| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475739
Identifier: 13475739
GI number: 13475739
Start: 5667026
End: 5668324
Strand: Reverse
Name: 13475739
Synonym: mll6889
Alternate gene names: NA
Gene position: 5668324-5667026 (Counterclockwise)
Preceding gene: 13475740
Following gene: 13475738
Centisome position: 80.56
GC content: 67.59
Gene sequence:
>1299_bases GTGGCGATGCGCACGGGTTCTTCGACCAGGCGGTTCCTGGACACCAAGCTGCGGGCTTTGAAAGCTCGCGCACAACGCCT CAACCGCCTGACACCGAGGCGCATCGGACTTCGTCCCGAAGACCTGCCCTATGCGCCGTCGCGGGCTCACTTCCATGCCG CCAACAAGCGGCTGGCGACCATCGGCAATGCCATCAACCGGCATATCGCCGAGATCGAACGCGCCTGGCCGCCCGCGACG GCCCAGGCCGCGCTCACCCAGATGGCGATGCTCGACCGCAGGATCGATCGGCTGCGCCGGACCTTCGGCATGTTCTTCGA GGTGATGTCGCAGCGCGGCTCAGGCTTCGCGCCGGCGCTCGCCGCCCATGACGCGATCGCGCTCGACTGCTACACGGTCG TCCGCGCGGCCTTGCCGGGCGTCTTTGGTGGCCCGCTGCTCAAGCCGCTGACCTACATGGAACACGGCTATTCGCCGGCC ACGCAGCGCCGAGGCGTAGCCCTCGCCCGCTTGCTCGGCGACAGCAATCCGTTCCCGGTGATCCGCATTCCCTGGGATCG CGACAATCCCTGGCAGTCCGTGTTCCTGCACGAAGTCGCCCACAATTTGCAGGCCGACATGGGCCTGTGGCAGGAGAACG CGCAAGCGGTCGCCAACCGCCTGGCCTCGATGCGTTTCGACCCGTTGGTGGTGACGATCCTGCGCCGCTGGCACAAGGAA ATCTTCGCCGACCTCGCCGCACTGCTGCTCGGCGGCACCGCGTCGGTCTGGGGCATGATGGAATTCCTCGCCCATCCAGG CGCGCGTGCCCTCACCTATCGCCCCGGGGGGGCGCATCCAACCGGCTGGATCCGGGTTCTGATCTTGACCGAAATGCTGC GTCGCATGGGCTTTGCCGCCGAGGCGGCGCGCGCCGAACGCGTCTGGCGTGGCCTTTACAATCCGGCGCGCGGCCACAGG CTGCCGCCGGTCCTGCTTGCTTCGGCTCCTCGCGTCATTCCGGCGGTGGTCGATGAGATCGCCTATCAGCCGCGCCGGGG TCTTGGGCAGCACGCGCTGGCCGACGCCATCCCTTTCACGCGCGCCGACGAAGCCCGCATCCGTCGTGGCGGAATCCAGA TCGCGGCGGGGCAAGTACCCGACCTGCCGCCACGTTTTCTTGTGTCGGCCAGCCGGTTCGCGCTGGAAGCCGGCGCCGAA CCGGACGCCATTGCAAAGCTTGTCATCAGAAACCTGGCCCAGCGTCAGGCAAACCGACGGCCTACTGCGCAACCGTCCCC AGCCGCACTCGTTGCATGA
Upstream 100 bases:
>100_bases ATGGCCCAAATCAAGGGCGCCGGCGGCGTATCGTGATCCGCGGTCCGGTCAGCATCACCATCCGGCCCAATTAAACCCAG TCGGTGCAACAAGAAGGATC
Downstream 100 bases:
>100_bases GGTGAGATGTCATGGTCGACGTATTTACAGCCGCCGCCAGCCCGGTCTCGAAATTTCGGTCTCCTGCCACGGTTGCCGTG GACAATCTGCTGCGCAAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 432; Mature: 431
Protein sequence:
>432_residues MAMRTGSSTRRFLDTKLRALKARAQRLNRLTPRRIGLRPEDLPYAPSRAHFHAANKRLATIGNAINRHIAEIERAWPPAT AQAALTQMAMLDRRIDRLRRTFGMFFEVMSQRGSGFAPALAAHDAIALDCYTVVRAALPGVFGGPLLKPLTYMEHGYSPA TQRRGVALARLLGDSNPFPVIRIPWDRDNPWQSVFLHEVAHNLQADMGLWQENAQAVANRLASMRFDPLVVTILRRWHKE IFADLAALLLGGTASVWGMMEFLAHPGARALTYRPGGAHPTGWIRVLILTEMLRRMGFAAEAARAERVWRGLYNPARGHR LPPVLLASAPRVIPAVVDEIAYQPRRGLGQHALADAIPFTRADEARIRRGGIQIAAGQVPDLPPRFLVSASRFALEAGAE PDAIAKLVIRNLAQRQANRRPTAQPSPAALVA
Sequences:
>Translated_432_residues MAMRTGSSTRRFLDTKLRALKARAQRLNRLTPRRIGLRPEDLPYAPSRAHFHAANKRLATIGNAINRHIAEIERAWPPAT AQAALTQMAMLDRRIDRLRRTFGMFFEVMSQRGSGFAPALAAHDAIALDCYTVVRAALPGVFGGPLLKPLTYMEHGYSPA TQRRGVALARLLGDSNPFPVIRIPWDRDNPWQSVFLHEVAHNLQADMGLWQENAQAVANRLASMRFDPLVVTILRRWHKE IFADLAALLLGGTASVWGMMEFLAHPGARALTYRPGGAHPTGWIRVLILTEMLRRMGFAAEAARAERVWRGLYNPARGHR LPPVLLASAPRVIPAVVDEIAYQPRRGLGQHALADAIPFTRADEARIRRGGIQIAAGQVPDLPPRFLVSASRFALEAGAE PDAIAKLVIRNLAQRQANRRPTAQPSPAALVA >Mature_431_residues AMRTGSSTRRFLDTKLRALKARAQRLNRLTPRRIGLRPEDLPYAPSRAHFHAANKRLATIGNAINRHIAEIERAWPPATA QAALTQMAMLDRRIDRLRRTFGMFFEVMSQRGSGFAPALAAHDAIALDCYTVVRAALPGVFGGPLLKPLTYMEHGYSPAT QRRGVALARLLGDSNPFPVIRIPWDRDNPWQSVFLHEVAHNLQADMGLWQENAQAVANRLASMRFDPLVVTILRRWHKEI FADLAALLLGGTASVWGMMEFLAHPGARALTYRPGGAHPTGWIRVLILTEMLRRMGFAAEAARAERVWRGLYNPARGHRL PPVLLASAPRVIPAVVDEIAYQPRRGLGQHALADAIPFTRADEARIRRGGIQIAAGQVPDLPPRFLVSASRFALEAGAEP DAIAKLVIRNLAQRQANRRPTAQPSPAALVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47769; Mature: 47638
Theoretical pI: Translated: 11.94; Mature: 11.94
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRTGSSTRRFLDTKLRALKARAQRLNRLTPRRIGLRPEDLPYAPSRAHFHAANKRLAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHH IGNAINRHIAEIERAWPPATAQAALTQMAMLDRRIDRLRRTFGMFFEVMSQRGSGFAPAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AAHDAIALDCYTVVRAALPGVFGGPLLKPLTYMEHGYSPATQRRGVALARLLGDSNPFPV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCE IRIPWDRDNPWQSVFLHEVAHNLQADMGLWQENAQAVANRLASMRFDPLVVTILRRWHKE EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IFADLAALLLGGTASVWGMMEFLAHPGARALTYRPGGAHPTGWIRVLILTEMLRRMGFAA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHH EAARAERVWRGLYNPARGHRLPPVLLASAPRVIPAVVDEIAYQPRRGLGQHALADAIPFT HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC RADEARIRRGGIQIAAGQVPDLPPRFLVSASRFALEAGAEPDAIAKLVIRNLAQRQANRR CCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PTAQPSPAALVA CCCCCCCCCCCC >Mature Secondary Structure AMRTGSSTRRFLDTKLRALKARAQRLNRLTPRRIGLRPEDLPYAPSRAHFHAANKRLAT CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHH IGNAINRHIAEIERAWPPATAQAALTQMAMLDRRIDRLRRTFGMFFEVMSQRGSGFAPAL HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH AAHDAIALDCYTVVRAALPGVFGGPLLKPLTYMEHGYSPATQRRGVALARLLGDSNPFPV HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCE IRIPWDRDNPWQSVFLHEVAHNLQADMGLWQENAQAVANRLASMRFDPLVVTILRRWHKE EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IFADLAALLLGGTASVWGMMEFLAHPGARALTYRPGGAHPTGWIRVLILTEMLRRMGFAA HHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHH EAARAERVWRGLYNPARGHRLPPVLLASAPRVIPAVVDEIAYQPRRGLGQHALADAIPFT HHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHCCCC RADEARIRRGGIQIAAGQVPDLPPRFLVSASRFALEAGAEPDAIAKLVIRNLAQRQANRR CCHHHHHHHCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC PTAQPSPAALVA CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA