAAFSLMPENSGVLTIEFKVNLLAPGRGERFLFRGSVTKPGRTIIVADGQAYAFAADGEAKLIATMTGTM
MTVVGRDGIAG

Sequences:

>Translated_171_residues
MPAAHPSAISFARQTKAIAMAAKIVPAPDYEDRVRASFARQQAMATIGAELTLVTPGIIEIEMPYSAALTQQHGFLHAGV
ISTALDSACGYAAFSLMPENSGVLTIEFKVNLLAPGRGERFLFRGSVTKPGRTIIVADGQAYAFAADGEAKLIATMTGTM
MTVVGRDGIAG
>Mature_170_residues
PAAHPSAISFARQTKAIAMAAKIVPAPDYEDRVRASFARQQAMATIGAELTLVTPGIIEIEMPYSAALTQQHGFLHAGVI
STALDSACGYAAFSLMPENSGVLTIEFKVNLLAPGRGERFLFRGSVTKPGRTIIVADGQAYAFAADGEAKLIATMTGTMM
TVVGRDGIAG

Specific function: Unknown

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17904; Mature: 17773

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAAHPSAISFARQTKAIAMAAKIVPAPDYEDRVRASFARQQAMATIGAELTLVTPGIIE
CCCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
IEMPYSAALTQQHGFLHAGVISTALDSACGYAAFSLMPENSGVLTIEFKVNLLAPGRGER
EECCCHHHHHHCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEECCCCCCE
FLFRGSVTKPGRTIIVADGQAYAFAADGEAKLIATMTGTMMTVVGRDGIAG
EEEECCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCEEEEEECCCCCCC
>Mature Secondary Structure 
PAAHPSAISFARQTKAIAMAAKIVPAPDYEDRVRASFARQQAMATIGAELTLVTPGIIE
CCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCEEE
IEMPYSAALTQQHGFLHAGVISTALDSACGYAAFSLMPENSGVLTIEFKVNLLAPGRGER
EECCCHHHHHHCCCEEEHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEEEECCCCCCE
FLFRGSVTKPGRTIIVADGQAYAFAADGEAKLIATMTGTMMTVVGRDGIAG
EEEECCCCCCCCEEEEECCCEEEEEECCCEEEEEEECCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA