| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475736
Identifier: 13475736
GI number: 13475736
Start: 5663364
End: 5664467
Strand: Reverse
Name: 13475736
Synonym: mll6883
Alternate gene names: NA
Gene position: 5664467-5663364 (Counterclockwise)
Preceding gene: 13475737
Following gene: 13475735
Centisome position: 80.51
GC content: 62.14
Gene sequence:
>1104_bases ATGGCTAGTGAATCCAACCAGGTCATCCAACGGCTGTTCCAGCGCTTCTTCAGGGACGAGCTGGCGGGTTTGTCGCCGGC CGACCGCGCCGCTTTCGAGAGCGAATTCGAGGGTCGTTACGGGGAATTGCTTGATCGCTCGTCCAGTGCCACGACCACCA GTTTCGCCGATCTGGTCGGCTTTGGCGACGGACCGATCAAGCCGTTCGATTCGCTGCAGATGCCGCTGCTGCGCAACGAT TTCGACGAATCGATCATACCACCGCAGCTGCAGGCGTCGGCCGAGCTTTACTACATCTACCAAATGGACCGCATGAAGCT GTTCCAGGTGGTCGATGTGCTGCGCCGGCTGTTCCAGAACGGCCAGATCCGCATCCAGCGCGGCCCCGGCGCGCGCGGGC TCTACATACTCGAGAAATGGCGCCCAATCCGCTACAAGCGCCGTGACCGGCTGATCGCCTATCGACGCGTCTTCAACTAC GGTCGCGCTCCGGTGCCCGCCGGAGCCATCGTCAACCGCAGCTTCCACTTCCAGCTGGTCGCCTTCATGAATGCGATGTC GCAATATTTCCAGGATCTGACCATCGGTCAGGTTATTCGCGGCAGCTCCACCATCAACGACCGGCCTTTCGCGGCGCTGG CCACGGTGCAGCGCGTCGGCACCGACCTGCGCTATCACCTCGACCGTTCGAGCTATGGCAACATCCTGGCCCTGACCCGT GAAACCGGACAGTACGTACAGCAGATCTTCGAGCTGTTCGACGCGCCGGACATCAAGAAATCCTTCGACGCCAACACCAA ATGGGACGTTATCGAAGCCGTCGCCAACCGTCATCTGGGCGGCGCTACCGAGATGTCGGAACGGGCCAAGATGGCCGATG CGGGGCGCAGAATCCTGCAATACATCGCCGAAAACGATTTCCGCACGACGATCACGCCGGCGGAGTTCGACGCGGACGCC AAGAAGATGGGCGCGCAGGCCGACGCATGGCTGGCGGCCTACCGGCTGACACGCGAAGGGCGGCGCTTCCCCGGCCTCGA TGGCGATCGTGTGCACTGGTCATATGGGCTGAACCGCAACACCGCGTCGCGAATAGCCGCCTGA
Upstream 100 bases:
>100_bases CCAAGTGCCTGAGATCCCAAGTGCCTGAGATCCCAAGTGCTTGAGAAACCAAGTGCCTGAGAACTACGAGCAGCCAATTC GAGCAAGATGAGGTCTGATT
Downstream 100 bases:
>100_bases ACCGTTCGCCGGGACTGAAGGGTGTCTGCGATGGACCACCAACTTGCTCTTGCGGGGCGTTTCGCGGCCAAGCCGCCGAA CATCGTCATCGACGCCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MASESNQVIQRLFQRFFRDELAGLSPADRAAFESEFEGRYGELLDRSSSATTTSFADLVGFGDGPIKPFDSLQMPLLRND FDESIIPPQLQASAELYYIYQMDRMKLFQVVDVLRRLFQNGQIRIQRGPGARGLYILEKWRPIRYKRRDRLIAYRRVFNY GRAPVPAGAIVNRSFHFQLVAFMNAMSQYFQDLTIGQVIRGSSTINDRPFAALATVQRVGTDLRYHLDRSSYGNILALTR ETGQYVQQIFELFDAPDIKKSFDANTKWDVIEAVANRHLGGATEMSERAKMADAGRRILQYIAENDFRTTITPAEFDADA KKMGAQADAWLAAYRLTREGRRFPGLDGDRVHWSYGLNRNTASRIAA
Sequences:
>Translated_367_residues MASESNQVIQRLFQRFFRDELAGLSPADRAAFESEFEGRYGELLDRSSSATTTSFADLVGFGDGPIKPFDSLQMPLLRND FDESIIPPQLQASAELYYIYQMDRMKLFQVVDVLRRLFQNGQIRIQRGPGARGLYILEKWRPIRYKRRDRLIAYRRVFNY GRAPVPAGAIVNRSFHFQLVAFMNAMSQYFQDLTIGQVIRGSSTINDRPFAALATVQRVGTDLRYHLDRSSYGNILALTR ETGQYVQQIFELFDAPDIKKSFDANTKWDVIEAVANRHLGGATEMSERAKMADAGRRILQYIAENDFRTTITPAEFDADA KKMGAQADAWLAAYRLTREGRRFPGLDGDRVHWSYGLNRNTASRIAA >Mature_366_residues ASESNQVIQRLFQRFFRDELAGLSPADRAAFESEFEGRYGELLDRSSSATTTSFADLVGFGDGPIKPFDSLQMPLLRNDF DESIIPPQLQASAELYYIYQMDRMKLFQVVDVLRRLFQNGQIRIQRGPGARGLYILEKWRPIRYKRRDRLIAYRRVFNYG RAPVPAGAIVNRSFHFQLVAFMNAMSQYFQDLTIGQVIRGSSTINDRPFAALATVQRVGTDLRYHLDRSSYGNILALTRE TGQYVQQIFELFDAPDIKKSFDANTKWDVIEAVANRHLGGATEMSERAKMADAGRRILQYIAENDFRTTITPAEFDADAK KMGAQADAWLAAYRLTREGRRFPGLDGDRVHWSYGLNRNTASRIAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41875; Mature: 41744
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASESNQVIQRLFQRFFRDELAGLSPADRAAFESEFEGRYGELLDRSSSATTTSFADLVG CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHC FGDGPIKPFDSLQMPLLRNDFDESIIPPQLQASAELYYIYQMDRMKLFQVVDVLRRLFQN CCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC GQIRIQRGPGARGLYILEKWRPIRYKRRDRLIAYRRVFNYGRAPVPAGAIVNRSFHFQLV CCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH AFMNAMSQYFQDLTIGQVIRGSSTINDRPFAALATVQRVGTDLRYHLDRSSYGNILALTR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCEEEEEH ETGQYVQQIFELFDAPDIKKSFDANTKWDVIEAVANRHLGGATEMSERAKMADAGRRILQ HHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YIAENDFRTTITPAEFDADAKKMGAQADAWLAAYRLTREGRRFPGLDGDRVHWSYGLNRN HHHCCCCEEECCCHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC TASRIAA CHHHCCC >Mature Secondary Structure ASESNQVIQRLFQRFFRDELAGLSPADRAAFESEFEGRYGELLDRSSSATTTSFADLVG CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCHHHHHHHHC FGDGPIKPFDSLQMPLLRNDFDESIIPPQLQASAELYYIYQMDRMKLFQVVDVLRRLFQN CCCCCCCCHHHCCCCHHHCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHCC GQIRIQRGPGARGLYILEKWRPIRYKRRDRLIAYRRVFNYGRAPVPAGAIVNRSFHFQLV CCEEEEECCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCHHHHHH AFMNAMSQYFQDLTIGQVIRGSSTINDRPFAALATVQRVGTDLRYHLDRSSYGNILALTR HHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHEEECCCCCCCEEEEEH ETGQYVQQIFELFDAPDIKKSFDANTKWDVIEAVANRHLGGATEMSERAKMADAGRRILQ HHHHHHHHHHHHHCCCCCHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH YIAENDFRTTITPAEFDADAKKMGAQADAWLAAYRLTREGRRFPGLDGDRVHWSYGLNRN HHHCCCCEEECCCHHCCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCC TASRIAA CHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA