| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475737
Identifier: 13475737
GI number: 13475737
Start: 5664556
End: 5665230
Strand: Reverse
Name: 13475737
Synonym: mll6886
Alternate gene names: NA
Gene position: 5665230-5664556 (Counterclockwise)
Preceding gene: 13475738
Following gene: 13475736
Centisome position: 80.52
GC content: 62.96
Gene sequence:
>675_bases ATGGCTGCGAAGATTCCGTTTCCCTACCACCCGGCCAACAAGTTCCACGCCGGGGTCAAGGCCCGCTTCGAGGTCGAGGC CGAGACACCGCAATCGATCGATCGTCTGACCGACAAGGTCGTCACCAGCGGCGACAGGACCAAGACCGCCATCGGCGACG TTGCCAGCGCAATCAGGGAGTTCCCCGATGGAAAACGGTCGAAGCAGATTTTCGACCGGCTGATAGCCGCGATCGAAACC ATCGCGACTGGACTGCCCGATGGCGACGCCATCGACAAGAAGCTCGGCGAGATCACCACGGCGATCAACAGGCTGGATGA AACGGTGCAGTCGCTTGGTCTGCGCGACAAGGACAATGTCACGGCGCTCTATGCCGCCGCTGTCGACACGTCGGGCGACA TTGTCGGCCGGACAATCGCCGGGCGCTGGTTCAACCAGGCGAAATTCGCGTCGTTGCAGGACATCGTGGCGTTCCAGAAG GGCAAGCCGCAGGAAAATCGCCGCAACGAGTTCGTGAAGCGCCTGCGCGATGCCAACACGTTCAGCGGCGGCCTGCCGTC GGTCGTCACCGATAGCGAACTGGTGCGCTTCTTCGACCTCGCGCCAGCCGTGATGAACGCGATTGCCGCCAGCCAGGACG CAGTGTCCGGCGGCCAACAGCCGCCAAGTGCCTGA
Upstream 100 bases:
>100_bases CGGTCCAGATGCCGTCGCCGATCGCCAGTTCCATGGCGAGCATGGGTCAGAACCGTCCCGACTACTGGTCAGCCTGAGCT GGCAGGAGAGGAGCACGACA
Downstream 100 bases:
>100_bases GATCCCAAGTGCCTGAGATCCCAAGTGCTTGAGAAACCAAGTGCCTGAGAACTACGAGCAGCCAATTCGAGCAAGATGAG GTCTGATTATGGCTAGTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAAKIPFPYHPANKFHAGVKARFEVEAETPQSIDRLTDKVVTSGDRTKTAIGDVASAIREFPDGKRSKQIFDRLIAAIET IATGLPDGDAIDKKLGEITTAINRLDETVQSLGLRDKDNVTALYAAAVDTSGDIVGRTIAGRWFNQAKFASLQDIVAFQK GKPQENRRNEFVKRLRDANTFSGGLPSVVTDSELVRFFDLAPAVMNAIAASQDAVSGGQQPPSA
Sequences:
>Translated_224_residues MAAKIPFPYHPANKFHAGVKARFEVEAETPQSIDRLTDKVVTSGDRTKTAIGDVASAIREFPDGKRSKQIFDRLIAAIET IATGLPDGDAIDKKLGEITTAINRLDETVQSLGLRDKDNVTALYAAAVDTSGDIVGRTIAGRWFNQAKFASLQDIVAFQK GKPQENRRNEFVKRLRDANTFSGGLPSVVTDSELVRFFDLAPAVMNAIAASQDAVSGGQQPPSA >Mature_223_residues AAKIPFPYHPANKFHAGVKARFEVEAETPQSIDRLTDKVVTSGDRTKTAIGDVASAIREFPDGKRSKQIFDRLIAAIETI ATGLPDGDAIDKKLGEITTAINRLDETVQSLGLRDKDNVTALYAAAVDTSGDIVGRTIAGRWFNQAKFASLQDIVAFQKG KPQENRRNEFVKRLRDANTFSGGLPSVVTDSELVRFFDLAPAVMNAIAASQDAVSGGQQPPSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24159; Mature: 24028
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKIPFPYHPANKFHAGVKARFEVEAETPQSIDRLTDKVVTSGDRTKTAIGDVASAIRE CCCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FPDGKRSKQIFDRLIAAIETIATGLPDGDAIDKKLGEITTAINRLDETVQSLGLRDKDNV CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TALYAAAVDTSGDIVGRTIAGRWFNQAKFASLQDIVAFQKGKPQENRRNEFVKRLRDANT HEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC FSGGLPSVVTDSELVRFFDLAPAVMNAIAASQDAVSGGQQPPSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AAKIPFPYHPANKFHAGVKARFEVEAETPQSIDRLTDKVVTSGDRTKTAIGDVASAIRE CCCCCCCCCCCHHHHCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FPDGKRSKQIFDRLIAAIETIATGLPDGDAIDKKLGEITTAINRLDETVQSLGLRDKDNV CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH TALYAAAVDTSGDIVGRTIAGRWFNQAKFASLQDIVAFQKGKPQENRRNEFVKRLRDANT HEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC FSGGLPSVVTDSELVRFFDLAPAVMNAIAASQDAVSGGQQPPSA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA