| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475735
Identifier: 13475735
GI number: 13475735
Start: 5662497
End: 5663342
Strand: Reverse
Name: 13475735
Synonym: mll6882
Alternate gene names: NA
Gene position: 5663342-5662497 (Counterclockwise)
Preceding gene: 13475736
Following gene: 13475734
Centisome position: 80.49
GC content: 67.02
Gene sequence:
>846_bases GTGTCTGCGATGGACCACCAACTTGCTCTTGCGGGGCGTTTCGCGGCCAAGCCGCCGAACATCGTCATCGACGCCCCGCT GGCACTGTCGCCGATGGGGCTGCTGGTGACGGTAACGCTTTCGCTATCAGCGCGGGTGTGGCTGCCGCGCGGCTTCTACA CCTTGCTCGACAATGACGAATACTATCGGCGCCGGCCCGATCAGATGGGAGGCGGTTGGCTCGCCCCCGGCACGCGCGAT GCCATCCTCAAGGAACTGACTCTGGAGCTCGAACCATGGCGCCGGGCGTGGCAGAATGGCCGCCTGTCATCCCGGGTGCA CTGGATCGGCGACGCCCAGTATGAAAGCGCGCTGCCCGAGCGTGAGGAAACAGCCCTGTTGCCGCGCTTCGAAGGCTGCT GCGCCGCGCTTGAAACACGTCTTGGCGATGTGGCAGGCACCGCCGCTCCACTCGACGAATGCGCGCGCGACGTGATCGCG CTTTCCGCCGCGCTTCAGCCCGACAGCACCTATATTCTCACCATCGCCGGCAATGACGGCGCCAGGCCGCCATTGTGCGA CTATCTCGAGCGGCTGGCATTTCCCACCAAACGCCATCCTGGAGCAATCCCCGGATGGTCCGGCCCGGCGCTGTGGCCCG CTGCGGCTCCAATCGCCGCGAGCGGCCGAAATGCCGCGATCGTCCAGGTTGTCGCCCCGGTCATCCTGGCGCTGCCCGAC GGATGGAGCGAGACCGACTGGGCGCTGGAAGATCCGGCCGACCACGATGACGGGACGCCGGACGATCCCTGGCGCAATGC CTGCGCGCTCTGGTACGATGTGGTCCCGGCGGAGGCCGCGGCATGA
Upstream 100 bases:
>100_bases CTTCCCCGGCCTCGATGGCGATCGTGTGCACTGGTCATATGGGCTGAACCGCAACACCGCGTCGCGAATAGCCGCCTGAA CCGTTCGCCGGGACTGAAGG
Downstream 100 bases:
>100_bases AACCGCCCCGCATTCACCCGGTGCACGGGCTGCGGACGAATGCGCGCGACCTGGTGATGATCAGCGTCGCAGGACAAGTG GCATCGCCGACGGAGAGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSAMDHQLALAGRFAAKPPNIVIDAPLALSPMGLLVTVTLSLSARVWLPRGFYTLLDNDEYYRRRPDQMGGGWLAPGTRD AILKELTLELEPWRRAWQNGRLSSRVHWIGDAQYESALPEREETALLPRFEGCCAALETRLGDVAGTAAPLDECARDVIA LSAALQPDSTYILTIAGNDGARPPLCDYLERLAFPTKRHPGAIPGWSGPALWPAAAPIAASGRNAAIVQVVAPVILALPD GWSETDWALEDPADHDDGTPDDPWRNACALWYDVVPAEAAA
Sequences:
>Translated_281_residues MSAMDHQLALAGRFAAKPPNIVIDAPLALSPMGLLVTVTLSLSARVWLPRGFYTLLDNDEYYRRRPDQMGGGWLAPGTRD AILKELTLELEPWRRAWQNGRLSSRVHWIGDAQYESALPEREETALLPRFEGCCAALETRLGDVAGTAAPLDECARDVIA LSAALQPDSTYILTIAGNDGARPPLCDYLERLAFPTKRHPGAIPGWSGPALWPAAAPIAASGRNAAIVQVVAPVILALPD GWSETDWALEDPADHDDGTPDDPWRNACALWYDVVPAEAAA >Mature_280_residues SAMDHQLALAGRFAAKPPNIVIDAPLALSPMGLLVTVTLSLSARVWLPRGFYTLLDNDEYYRRRPDQMGGGWLAPGTRDA ILKELTLELEPWRRAWQNGRLSSRVHWIGDAQYESALPEREETALLPRFEGCCAALETRLGDVAGTAAPLDECARDVIAL SAALQPDSTYILTIAGNDGARPPLCDYLERLAFPTKRHPGAIPGWSGPALWPAAAPIAASGRNAAIVQVVAPVILALPDG WSETDWALEDPADHDDGTPDDPWRNACALWYDVVPAEAAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30422; Mature: 30290
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAMDHQLALAGRFAAKPPNIVIDAPLALSPMGLLVTVTLSLSARVWLPRGFYTLLDNDE CCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEEEEEECCCEEEEECCCH YYRRRPDQMGGGWLAPGTRDAILKELTLELEPWRRAWQNGRLSSRVHWIGDAQYESALPE HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCHHHHHCCC REETALLPRFEGCCAALETRLGDVAGTAAPLDECARDVIALSAALQPDSTYILTIAGNDG CHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC ARPPLCDYLERLAFPTKRHPGAIPGWSGPALWPAAAPIAASGRNAAIVQVVAPVILALPD CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC GWSETDWALEDPADHDDGTPDDPWRNACALWYDVVPAEAAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCC >Mature Secondary Structure SAMDHQLALAGRFAAKPPNIVIDAPLALSPMGLLVTVTLSLSARVWLPRGFYTLLDNDE CCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEEEEEEEEEEECCCEEEEECCCH YYRRRPDQMGGGWLAPGTRDAILKELTLELEPWRRAWQNGRLSSRVHWIGDAQYESALPE HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEECCCHHHHHCCC REETALLPRFEGCCAALETRLGDVAGTAAPLDECARDVIALSAALQPDSTYILTIAGNDG CHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCC ARPPLCDYLERLAFPTKRHPGAIPGWSGPALWPAAAPIAASGRNAAIVQVVAPVILALPD CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC GWSETDWALEDPADHDDGTPDDPWRNACALWYDVVPAEAAA CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA