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The map label for this gene is fecI [C]

Identifier: 13475723

GI number: 13475723

Start: 5650410

End: 5651270

Strand: Reverse

Name: fecI [C]

Synonym: mll6869

Alternate gene names: 13475723

Gene position: 5651270-5650410 (Counterclockwise)

Preceding gene: 13475724

Following gene: 13475721

Centisome position: 80.32

GC content: 67.71

Gene sequence:

>861_bases
ATGTTGACAAGCTCAGCGCCGGACGATGCCGCAGCGGGCTTCGCCCCGCTGCGGCCGAAGCTCATGCGCGTCGCCTACCG
CATGCTGGGTTCGGTGGCGGACGCCGAGGATGCCGTGCAGGAGGCCTTCATCCGCTGGATGAAGGCCGACCGCAGTGCTG
TTCGCGAGCCCGAGGCGTTCCTGCGCCGCACGGTGACACGGCTGTGTCTCGACCAGCTCAAATCCGCGCGGCACAAACGC
GAGACCTATGTCGGCCCCTGGCTTCCCGATCCCGTTGTGGAAGAGGACGAGGTGGAGGATGTGACCTTGCCGCTGATGCT
GGTGCTCGAGCGCCTGTCTCCGCTCGAGCGGGCGGCCTTCATGCTGCACGACGTGTTCGGGCTCGGGTTCGACGAGGTCG
CGGCCGCCATCGAGCGCGACCCGGCGGCCTGCCGCCAGCTCGCGGCCCGGGCACGCGGCCATGTCCGCGAGGCGCGGCCC
CGCTTCACGGTGGAAAGGCAACGCGGCCTGGCGCTTGCCGAGGCTTTCTTCACGGCCTCGCGCAGCGGCGACATGAAGGC
GCTAGGCGCCATGCTGGCGACCGATGTCATCGCGCATGCCGACGGTGGCGGCAAGCGTCCGGCGGCCACGCTGCCGGCCC
TGGGCTTCGATGCCGTGATGAGACAGTATGAACAGGTCGCGGCCTGGCTGCGCACGCATGGCTCGAAGCTGGTCCGCATC
GGTTTCATCAACGGATTGCCGGGTTTCGTCTCCCTGGAAGCCGATGGCGAGTTCCAGACCACCGCACTCGACATCGAGGA
TGGGAAGATCGCGGCGATCTATGTCGTGCGAAACCCCGACAAGCTCAGGCACCTGCATTGA

Upstream 100 bases:

>100_bases
TGAAGTGGACTGTGTCCCTCTGGCTTCACCTCGGTCGGACGGCGGTCTTGACCGAGTTCCGGGGCTGTAGCGGCTCGATC
CGAAATCCGGCGGGTCAGCC

Downstream 100 bases:

>100_bases
GGTATGTTGATATTCAGGTGATGCCGGCCTGCAAACGGCGGCTTTCTGCGCTTCCGGTGCTCACGGACCCGAATGTCCGC
TCCGCTCCGGTTCTCGAAAG

Product: RNA polymerase sigma factor SigJ

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma Factor SigJ; Sigma Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor ECF Subfamily; RNA Polymerase Sigma Factor; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; ECF-Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma Factor Sigma; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase; RNA Polymerase ECF-Type Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; Sigma-70 Factor; RNA Polymerase Sigma Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF Sigma Factor; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MLTSSAPDDAAAGFAPLRPKLMRVAYRMLGSVADAEDAVQEAFIRWMKADRSAVREPEAFLRRTVTRLCLDQLKSARHKR
ETYVGPWLPDPVVEEDEVEDVTLPLMLVLERLSPLERAAFMLHDVFGLGFDEVAAAIERDPAACRQLAARARGHVREARP
RFTVERQRGLALAEAFFTASRSGDMKALGAMLATDVIAHADGGGKRPAATLPALGFDAVMRQYEQVAAWLRTHGSKLVRI
GFINGLPGFVSLEADGEFQTTALDIEDGKIAAIYVVRNPDKLRHLH

Sequences:

>Translated_286_residues
MLTSSAPDDAAAGFAPLRPKLMRVAYRMLGSVADAEDAVQEAFIRWMKADRSAVREPEAFLRRTVTRLCLDQLKSARHKR
ETYVGPWLPDPVVEEDEVEDVTLPLMLVLERLSPLERAAFMLHDVFGLGFDEVAAAIERDPAACRQLAARARGHVREARP
RFTVERQRGLALAEAFFTASRSGDMKALGAMLATDVIAHADGGGKRPAATLPALGFDAVMRQYEQVAAWLRTHGSKLVRI
GFINGLPGFVSLEADGEFQTTALDIEDGKIAAIYVVRNPDKLRHLH
>Mature_286_residues
MLTSSAPDDAAAGFAPLRPKLMRVAYRMLGSVADAEDAVQEAFIRWMKADRSAVREPEAFLRRTVTRLCLDQLKSARHKR
ETYVGPWLPDPVVEEDEVEDVTLPLMLVLERLSPLERAAFMLHDVFGLGFDEVAAAIERDPAACRQLAARARGHVREARP
RFTVERQRGLALAEAFFTASRSGDMKALGAMLATDVIAHADGGGKRPAATLPALGFDAVMRQYEQVAAWLRTHGSKLVRI
GFINGLPGFVSLEADGEFQTTALDIEDGKIAAIYVVRNPDKLRHLH

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31529; Mature: 31529

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTSSAPDDAAAGFAPLRPKLMRVAYRMLGSVADAEDAVQEAFIRWMKADRSAVREPEAF
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LRRTVTRLCLDQLKSARHKRETYVGPWLPDPVVEEDEVEDVTLPLMLVLERLSPLERAAF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHH
MLHDVFGLGFDEVAAAIERDPAACRQLAARARGHVREARPRFTVERQRGLALAEAFFTAS
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
RSGDMKALGAMLATDVIAHADGGGKRPAATLPALGFDAVMRQYEQVAAWLRTHGSKLVRI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GFINGLPGFVSLEADGEFQTTALDIEDGKIAAIYVVRNPDKLRHLH
EEECCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC
>Mature Secondary Structure
MLTSSAPDDAAAGFAPLRPKLMRVAYRMLGSVADAEDAVQEAFIRWMKADRSAVREPEAF
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHH
LRRTVTRLCLDQLKSARHKRETYVGPWLPDPVVEEDEVEDVTLPLMLVLERLSPLERAAF
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHH
MLHDVFGLGFDEVAAAIERDPAACRQLAARARGHVREARPRFTVERQRGLALAEAFFTAS
HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHC
RSGDMKALGAMLATDVIAHADGGGKRPAATLPALGFDAVMRQYEQVAAWLRTHGSKLVRI
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEE
GFINGLPGFVSLEADGEFQTTALDIEDGKIAAIYVVRNPDKLRHLH
EEECCCCCEEEEECCCCEEEEEEEECCCCEEEEEEEECCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA