| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475743
Identifier: 13475743
GI number: 13475743
Start: 5672703
End: 5673839
Strand: Reverse
Name: 13475743
Synonym: mll6895
Alternate gene names: NA
Gene position: 5673839-5672703 (Counterclockwise)
Preceding gene: 13475744
Following gene: 13475740
Centisome position: 80.64
GC content: 63.41
Gene sequence:
>1137_bases ATGACCGACAATCCGCACCATCTGGCGACGCCCAGCGGCAAACCGCGCGCGCGAAGCTTCGGCATCGGCTTCGACGGAAC GCCCGGGCCGTTCAACGCAATCACCGACCTACCCGGCGTCGCGGTCGGCTATGCGACGCTGATTTCAGGCGACGGGCCGC TCATCGTCGGCAAGGGGCCGGTACGCACCGGCGTCACGGCGATCCTGCCAAGACCGCTCGCCGACTTGGCCATACCGGTC TTCGCCGGTATTTTCAGCCAGAACGGCAATGGCGAGCTGACCGGCTCGCACATCATCGAGGAAACCGGCGCTTTCAACTT CCCGATCACCATCACCAATACGCACTCCTGCGGTGTTTCGCGTGACGGCACGCTGCGATGGATGCAACGCGTACTGCCCA CCGCGGTCGACAGCGCCTGGGGCCTGCCGGTGGCGGCGGAGACCTATGACGGGTTTCTCAACGACATCAATGGCCACCAT TTAACCTTCGATCACGTTGCCCAGGCACTCGATGACGCAACCGGCGGCCCGATCGAGGAAGGCAGCGTCGGCGGCGGCAC CGGCATGATCACTTTCGGCTTCAAGGCCGGCTCGGGCACGGCGTCGCGCATCGTTGGGTGGCAGGGAAATTCCTACACGG TCGGGGCCTTCGTGCAGTCGAATTTCGGCAAACGGCGCAATTTTACCCTTCGTGGCCTGCGCGCCGGATCCGAACTCACG GAGCCCGCGATCCGCGAAGGCACGCCACGCGCCGAAAAGGGTTCGATCATCGCCGTTGTCGCCACCGATGCGCCGTTCCT GCCGCACCAGATGAAGCGGCTGGCACGCCGGGTGCCGCTGGGCGTCGCGATGACCGGCGGCTTCGGCTATCACAGCTCAG GTGACATCTTTCTCGCCTTCTCGACAGCCAATCCTGCCGCCGCACTTGCGCCGTCGGGCCGTATCGCCAAGGCCGATTTT ATTCCCGATACAGACATCGATCCGTTTTTCGATGCCGTGATCCAGACGGTGGAGGAATCGATCCTCAACGCCCTGGCCGC CAATGACGACATGACCGGTCGCAACGGCAATTTCGTGCCGGCGCTGCCGAAGGCTTGGCTGAAAGAAAAGTTTGGGCTGA AAGAGAAATTGGGCTGA
Upstream 100 bases:
>100_bases CGGATGCGGTGGCGACCAGCGGTGCGGCGCGGCCAAAGCCGGCAGCCAAGCCATCAACAAAGGCCAAAGAACCCGGCAAT CAGGGATCGCTGTTCTGACC
Downstream 100 bases:
>100_bases GACGAAAACGCGGGCCAAAGGGCCCGCGCATTCAGACAAACAGAGAGTTCCCGGTAAGATCTATTCCGCGGCCTTGCTGG CCGCATGCTGGTGCTCGTCG
Product: D-aminopeptidase
Products: NA
Alternate protein names: D-Aminopeptidase; Aminopeptidase DmpA; Aminopeptidase; L-Aminopeptidase/D-Esterase; Peptidase S; T4 Family Peptidase; Peptidase T4 Family; Family; L-Aminopeptidase DmpA; S58 Family Peptidase; D-Amino Peptidase Dmpa Family; Serine Peptidase; L-Aminopeptidase Dmpa; Aminopeptidase DpmA; D-Alanine-D-Alanine Ligase / Aminopeptidase; Peptidase Family; Aminopeptidase-Like Protein; D-Aminopeptidease; D-AMINO PEPTIDASE DmpA Family; L-Aminopeptidase D-Ala-Esterase/Amidase
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MTDNPHHLATPSGKPRARSFGIGFDGTPGPFNAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPV FAGIFSQNGNGELTGSHIIEETGAFNFPITITNTHSCGVSRDGTLRWMQRVLPTAVDSAWGLPVAAETYDGFLNDINGHH LTFDHVAQALDDATGGPIEEGSVGGGTGMITFGFKAGSGTASRIVGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT EPAIREGTPRAEKGSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAFSTANPAAALAPSGRIAKADF IPDTDIDPFFDAVIQTVEESILNALAANDDMTGRNGNFVPALPKAWLKEKFGLKEKLG
Sequences:
>Translated_378_residues MTDNPHHLATPSGKPRARSFGIGFDGTPGPFNAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPV FAGIFSQNGNGELTGSHIIEETGAFNFPITITNTHSCGVSRDGTLRWMQRVLPTAVDSAWGLPVAAETYDGFLNDINGHH LTFDHVAQALDDATGGPIEEGSVGGGTGMITFGFKAGSGTASRIVGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT EPAIREGTPRAEKGSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAFSTANPAAALAPSGRIAKADF IPDTDIDPFFDAVIQTVEESILNALAANDDMTGRNGNFVPALPKAWLKEKFGLKEKLG >Mature_377_residues TDNPHHLATPSGKPRARSFGIGFDGTPGPFNAITDLPGVAVGYATLISGDGPLIVGKGPVRTGVTAILPRPLADLAIPVF AGIFSQNGNGELTGSHIIEETGAFNFPITITNTHSCGVSRDGTLRWMQRVLPTAVDSAWGLPVAAETYDGFLNDINGHHL TFDHVAQALDDATGGPIEEGSVGGGTGMITFGFKAGSGTASRIVGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELTE PAIREGTPRAEKGSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAFSTANPAAALAPSGRIAKADFI PDTDIDPFFDAVIQTVEESILNALAANDDMTGRNGNFVPALPKAWLKEKFGLKEKLG
Specific function: Unknown
COG id: COG3191
COG function: function code EQ; L-aminopeptidase/D-esterase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39581; Mature: 39450
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDNPHHLATPSGKPRARSFGIGFDGTPGPFNAITDLPGVAVGYATLISGDGPLIVGKGP CCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHEEEEECCCCCEEECCCC VRTGVTAILPRPLADLAIPVFAGIFSQNGNGELTGSHIIEETGAFNFPITITNTHSCGVS CHHCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCEEEECCCCCCCC RDGTLRWMQRVLPTAVDSAWGLPVAAETYDGFLNDINGHHLTFDHVAQALDDATGGPIEE CCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCC GSVGGGTGMITFGFKAGSGTASRIVGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT CCCCCCCEEEEEEEECCCCCHHEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHC EPAIREGTPRAEKGSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAF CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEE STANPAAALAPSGRIAKADFIPDTDIDPFFDAVIQTVEESILNALAANDDMTGRNGNFVP ECCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ALPKAWLKEKFGLKEKLG CCHHHHHHHHCCHHHHCC >Mature Secondary Structure TDNPHHLATPSGKPRARSFGIGFDGTPGPFNAITDLPGVAVGYATLISGDGPLIVGKGP CCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHCCCCHHHHEEEEECCCCCEEECCCC VRTGVTAILPRPLADLAIPVFAGIFSQNGNGELTGSHIIEETGAFNFPITITNTHSCGVS CHHCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEECCEEEECCCCCCCC RDGTLRWMQRVLPTAVDSAWGLPVAAETYDGFLNDINGHHLTFDHVAQALDDATGGPIEE CCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCCCC GSVGGGTGMITFGFKAGSGTASRIVGWQGNSYTVGAFVQSNFGKRRNFTLRGLRAGSELT CCCCCCCEEEEEEEECCCCCHHEEEECCCCCEEEEEEEECCCCCCCCCEEEEECCCCHHC EPAIREGTPRAEKGSIIAVVATDAPFLPHQMKRLARRVPLGVAMTGGFGYHSSGDIFLAF CCHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEEE STANPAAALAPSGRIAKADFIPDTDIDPFFDAVIQTVEESILNALAANDDMTGRNGNFVP ECCCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC ALPKAWLKEKFGLKEKLG CCHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA