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The map label for this gene is yafM [C]

Identifier: 13475698

GI number: 13475698

Start: 5621295

End: 5621678

Strand: Reverse

Name: yafM [C]

Synonym: mll6834

Alternate gene names: 13475698

Gene position: 5621678-5621295 (Counterclockwise)

Preceding gene: 13475699

Following gene: 13475697

Centisome position: 79.9

GC content: 64.84

Gene sequence:

>384_bases
GTGACGCAACGCGGCAACGGGCGGGCCAAGGTGTTTCTCACGCCCGAGGACTACGCGCTCTACAACAACCTGTTGGTCGA
GCATTGCCGCGCCGCCAATGTCGGCATCTGGGCTTGGTGCCTTATGCCGAACCATGTGCACTTGATCCTGACGCCGACCG
ATCCCGACGGCCTGCGCCGCGCGCTCGCCAAGCTGCACCGCGCCTATGCCGGCATCATCCATGCGCGACAGAAGAAAACC
GGTCATTTCTGGCAAGGCCGCTTCGGCGCCGTCGCGATGGATGAGGACCACCTCCTGTCGGCGGTGCGCTATGTCGGACT
GAATCCGGTGCGCGCAGGGCTGGTGAAACAGGCGGCCGATTGGCCGGGCGCATCTGACAGGTGA

Upstream 100 bases:

>100_bases
CAGTGACAGTACACTTTTACCCTGTTCGCCTCTATCTCTGCGTGTAAATTGACCGCATGGCTCGCCTTCCCGCATCGTCG
CTCCCGATCTGCCGCACCAC

Downstream 100 bases:

>100_bases
GCCCGATGGCGTTACTGATCCGCAGCCAATGAGGGACCGTCTGCCATCATCGAGCGGGCTGTTCGATCTGGTCGAGACGG
ATGCCGTGGCCTTCGAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MTQRGNGRAKVFLTPEDYALYNNLLVEHCRAANVGIWAWCLMPNHVHLILTPTDPDGLRRALAKLHRAYAGIIHARQKKT
GHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAGLVKQAADWPGASDR

Sequences:

>Translated_127_residues
MTQRGNGRAKVFLTPEDYALYNNLLVEHCRAANVGIWAWCLMPNHVHLILTPTDPDGLRRALAKLHRAYAGIIHARQKKT
GHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAGLVKQAADWPGASDR
>Mature_126_residues
TQRGNGRAKVFLTPEDYALYNNLLVEHCRAANVGIWAWCLMPNHVHLILTPTDPDGLRRALAKLHRAYAGIIHARQKKTG
HFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAGLVKQAADWPGASDR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14194; Mature: 14062

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQRGNGRAKVFLTPEDYALYNNLLVEHCRAANVGIWAWCLMPNHVHLILTPTDPDGLRR
CCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHH
ALAKLHRAYAGIIHARQKKTGHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAGLVKQAAD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCC
WPGASDR
CCCCCCC
>Mature Secondary Structure 
TQRGNGRAKVFLTPEDYALYNNLLVEHCRAANVGIWAWCLMPNHVHLILTPTDPDGLRR
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEECCCCHHHHH
ALAKLHRAYAGIIHARQKKTGHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAGLVKQAAD
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECHHHHHHHHHHCCCCHHHHHHHHHHCC
WPGASDR
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA