| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475738
Identifier: 13475738
GI number: 13475738
Start: 5665254
End: 5666948
Strand: Reverse
Name: 13475738
Synonym: mll6887
Alternate gene names: NA
Gene position: 5666948-5665254 (Counterclockwise)
Preceding gene: 13475739
Following gene: 13475737
Centisome position: 80.54
GC content: 64.78
Gene sequence:
>1695_bases GTGGACAATCTGCTGCGCAAGACGCTGCGCGTGAGTGACCCGCGCGATCCCGACCAGATCGCCAACGCTCTCTTGAACTT CTATCCGGAGGAGGCAGACAGGGATCGACGCGAACAAGCCGGCCTGCCTTATTCGAGCGTGCCCGACTATGTGCCGCAAG CCCGCAACACGGGCCCCTCCTCCGTCGAGATGGCACAGGCGCAGGACGATCTCGAGCGCGACCTGCAGACGCTTTCGACC TCCTCGCCGCTGAAGGACATCCGCATCGAGATGATCGGCTGGGGCCGCTCGATCCGGCAGCTCGCCAATGATGGACTGGC TGCCGCCAGGCTCGCTCTCGATTCGGTCAATCACGACCGTGCGATGTCGGCGCGCCGCCAGCTCGGCGAGTATTCGCGCC TGGCGCGCTATGTCGGCACGCTCACCGACGGCAGCGCCATCCTGTTCAGGCGGTTTGCCCAGAGCTGCGATGTGCTGGCC GGGCTCATTCTTGTCGCCATCGGCGAGGGGCTGGCGTCCAACGGCATCACCCGCAGCACCTCGATCGTGCGTTCGGCGGC CGGAGAACTGCAGGCACGCCGCAACGCCGTCATCATGGCGCTGCGCAGCCTGACCGGTTCGGTTGAAAGCACGCTTGGCC AGGAGGACTGGCCGCGCGGCATCGAGGCCTACCGAAATCTGGTGCAGCAGCTGGAGGCCGGCGGCCAGGCGGATCTGCGC GCGCTGCTGGAAGAGAACGCACTGTCGCAAGCGATGGACGACCTTGTCGACCTCTCGACCGGGGCAAGCGTCGAAGGCTT GCGCGAGCTGTCGACCGCGTCGGCAATGCTGGTTCACCGCTTCCAGCGCCTGATCCAGTTCGGCCAGAGCATCCCGGTTC CGATCGATGTGCCGATCACTTCGGGCCCGCCGGAATCGCCGCCGCTGGTGGCATTCGTCTCCAGCCTGCAGCTGTTCGTC GACGCCTTCGTCTCGAAAGGCAGCTCGCGGCTGCTCTACGTCGCGCGCCCGCCGATCATCGTCTATGGCCTTTACGGCGC CGGCGGACCGGACCAGGGCGCCATCCGGCTGATGAACCTGACCATCGCGCGCGGTTTCCTGCTCGAGCAGGTCGACTGCT TCGCCGGCTGCGGCTGCGATGACGACGATATCTCCTGCCAGGTGCTGCTCGATTACCTGCTGTTCCTGCTCGACAGGGCG ATCGACCTCTATGCGGTCGGCACGGATCCGGACGGCCTCGGCGAACAGGAAAGGCGGGCTACCGCCGTTGGCCTCGCCAT CGGCGCGGCGCTGGACCTGACCGACCAGTTGAAGAATCCGGGCGTGCTTCTGTGTGAATTCAGCGACAAGCTGAAAAACA AGCTCAGTGTCATCCGTGATGAGTTGCTCGACCCATTCGGCGCTCCTGCGGCCTGGGACCCGGGCCTGAAGTCGCTGATG GTGCGTGAGCTGCGTATCGCCTACCAGGCTGAGGACCAGACGGAACGCCTGGTGCGTTCGCTGACGCCGCAATGCGACTT CAACGTCTTCAATTTCCCCAACAATCAGTCGCTGATCCGCTGGATGATAAGTGCGATCCTCCAGGATATGTTCGGCCTTG GCACCAATCTGCCGAGCCCGGTCCAGATGCCGTCGCCGATCGCCAGTTCCATGGCGAGCATGGGTCAGAACCGTCCCGAC TACTGGTCAGCCTGA
Upstream 100 bases:
>100_bases CCCCAGCCGCACTCGTTGCATGAGGTGAGATGTCATGGTCGACGTATTTACAGCCGCCGCCAGCCCGGTCTCGAAATTTC GGTCTCCTGCCACGGTTGCC
Downstream 100 bases:
>100_bases GCTGGCAGGAGAGGAGCACGACAATGGCTGCGAAGATTCCGTTTCCCTACCACCCGGCCAACAAGTTCCACGCCGGGGTC AAGGCCCGCTTCGAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 564; Mature: 564
Protein sequence:
>564_residues MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD YWSA
Sequences:
>Translated_564_residues MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD YWSA >Mature_564_residues MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPSSVEMAQAQDDLERDLQTLST SSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDRAMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLA GLILVAIGEGLASNGITRSTSIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPITSGPPESPPLVAFVSSLQLFV DAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNLTIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRA IDLYAVGTDPDGLGEQERRATAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSPVQMPSPIASSMASMGQNRPD YWSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61478; Mature: 61478
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPS CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC SVEMAQAQDDLERDLQTLSTSSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCHHH AMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLAGLILVAIGEGLASNGITRST HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHH SIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPIT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC SGPPESPPLVAFVSSLQLFVDAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEHHHH TIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRAIDLYAVGTDPDGLGEQERRA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHH TAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSP HHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC VQMPSPIASSMASMGQNRPDYWSA CCCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MDNLLRKTLRVSDPRDPDQIANALLNFYPEEADRDRREQAGLPYSSVPDYVPQARNTGPS CCHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCC SVEMAQAQDDLERDLQTLSTSSPLKDIRIEMIGWGRSIRQLANDGLAAARLALDSVNHDR HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHCCHHH AMSARRQLGEYSRLARYVGTLTDGSAILFRRFAQSCDVLAGLILVAIGEGLASNGITRST HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHH SIVRSAAGELQARRNAVIMALRSLTGSVESTLGQEDWPRGIEAYRNLVQQLEAGGQADLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHH ALLEENALSQAMDDLVDLSTGASVEGLRELSTASAMLVHRFQRLIQFGQSIPVPIDVPIT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCC SGPPESPPLVAFVSSLQLFVDAFVSKGSSRLLYVARPPIIVYGLYGAGGPDQGAIRLMNL CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEECCCCCCCCCCCEEHHHH TIARGFLLEQVDCFAGCGCDDDDISCQVLLDYLLFLLDRAIDLYAVGTDPDGLGEQERRA HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHEEEECCCCCCCCHHHHHH TAVGLAIGAALDLTDQLKNPGVLLCEFSDKLKNKLSVIRDELLDPFGAPAAWDPGLKSLM HHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH VRELRIAYQAEDQTERLVRSLTPQCDFNVFNFPNNQSLIRWMISAILQDMFGLGTNLPSP HHHHHHHHHCCHHHHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCC VQMPSPIASSMASMGQNRPDYWSA CCCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA