Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475738

Identifier: 13475738

GI number: 13475738

Start: 5665254

End: 5666948

Strand: Reverse

Name: 13475738

Synonym: mll6887

Alternate gene names: NA

Gene position: 5666948-5665254 (Counterclockwise)

Preceding gene: 13475739

Following gene: 13475737

Centisome position: 80.54

GC content: 64.78

Gene sequence:

>1695_bases
GTGGACAATCTGCTGCGCAAGACGCTGCGCGTGAGTGACCCGCGCGATCCCGACCAGATCGCCAACGCTCTCTTGAACTT
CTATCCGGAGGAGGCAGACAGGGATCGACGCGAACAAGCCGGCCTGCCTTATTCGAGCGTGCCCGACTATGTGCCGCAAG
CCCGCAACACGGGCCCCTCCTCCGTCGAGATGGCACAGGCGCAGGACGATCTCGAGCGCGACCTGCAGACGCTTTCGACC
TCCTCGCCGCTGAAGGACATCCGCATCGAGATGATCGGCTGGGGCCGCTCGATCCGGCAGCTCGCCAATGATGGACTGGC
TGCCGCCAGGCTCGCTCTCGATTCGGTCAATCACGACCGTGCGATGTCGGCGCGCCGCCAGCTCGGCGAGTATTCGCGCC
TGGCGCGCTATGTCGGCACGCTCACCGACGGCAGCGCCATCCTGTTCAGGCGGTTTGCCCAGAGCTGCGATGTGCTGGCC
GGGCTCATTCTTGTCGCCATCGGCGAGGGGCTGGCGTCCAACGGCATCACCCGCAGCACCTCGATCGTGCGTTCGGCGGC
CGGAGAACTGCAGGCACGCCGCAACGCCGTCATCATGGCGCTGCGCAGCCTGACCGGTTCGGTTGAAAGCACGCTTGGCC
AGGAGGACTGGCCGCGCGGCATCGAGGCCTACCGAAATCTGGTGCAGCAGCTGGAGGCCGGCGGCCAGGCGGATCTGCGC
GCGCTGCTGGAAGAGAACGCACTGTCGCAAGCGATGGACGACCTTGTCGACCTCTCGACCGGGGCAAGCGTCGAAGGCTT
GCGCGAGCTGTCGACCGCGTCGGCAATGCTGGTTCACCGCTTCCAGCGCCTGATCCAGTTCGGCCAGAGCATCCCGGTTC
CGATCGATGTGCCGATCACTTCGGGCCCGCCGGAATCGCCGCCGCTGGTGGCATTCGTCTCCAGCCTGCAGCTGTTCGTC
GACGCCTTCGTCTCGAAAGGCAGCTCGCGGCTGCTCTACGTCGCGCGCCCGCCGATCATCGTCTATGGCCTTTACGGCGC
CGGCGGACCGGACCAGGGCGCCATCCGGCTGATGAACCTGACCATCGCGCGCGGTTTCCTGCTCGAGCAGGTCGACTGCT
TCGCCGGCTGCGGCTGCGATGACGACGATATCTCCTGCCAGGTGCTGCTCGATTACCTGCTGTTCCTGCTCGACAGGGCG
ATCGACCTCTATGCGGTCGGCACGGATCCGGACGGCCTCGGCGAACAGGAAAGGCGGGCTACCGCCGTTGGCCTCGCCAT
CGGCGCGGCGCTGGACCTGACCGACCAGTTGAAGAATCCGGGCGTGCTTCTGTGTGAATTCAGCGACAAGCTGAAAAACA
AGCTCAGTGTCATCCGTGATGAGTTGCTCGACCCATTCGGCGCTCCTGCGGCCTGGGACCCGGGCCTGAAGTCGCTGATG
GTGCGTGAGCTGCGTATCGCCTACCAGGCTGAGGACCAGACGGAACGCCTGGTGCGTTCGCTGACGCCGCAATGCGACTT
CAACGTCTTCAATTTCCCCAACAATCAGTCGCTGATCCGCTGGATGATAAGTGCGATCCTCCAGGATATGTTCGGCCTTG
GCACCAATCTGCCGAGCCCGGTCCAGATGCCGTCGCCGATCGCCAGTTCCATGGCGAGCATGGGTCAGAACCGTCCCGAC
TACTGGTCAGCCTGA

Upstream 100 bases:

>100_bases
CCCCAGCCGCACTCGTTGCATGAGGTGAGATGTCATGGTCGACGTATTTACAGCCGCCGCCAGCCCGGTCTCGAAATTTC
GGTCTCCTGCCACGGTTGCC

Downstream 100 bases:

>100_bases
GCTGGCAGGAGAGGAGCACGACAATGGCTGCGAAGATTCCGTTTCCCTACCACCCGGCCAACAAGTTCCACGCCGGGGTC
AAGGCCCGCTTCGAGGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST
SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA
GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR
ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV
DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA
IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM
VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD
YWSA

Sequences:

>Translated_564_residues
MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST
SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA
GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR
ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV
DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA
IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM
VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD
YWSA
>Mature_564_residues
MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST
SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA
GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR
ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV
DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA
IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM
VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD
YWSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61478; Mature: 61478

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPS
CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
SVEMAQAQDDLERDLQTLSTSSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCHHH
AMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLAGLILVAIGEGLASNGITRST
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHH
SIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
SGPPESPPLVAFVSSLQLFVDAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEHHHH
TIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRAIDLYAVGTDPDGLGEQERRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHH
TAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM
HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSP
HHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VQMPSPIASSMASMGQNRPDYWSA
CCCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPS
CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC
SVEMAQAQDDLERDLQTLSTSSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDR
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCHHH
AMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLAGLILVAIGEGLASNGITRST
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHH
SIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPIT
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC
SGPPESPPLVAFVSSLQLFVDAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNL
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEHHHH
TIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRAIDLYAVGTDPDGLGEQERRA
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHH
TAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM
HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSP
HHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
VQMPSPIASSMASMGQNRPDYWSA
CCCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA