| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is ydfG [H]
Identifier: 13475727
GI number: 13475727
Start: 5656397
End: 5656876
Strand: Reverse
Name: ydfG [H]
Synonym: mll6874
Alternate gene names: 13475727
Gene position: 5656876-5656397 (Counterclockwise)
Preceding gene: 13475729
Following gene: 13475725
Centisome position: 80.4
GC content: 63.12
Gene sequence:
>480_bases ATGACTGCAAAAATCGACCTCTTCGCCGCCGCCCCTTCGCTGATGAAGAAATGGCAGCGTTCCTCGATCGAGCTCTCCGC CGCCGCCAGCCTCGAGCACAGCCTCACCGAACTGGTGAAGCTGCGTGGCTCGCAGATCAATGGCTGCGCCAACTGCATCA ATCTTCACGCCAGCGAGGCGCGCGAGAACGGGGAAACCGAGCAGCGCATCTACCTTTTGCCGGCCTGGCGCGAGGCGCCC TGCTACAGCGACCGCGAACGCGCCGCACTCGGCTGGACCGAGGCGCTGACCCGACTTTCGGAAGACACCGGCCGCGCAGG CGCCTATGAAGAGTTGAAGGCGCATTTCACCGAGGAGGAGCAGATCAAGCTCACCTTGACGATCAACATCATCAACGCCT GGAACCGTATCGCCGTCGGTTTTGGCCTCTATGCCGATCCGGCTGCCGTGAAGGCCGCCCGGGTGGCCACAACGTGCTGA
Upstream 100 bases:
>100_bases ACGGGAACGATGCATGGCGGACAAAAAAGTCCTGGCGGGCATGTCACACTGGCAGATGCTGCCTCGTCATGTGGTCGGCA CCAACAGAAGCAAGCCCACC
Downstream 100 bases:
>100_bases TGGTGTGGCTAATTAAACGGCGCGCCATGATCGCCTATCGAAGCGTACGGTAAGGCCACTTGCCGCTGTTCATCGTTTGC CCAGTGCTGTCGCTTTCGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MTAKIDLFAAAPSLMKKWQRSSIELSAAASLEHSLTELVKLRGSQINGCANCINLHASEARENGETEQRIYLLPAWREAP CYSDRERAALGWTEALTRLSEDTGRAGAYEELKAHFTEEEQIKLTLTINIINAWNRIAVGFGLYADPAAVKAARVATTC
Sequences:
>Translated_159_residues MTAKIDLFAAAPSLMKKWQRSSIELSAAASLEHSLTELVKLRGSQINGCANCINLHASEARENGETEQRIYLLPAWREAP CYSDRERAALGWTEALTRLSEDTGRAGAYEELKAHFTEEEQIKLTLTINIINAWNRIAVGFGLYADPAAVKAARVATTC >Mature_158_residues TAKIDLFAAAPSLMKKWQRSSIELSAAASLEHSLTELVKLRGSQINGCANCINLHASEARENGETEQRIYLLPAWREAPC YSDRERAALGWTEALTRLSEDTGRAGAYEELKAHFTEEEQIKLTLTINIINAWNRIAVGFGLYADPAAVKAARVATTC
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 17524; Mature: 17393
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKIDLFAAAPSLMKKWQRSSIELSAAASLEHSLTELVKLRGSQINGCANCINLHASEA CCCEEEHHHCCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHH RENGETEQRIYLLPAWREAPCYSDRERAALGWTEALTRLSEDTGRAGAYEELKAHFTEEE HCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC QIKLTLTINIINAWNRIAVGFGLYADPAAVKAARVATTC EEEEEEEEEEECCCCHHHEECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure TAKIDLFAAAPSLMKKWQRSSIELSAAASLEHSLTELVKLRGSQINGCANCINLHASEA CCEEEHHHCCHHHHHHHHHCCEEHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHH RENGETEQRIYLLPAWREAPCYSDRERAALGWTEALTRLSEDTGRAGAYEELKAHFTEEE HCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCC QIKLTLTINIINAWNRIAVGFGLYADPAAVKAARVATTC EEEEEEEEEEECCCCHHHEECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]