| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475740
Identifier: 13475740
GI number: 13475740
Start: 5668351
End: 5669400
Strand: Reverse
Name: 13475740
Synonym: mll6891
Alternate gene names: NA
Gene position: 5669400-5668351 (Counterclockwise)
Preceding gene: 13475743
Following gene: 13475739
Centisome position: 80.58
GC content: 69.14
Gene sequence:
>1050_bases ATGGACGGGTATGACGAATCGATGTTCGACGACCTTGCCTTTGATGAAGCGGAAGGCCCCGCCGACAGCTACGACGAATT CGACGAAATGGACGAGGGCGACGGCTTCGATGAGGCCGACGAAGGCGACGAGTTCGACGAAGGCGACGAATTCGAGGCCT CGGGCTTCGACGAGATGGACGCTGGCGACGAATTCGATGCCGGTGACGAGTTCGACGAAGGCGACGGTTTCGATGAAGGC GATGAGTCCGACGACGATGCCTGGGATCAGGCCATGAGCTACGCGCTTGCGGCTGAAGACAGCGACGAGTTCTTCCGCCG CATCGCCCGCGGCGTGCGCGGCGTCGTGCGCACGGTCCGACGTGCCGCTCCCACAATCGGCCGCATCGCTCGCGCCGTTG CGCCGGTCGCCAGCCTTATTCCCGGCTACGGCACCGCGATTGGTGGCATCGCCAATGTCGTCGGCCAGTTGATGGCGGAC GAAGCCTCCGAGGACGAGGCGCTTGACGCCTTCGCCGAGCTCGCGGTGCGCAATCGTGCCGCCATTCCCGTTGTGGCCGC GCTTGCGACGAGGCGAGTGCTTGGCCCGGTGGCGGTGCGCATGCCCGCGGCCGCACGCACCCAGGCGGTTCGCACCGTGC GCCGTGCCGCCACCCAGCTCGTCAACCGTGGCGGTCCGACCGCGATCCGCGCTCTGCCGCGCATCGCCAACAGCGTCCGC CGCACCGCCGTCACGCGCCGCACCCCGGCATCGGTCCGGCCACTGGTTCTGGCACGAACCGCGCGTCGCGTCGCGGCACG CGGGCAGGGTCTGCGCCGGCAGTTGACGCGACCCCTGCAGAGAGGGCGCCAGATCGTGCGCCGCACCGCGGCGGCGGTTC GCGCCGGCATGGCCCCAGGACGCAACCTGGCGCGTATCGCCGGACGGGCCTTGGGGCGGGCTGCCGGCGGTTGGCCAGGC GGTTGGACTGGCGGATATGGCCCAAATCAAGGGCGCCGGCGGCGTATCGTGATCCGCGGTCCGGTCAGCATCACCATCCG GCCCAATTAA
Upstream 100 bases:
>100_bases GACTTGAGAGCTATTGTCTCGAGCGCGACTATCCAGACCGGCGTTAATCGCTTTGGTCCCGCTCCCCTGAGGGGCCGATC GCTCAAGAGGAGATCTCGAG
Downstream 100 bases:
>100_bases ACCCAGTCGGTGCAACAAGAAGGATCGTGGCGATGCGCACGGGTTCTTCGACCAGGCGGTTCCTGGACACCAAGCTGCGG GCTTTGAAAGCTCGCGCACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MDGYDESMFDDLAFDEAEGPADSYDEFDEMDEGDGFDEADEGDEFDEGDEFEASGFDEMDAGDEFDAGDEFDEGDGFDEG DESDDDAWDQAMSYALAAEDSDEFFRRIARGVRGVVRTVRRAAPTIGRIARAVAPVASLIPGYGTAIGGIANVVGQLMAD EASEDEALDAFAELAVRNRAAIPVVAALATRRVLGPVAVRMPAAARTQAVRTVRRAATQLVNRGGPTAIRALPRIANSVR RTAVTRRTPASVRPLVLARTARRVAARGQGLRRQLTRPLQRGRQIVRRTAAAVRAGMAPGRNLARIAGRALGRAAGGWPG GWTGGYGPNQGRRRRIVIRGPVSITIRPN
Sequences:
>Translated_349_residues MDGYDESMFDDLAFDEAEGPADSYDEFDEMDEGDGFDEADEGDEFDEGDEFEASGFDEMDAGDEFDAGDEFDEGDGFDEG DESDDDAWDQAMSYALAAEDSDEFFRRIARGVRGVVRTVRRAAPTIGRIARAVAPVASLIPGYGTAIGGIANVVGQLMAD EASEDEALDAFAELAVRNRAAIPVVAALATRRVLGPVAVRMPAAARTQAVRTVRRAATQLVNRGGPTAIRALPRIANSVR RTAVTRRTPASVRPLVLARTARRVAARGQGLRRQLTRPLQRGRQIVRRTAAAVRAGMAPGRNLARIAGRALGRAAGGWPG GWTGGYGPNQGRRRRIVIRGPVSITIRPN >Mature_349_residues MDGYDESMFDDLAFDEAEGPADSYDEFDEMDEGDGFDEADEGDEFDEGDEFEASGFDEMDAGDEFDAGDEFDEGDGFDEG DESDDDAWDQAMSYALAAEDSDEFFRRIARGVRGVVRTVRRAAPTIGRIARAVAPVASLIPGYGTAIGGIANVVGQLMAD EASEDEALDAFAELAVRNRAAIPVVAALATRRVLGPVAVRMPAAARTQAVRTVRRAATQLVNRGGPTAIRALPRIANSVR RTAVTRRTPASVRPLVLARTARRVAARGQGLRRQLTRPLQRGRQIVRRTAAAVRAGMAPGRNLARIAGRALGRAAGGWPG GWTGGYGPNQGRRRRIVIRGPVSITIRPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37474; Mature: 37474
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGYDESMFDDLAFDEAEGPADSYDEFDEMDEGDGFDEADEGDEFDEGDEFEASGFDEMD CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDEFDAGDEFDEGDGFDEGDESDDDAWDQAMSYALAAEDSDEFFRRIARGVRGVVRTVR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RAAPTIGRIARAVAPVASLIPGYGTAIGGIANVVGQLMADEASEDEALDAFAELAVRNRA HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC AIPVVAALATRRVLGPVAVRMPAAARTQAVRTVRRAATQLVNRGGPTAIRALPRIANSVR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RTAVTRRTPASVRPLVLARTARRVAARGQGLRRQLTRPLQRGRQIVRRTAAAVRAGMAPG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RNLARIAGRALGRAAGGWPGGWTGGYGPNQGRRRRIVIRGPVSITIRPN CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCC >Mature Secondary Structure MDGYDESMFDDLAFDEAEGPADSYDEFDEMDEGDGFDEADEGDEFDEGDEFEASGFDEMD CCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AGDEFDAGDEFDEGDGFDEGDESDDDAWDQAMSYALAAEDSDEFFRRIARGVRGVVRTVR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RAAPTIGRIARAVAPVASLIPGYGTAIGGIANVVGQLMADEASEDEALDAFAELAVRNRA HHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC AIPVVAALATRRVLGPVAVRMPAAARTQAVRTVRRAATQLVNRGGPTAIRALPRIANSVR HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH RTAVTRRTPASVRPLVLARTARRVAARGQGLRRQLTRPLQRGRQIVRRTAAAVRAGMAPG HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RNLARIAGRALGRAAGGWPGGWTGGYGPNQGRRRRIVIRGPVSITIRPN CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA