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The map label for this gene is erfK [H]

Identifier: 13475763

GI number: 13475763

Start: 5692649

End: 5693380

Strand: Reverse

Name: erfK [H]

Synonym: mll6923

Alternate gene names: 13475763

Gene position: 5693380-5692649 (Counterclockwise)

Preceding gene: 13475765

Following gene: 13475761

Centisome position: 80.92

GC content: 65.98

Gene sequence:

>732_bases
ATGAAGAGAGTTGTGTTTTCCGTGCTCGGCGCCGCGGCTGTGTTTGCCGGCGTCACACCCTCGGCCGCTGGCGACCGCTA
TGCCGACAGGCCGCCAGTGATGGTGAGCCCCGACCTTTCCGCCCCCTGGGTGCTGCAGCTCGGCAATGCGCCCGGCATCG
TGCGGCAGAACCGCCAAATCGTGCAGCAGCCGCGCCTGCGGACCGCGCAGCCCGACCGGGTGCAGACGGCCGCCGTGCAG
GCGCCGGCGAAACGCATGGTCATGCGCCCGCAGATCAATCCGATCTACCTGCCGCAGGAAGTCGCCTATGACGGCCCGCA
GAAGCCGGGCACCATCGTCATCGATACGACGCAGAATTTCCTCTATCTGGTCGAGAAGAACGGCAAGGCGCGGCGCTACG
GCGTCGGCACCGGCAAGCCAGGCTTCGAATGGTCGGGCACGCACAAGATCACCAACAAGCGCGAGTGGCCGGACTGGCGC
CCGCCAGCGCAGATGATCAAGCGCGAAGCCGCCAAGGGCCGCTATCTGCCGACCTATCTGGCCGGCGGTATCGAGAATCC
GCTCGGCGCCCGCGCGCTCTATCTCGGCACCACCGAATACCGCATCCACGGCACCAACCAGCCATGGACGATCGGCGGCG
CGGTGTCGTCGGGTTGCATCCGGATGCGCAACGAGGACGTTGTCGACCTCTATGAGCGGGTCAATGTCGGAACCACGGTC
GAGGTGATATAA

Upstream 100 bases:

>100_bases
GCATTCCGATTCATGTTTCGGTTGCTGCTTGGGCGCCAATGATCGCTGAACCGGGGAGCGTTTCCACCCGGTATATCAGA
CGATCTAAGGTGCGTTCCCG

Downstream 100 bases:

>100_bases
TAGCTTCAGCGAATCACTTGATCAGGAAACACATCATTTCCTGAGGTCGGAAGGAATAACGGGGGACGGGCCGTATGGGG
ATGCGGTCGGTCAGGAAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKRVVFSVLGAAAVFAGVTPSAAGDRYADRPPVMVSPDLSAPWVLQLGNAPGIVRQNRQIVQQPRLRTAQPDRVQTAAVQ
APAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKARRYGVGTGKPGFEWSGTHKITNKREWPDWR
PPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGTTV
EVI

Sequences:

>Translated_243_residues
MKRVVFSVLGAAAVFAGVTPSAAGDRYADRPPVMVSPDLSAPWVLQLGNAPGIVRQNRQIVQQPRLRTAQPDRVQTAAVQ
APAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKARRYGVGTGKPGFEWSGTHKITNKREWPDWR
PPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGTTV
EVI
>Mature_243_residues
MKRVVFSVLGAAAVFAGVTPSAAGDRYADRPPVMVSPDLSAPWVLQLGNAPGIVRQNRQIVQQPRLRTAQPDRVQTAAVQ
APAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNFLYLVEKNGKARRYGVGTGKPGFEWSGTHKITNKREWPDWR
PPAQMIKREAAKGRYLPTYLAGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGTTV
EVI

Specific function: Responsible, at least in part, for anchoring of the major outer membrane lipoprotein (Lpp, also known as the Braun lipoprotein) to the peptidoglycan via a meso-diaminopimelyl-L-Lys- bond on the terminal residue of Lpp [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1788299, Length=153, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1787040, Length=137, Percent_Identity=40.1459854014599, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787356, Length=150, Percent_Identity=34, Blast_Score=80, Evalue=8e-17,
Organism=Escherichia coli, GI1787968, Length=152, Percent_Identity=34.8684210526316, Blast_Score=77, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 26806; Mature: 26806

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVVFSVLGAAAVFAGVTPSAAGDRYADRPPVMVSPDLSAPWVLQLGNAPGIVRQNRQI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHCCHHH
VQQPRLRTAQPDRVQTAAVQAPAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNF
HHCCCCCCCCCCHHHHHHHHCCHHHHEECCCCCEEECCHHHCCCCCCCCCEEEEECCCCE
LYLVEKNGKARRYGVGTGKPGFEWSGTHKITNKREWPDWRPPAQMIKREAAKGRYLPTYL
EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
AGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGTTV
HCCCCCCCCCEEEEECCEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHCCCCCEE
EVI
EEC
>Mature Secondary Structure
MKRVVFSVLGAAAVFAGVTPSAAGDRYADRPPVMVSPDLSAPWVLQLGNAPGIVRQNRQI
CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCEEEEECCCCCCHHCCHHH
VQQPRLRTAQPDRVQTAAVQAPAKRMVMRPQINPIYLPQEVAYDGPQKPGTIVIDTTQNF
HHCCCCCCCCCCHHHHHHHHCCHHHHEECCCCCEEECCHHHCCCCCCCCCEEEEECCCCE
LYLVEKNGKARRYGVGTGKPGFEWSGTHKITNKREWPDWRPPAQMIKREAAKGRYLPTYL
EEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHH
AGGIENPLGARALYLGTTEYRIHGTNQPWTIGGAVSSGCIRMRNEDVVDLYERVNVGTTV
HCCCCCCCCCEEEEECCEEEEEECCCCCEEECCCCCCCEEEECCCCHHHHHHHCCCCCEE
EVI
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592411; 9097040; 9278503; 9298646 [H]