| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is folD2
Identifier: 13475761
GI number: 13475761
Start: 5691462
End: 5692382
Strand: Reverse
Name: folD2
Synonym: mll6921
Alternate gene names: 13475761
Gene position: 5692382-5691462 (Counterclockwise)
Preceding gene: 13475763
Following gene: 13475755
Centisome position: 80.9
GC content: 65.69
Gene sequence:
>921_bases ATGTCCCTGCCCGACGACAGCCGCTATCTCAAGGGCGGCCCGGTTGCCCAGCGCATCATCGCCGCCGTGCGCGAGGACGC GGCGATTGCCAAGGCCGAGGGTTTTCCGCCCAAGCTGATCTCGATCACCGTCGGCGATACCGATGCCGTGGATGTCTATG TGCGCAACCAGCGCGCCAAGGCGCAGCTTGCCGGCATCGATTTCGAGGAACGGCGTTTTCCCGCCACCATCACCTCGGGC GAATTGGAAGCGGCCATCCACGGGCTGAACGCCGATCCGCGTGTCACCGGCATCATCATCCAGCGGCCGGTGCCCGCGCA TATTTCGGTCAAGACGCTGCAGGCGGCAGTGCATCCGCTCAAGGATGTCGAAGGCATGCACCCGGCCTCGATCGGCAACA TCGTCTACAACCAGCTTGATCTGGCGCCCTGCACGGCGGCTGCCTCCGTCGAACTGCTCAAGGAGACCGGCCTCGACCTC AAGGGGCTGGAAGTGGTCGTCGTCGGCCATTCGGAAATCGTCGGCAAGCCGATCGCTTTCTTGCTGATGAGCGAAGGCGC GACGGTCACGGTCTGCCACCACTTGACGCGATCGGTCGCCGCGCATGCGCGCCGCGCCGATGCGCTGTTCGTCGCCGTGG GCAAGCCGCGGCTGATCAAGGCCGACATGGTCAAGCCAGGGGCTGCCGTCATCGATATCGGCATCAATTCCGAGATCGGG CCCGATGGGACGAGCCGTATCGTCGGCGACGTCGACACCGACAGTGTGAAAGACGTGGCCTCCTGGATCACGCCGGTGCC GGGCGGCGTCGGCCCGATCACGGTGGCGATCCTGCTGCGTAACACGATGGTGGCGCTCAGCCGGCAGCGCGCGCTTTACG AGGCAACCTACGGCACGGCGGACAGGCTCGCGGCGGAGTAA
Upstream 100 bases:
>100_bases TCGTTGCGTCGCGCAGAAGGCATGGCGCTTCGCTTTCATGCTGCCATTTTCGGCGGTCTTTTGTTATGTCGGCGCCAACG CGAGAAAAGAGTCCACCTCC
Downstream 100 bases:
>100_bases GCGCCGATCCCTACTCCGCAGCGATCAGGCTCTCGTCTCGGACACCCTCCGGCTTCGGTCCGCCATAAGCCCAGTCGAGC AGCTTGATGGTGTGCACCAC
Product: methylenetetrahydrofolate dehydrogenase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSLPDDSRYLKGGPVAQRIIAAVREDAAIAKAEGFPPKLISITVGDTDAVDVYVRNQRAKAQLAGIDFEERRFPATITSG ELEAAIHGLNADPRVTGIIIQRPVPAHISVKTLQAAVHPLKDVEGMHPASIGNIVYNQLDLAPCTAAASVELLKETGLDL KGLEVVVVGHSEIVGKPIAFLLMSEGATVTVCHHLTRSVAAHARRADALFVAVGKPRLIKADMVKPGAAVIDIGINSEIG PDGTSRIVGDVDTDSVKDVASWITPVPGGVGPITVAILLRNTMVALSRQRALYEATYGTADRLAAE
Sequences:
>Translated_306_residues MSLPDDSRYLKGGPVAQRIIAAVREDAAIAKAEGFPPKLISITVGDTDAVDVYVRNQRAKAQLAGIDFEERRFPATITSG ELEAAIHGLNADPRVTGIIIQRPVPAHISVKTLQAAVHPLKDVEGMHPASIGNIVYNQLDLAPCTAAASVELLKETGLDL KGLEVVVVGHSEIVGKPIAFLLMSEGATVTVCHHLTRSVAAHARRADALFVAVGKPRLIKADMVKPGAAVIDIGINSEIG PDGTSRIVGDVDTDSVKDVASWITPVPGGVGPITVAILLRNTMVALSRQRALYEATYGTADRLAAE >Mature_305_residues SLPDDSRYLKGGPVAQRIIAAVREDAAIAKAEGFPPKLISITVGDTDAVDVYVRNQRAKAQLAGIDFEERRFPATITSGE LEAAIHGLNADPRVTGIIIQRPVPAHISVKTLQAAVHPLKDVEGMHPASIGNIVYNQLDLAPCTAAASVELLKETGLDLK GLEVVVVGHSEIVGKPIAFLLMSEGATVTVCHHLTRSVAAHARRADALFVAVGKPRLIKADMVKPGAAVIDIGINSEIGP DGTSRIVGDVDTDSVKDVASWITPVPGGVGPITVAILLRNTMVALSRQRALYEATYGTADRLAAE
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222418558, Length=263, Percent_Identity=45.2471482889734, Blast_Score=202, Evalue=4e-52, Organism=Homo sapiens, GI222136639, Length=288, Percent_Identity=37.8472222222222, Blast_Score=185, Evalue=4e-47, Organism=Homo sapiens, GI94721354, Length=302, Percent_Identity=40.0662251655629, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI36796743, Length=206, Percent_Identity=25.7281553398058, Blast_Score=66, Evalue=4e-11, Organism=Escherichia coli, GI1786741, Length=282, Percent_Identity=40.4255319148936, Blast_Score=188, Evalue=5e-49, Organism=Caenorhabditis elegans, GI17568735, Length=264, Percent_Identity=41.6666666666667, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6319558, Length=291, Percent_Identity=40.5498281786942, Blast_Score=193, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6321643, Length=270, Percent_Identity=38.1481481481481, Blast_Score=171, Evalue=1e-43, Organism=Saccharomyces cerevisiae, GI6322933, Length=308, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=5e-14, Organism=Drosophila melanogaster, GI17136818, Length=295, Percent_Identity=41.6949152542373, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI17136816, Length=295, Percent_Identity=41.6949152542373, Blast_Score=206, Evalue=2e-53, Organism=Drosophila melanogaster, GI24645718, Length=291, Percent_Identity=39.5189003436426, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI17137370, Length=291, Percent_Identity=39.5189003436426, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI62472483, Length=291, Percent_Identity=39.5189003436426, Blast_Score=186, Evalue=1e-47, Organism=Drosophila melanogaster, GI45551871, Length=291, Percent_Identity=39.5189003436426, Blast_Score=186, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD2_RHILO (Q987T6)
Other databases:
- EMBL: BA000012 - RefSeq: NP_107328.1 - HSSP: P11586 - ProteinModelPortal: Q987T6 - SMR: Q987T6 - GeneID: 1229983 - GenomeReviews: BA000012_GR - KEGG: mlo:mll6921 - NMPDR: fig|266835.1.peg.5429 - HOGENOM: HBG328751 - OMA: DEEIFPP - ProtClustDB: CLSK506682 - BRENDA: 1.5.1.5 - BRENDA: 3.5.4.9 - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 32229; Mature: 32097
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLPDDSRYLKGGPVAQRIIAAVREDAAIAKAEGFPPKLISITVGDTDAVDVYVRNQRAK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCE AQLAGIDFEERRFPATITSGELEAAIHGLNADPRVTGIIIQRPVPAHISVKTLQAAVHPL EEEECCCHHHCCCCEEEECCCCEEHEECCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHH KDVEGMHPASIGNIVYNQLDLAPCTAAASVELLKETGLDLKGLEVVVVGHSEIVGKPIAF HHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCEEE LLMSEGATVTVCHHLTRSVAAHARRADALFVAVGKPRLIKADMVKPGAAVIDIGINSEIG EEECCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCCCC PDGTSRIVGDVDTDSVKDVASWITPVPGGVGPITVAILLRNTMVALSRQRALYEATYGTA CCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DRLAAE HHHCCC >Mature Secondary Structure SLPDDSRYLKGGPVAQRIIAAVREDAAIAKAEGFPPKLISITVGDTDAVDVYVRNQRAK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECCCCE AQLAGIDFEERRFPATITSGELEAAIHGLNADPRVTGIIIQRPVPAHISVKTLQAAVHPL EEEECCCHHHCCCCEEEECCCCEEHEECCCCCCCEEEEEEECCCCCCEEHHHHHHHHHHH KDVEGMHPASIGNIVYNQLDLAPCTAAASVELLKETGLDLKGLEVVVVGHSEIVGKPIAF HHCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCEEE LLMSEGATVTVCHHLTRSVAAHARRADALFVAVGKPRLIKADMVKPGAAVIDIGINSEIG EEECCCCEEEHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCCCEEEEECCCCCCC PDGTSRIVGDVDTDSVKDVASWITPVPGGVGPITVAILLRNTMVALSRQRALYEATYGTA CCCCCCEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH DRLAAE HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968