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The map label for this gene is yafM [C]

Identifier: 13475699

GI number: 13475699

Start: 5622700

End: 5623392

Strand: Reverse

Name: yafM [C]

Synonym: mll6836

Alternate gene names: 13475699

Gene position: 5623392-5622700 (Counterclockwise)

Preceding gene: 13475700

Following gene: 13475698

Centisome position: 79.92

GC content: 64.79

Gene sequence:

>693_bases
TTGGCTATCGCCGCGAGTAGACTGACCGCATGGCCCGGCCTTGCTCGTATCGTCGTCCCTGGTCTGCCTCACCACGTGAC
ACAGCGCGGTAACGGGCGCGCCAAGGTGTTTTTCACGACCGAGGACTACGCGCTCTACAAGATCCTGCTGGTCGAGCATT
GCCGCGCTGCCAATGTCGGCATCTGGGCGTGGTGCCTTATGCCGAACCATGTGCACCCGATCTTGACGCCGGCCGACGCC
GATGGCCTGCGCCGCGCGCTCGCCAAGGTGCACCGCGCCTATGCCGGCATCATCCATGCGCGGCAAAAGAAAACCGGACA
TTTCTGGCAAGGCCGCTTCGGCGCCGTCGCAATGGACGAGGACCACCTCCTGTCGGCGGTGCGTTATGTCGGACTGAATC
CGGTGCGTGCAGAGCTGGTGAAGCAGGCGGCCGATTGGCCCTGGTCAAGCGCTCGGGCGCATCTGACGGGCGAGCCCGAT
GGCGTTGCCGATCCGCAGCCAATGCGGGACCGTCTGCCATCATCGAGCGGGCTGTTCGACCTGATCGAGACGGATGTCGC
GGCCTTCGACGCTCTACGCAAAGCCGAGAGCATTGGCCGACCGGCGGGCGGCGAGGCGTTTCTTAGTCGGATTGCCGGGC
AAACCGGAAGAGCCGCAAAATCCAGGGAAGCGGGGCCGGCGGGGCAAAATTAG

Upstream 100 bases:

>100_bases
CCCGAATTCTTAGCTGCTCAAGTAGAGTATCTGAGATCAAATATTTGTCGATTGCCCTGACAGCGACCTACGGTGACAGT
GCACTTTTTACCCTGTTTGC

Downstream 100 bases:

>100_bases
TGCACTGTCACCGTAATTCGTCGAAAAGGACAAATGAGGCTACGTCTTCTGCGCACGTTACAGATGATTCCACAAAACCG
AGTGTTTCTGATCAAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; Conserved Domain Protein; Transposase Of ISGbem_B; Transposase Family Protein; Transposase And Inactivated Derivatives Protein; Transposase-Like Protein; Transposase Or Inactivated Derivative; Methionine-R-Sulfoxide Reductase; Transposase Domain-Containing Protein

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAIAASRLTAWPGLARIVVPGLPHHVTQRGNGRAKVFFTTEDYALYKILLVEHCRAANVGIWAWCLMPNHVHPILTPADA
DGLRRALAKVHRAYAGIIHARQKKTGHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAELVKQAADWPWSSARAHLTGEPD
GVADPQPMRDRLPSSSGLFDLIETDVAAFDALRKAESIGRPAGGEAFLSRIAGQTGRAAKSREAGPAGQN

Sequences:

>Translated_230_residues
MAIAASRLTAWPGLARIVVPGLPHHVTQRGNGRAKVFFTTEDYALYKILLVEHCRAANVGIWAWCLMPNHVHPILTPADA
DGLRRALAKVHRAYAGIIHARQKKTGHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAELVKQAADWPWSSARAHLTGEPD
GVADPQPMRDRLPSSSGLFDLIETDVAAFDALRKAESIGRPAGGEAFLSRIAGQTGRAAKSREAGPAGQN
>Mature_229_residues
AIAASRLTAWPGLARIVVPGLPHHVTQRGNGRAKVFFTTEDYALYKILLVEHCRAANVGIWAWCLMPNHVHPILTPADAD
GLRRALAKVHRAYAGIIHARQKKTGHFWQGRFGAVAMDEDHLLSAVRYVGLNPVRAELVKQAADWPWSSARAHLTGEPDG
VADPQPMRDRLPSSSGLFDLIETDVAAFDALRKAESIGRPAGGEAFLSRIAGQTGRAAKSREAGPAGQN

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24931; Mature: 24800

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIAASRLTAWPGLARIVVPGLPHHVTQRGNGRAKVFFTTEDYALYKILLVEHCRAANVG
CCCCCCHHHCCCCHHHHHCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCC
IWAWCLMPNHVHPILTPADADGLRRALAKVHRAYAGIIHARQKKTGHFWQGRFGAVAMDE
EEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECH
DHLLSAVRYVGLNPVRAELVKQAADWPWSSARAHLTGEPDGVADPQPMRDRLPSSSGLFD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCHHH
LIETDVAAFDALRKAESIGRPAGGEAFLSRIAGQTGRAAKSREAGPAGQN
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AIAASRLTAWPGLARIVVPGLPHHVTQRGNGRAKVFFTTEDYALYKILLVEHCRAANVG
CCCCCHHHCCCCHHHHHCCCCCHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCC
IWAWCLMPNHVHPILTPADADGLRRALAKVHRAYAGIIHARQKKTGHFWQGRFGAVAMDE
EEEEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECH
DHLLSAVRYVGLNPVRAELVKQAADWPWSSARAHLTGEPDGVADPQPMRDRLPSSSGLFD
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCHHH
LIETDVAAFDALRKAESIGRPAGGEAFLSRIAGQTGRAAKSREAGPAGQN
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA