| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13475729
Identifier: 13475729
GI number: 13475729
Start: 5658717
End: 5658905
Strand: Reverse
Name: 13475729
Synonym: msl6876
Alternate gene names: NA
Gene position: 5658905-5658717 (Counterclockwise)
Preceding gene: 13475730
Following gene: 13475727
Centisome position: 80.43
GC content: 67.72
Gene sequence:
>189_bases GTGTGCTCGCGGGGCGGGCGGACTTTCGCCAAGAGGCGCGATAGGTCGGTCGAGAGACTTTTTCGAGGGATCCCCGCCGT TCTCGTCGAGATCCGGCAGGATTTGCTGGCGAACCGGTCCGGCACCGAGGAGTGGGCGAACCGGCTGGCGGCGGCGCTGC CCGCGCATGAGACGGAGACGGTTTCGTGA
Upstream 100 bases:
>100_bases ATCGCAAGGCAGCTCGGCATCAGCGGCTACACCGTACGCGAGCATATCAGGCGGATTTTCGCGAAGCTGAATATCGGTCG CCGCTCGGCGATTGCATCCT
Downstream 100 bases:
>100_bases GGACCAGCGCCTGACGCGCTGGCGGCCCATGTGAACTGAGCCACGGAACAGCCATGCCCCATGGCCAAGCGAAAGCCCGC GCCTGTGGTGGGAGGCGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MCSRGGRTFAKRRDRSVERLFRGIPAVLVEIRQDLLANRSGTEEWANRLAAALPAHETETVS
Sequences:
>Translated_62_residues MCSRGGRTFAKRRDRSVERLFRGIPAVLVEIRQDLLANRSGTEEWANRLAAALPAHETETVS >Mature_62_residues MCSRGGRTFAKRRDRSVERLFRGIPAVLVEIRQDLLANRSGTEEWANRLAAALPAHETETVS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6967; Mature: 6967
Theoretical pI: Translated: 11.07; Mature: 11.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCSRGGRTFAKRRDRSVERLFRGIPAVLVEIRQDLLANRSGTEEWANRLAAALPAHETET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC VS CC >Mature Secondary Structure MCSRGGRTFAKRRDRSVERLFRGIPAVLVEIRQDLLANRSGTEEWANRLAAALPAHETET CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCC VS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA