| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475684
Identifier: 13475684
GI number: 13475684
Start: 5608131
End: 5609180
Strand: Direct
Name: 13475684
Synonym: mlr6815
Alternate gene names: NA
Gene position: 5608131-5609180 (Clockwise)
Preceding gene: 13475683
Following gene: 13475685
Centisome position: 79.71
GC content: 67.33
Gene sequence:
>1050_bases GTGGCGACATTCAACGCGCAATTTCTGGATTTTTTCGACTGGTGGCTCGATGAGCTGCGAGGGGTCTGGACGCGGGTTGT TCCCGGGAAAGCACAAGCTTCGACCGTCGACTGGATCGTCAGCCTGGCGGATGACGGCATTCGTGTGCGCGAGGCCAAGG CGCCGGAGTTCCAGTCGATCCCGCTGGCGCTCACGGCTTCCTCCGACGAGATCCTGGCGCTGCTGCAGGGCGGGACCCGG CGCAGGCGTTCGAGCTTCGATATCAGGGTCCAGCCAGGCCTGTTCCTGACCCGGCAGCTCTCGGCGCGGCGTCTGCCTGT CCGGCAGGCGCGCGACATGGCCGAACTCGACCTTATGGCTTCGACGCCGATCGACCCGGCGCAGGTGCATGTCGTGTTCG CCGCGGCGGCGGAACAGGACAGCGCCTACCATGTCGTCAAGGCCAAGACGCTTGCCGCCGTGCTGGACGCGGTGCGCCGG GCCGGTGGCTCGGTCCGCTGCTTGTCGTTGTCGCAGCCCGAAAACACGCTGCGCGCCGATCCGCTCAGCCTGGCCGCCAT CTGGCCGCCGACGGCGCGCGACCGGCGTGCCAGGACCGCCTGGATTGCGGCCCTTTCGGTGCTGGCCGGGGCGGTGCTGG TGACCTTTGCGCATGCGCATTGGCGCGCCTGGCAGGCCGAGGCCGAACTGGATACGCAGATCGCCGATGCGCAGGTCCTG GCCAAAGCGGCGCGCGCCTCGCTGCAGAAGCGCCAGGCCGGCATCGAGCGGATCGAAAAGATCCGCCAGGAAAAGAAGAC GACGGCGTCGCTGGTGCGCGTCTGGGCCGAGTTGACGCATCTGCTGCCCGACACGGCCTGGCTGACCGATCTCTCGGCCA AGGGCGACGACCTGACCATTTCAGGCTTTTCCACCTCGGCCGCCGAACTGATCCAGCCGATCGACGCCTCGCCGCTGTTT TCGGCGCCTGAATTCGCCTCGCCGGTGGTCAAGGTTCCCGGTCAGGATGGCGAGCACTTCACCATTTCGGCCAAGATCGG GGCGCTCTGA
Upstream 100 bases:
>100_bases CTCTCCCGCGCCTTCGCAAATATCCGCATGGCACCAGCATCTGTAGTAGTCTCAGCCTGAACCTCGGCTGAGAATCAGCC GGGGCGGCGGGTGGTTGATT
Downstream 100 bases:
>100_bases CGATGCTCTCCACCATCCTCAACACAAGGCCGACGATCCGCCGCCTGATCGCGCTGGCGATCGCCGCGGTCACGGCCTGC GTGCTTGCCTGGGTGGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 348
Protein sequence:
>349_residues MATFNAQFLDFFDWWLDELRGVWTRVVPGKAQASTVDWIVSLADDGIRVREAKAPEFQSIPLALTASSDEILALLQGGTR RRRSSFDIRVQPGLFLTRQLSARRLPVRQARDMAELDLMASTPIDPAQVHVVFAAAAEQDSAYHVVKAKTLAAVLDAVRR AGGSVRCLSLSQPENTLRADPLSLAAIWPPTARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAELDTQIADAQVL AKAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDLSAKGDDLTISGFSTSAAELIQPIDASPLF SAPEFASPVVKVPGQDGEHFTISAKIGAL
Sequences:
>Translated_349_residues MATFNAQFLDFFDWWLDELRGVWTRVVPGKAQASTVDWIVSLADDGIRVREAKAPEFQSIPLALTASSDEILALLQGGTR RRRSSFDIRVQPGLFLTRQLSARRLPVRQARDMAELDLMASTPIDPAQVHVVFAAAAEQDSAYHVVKAKTLAAVLDAVRR AGGSVRCLSLSQPENTLRADPLSLAAIWPPTARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAELDTQIADAQVL AKAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDLSAKGDDLTISGFSTSAAELIQPIDASPLF SAPEFASPVVKVPGQDGEHFTISAKIGAL >Mature_348_residues ATFNAQFLDFFDWWLDELRGVWTRVVPGKAQASTVDWIVSLADDGIRVREAKAPEFQSIPLALTASSDEILALLQGGTRR RRSSFDIRVQPGLFLTRQLSARRLPVRQARDMAELDLMASTPIDPAQVHVVFAAAAEQDSAYHVVKAKTLAAVLDAVRRA GGSVRCLSLSQPENTLRADPLSLAAIWPPTARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAELDTQIADAQVLA KAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDLSAKGDDLTISGFSTSAAELIQPIDASPLFS APEFASPVVKVPGQDGEHFTISAKIGAL
Specific function: Unknown
COG id: COG3166
COG function: function code NU; Tfp pilus assembly protein PilN
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38067; Mature: 37936
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATFNAQFLDFFDWWLDELRGVWTRVVPGKAQASTVDWIVSLADDGIRVREAKAPEFQSI CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC PLALTASSDEILALLQGGTRRRRSSFDIRVQPGLFLTRQLSARRLPVRQARDMAELDLMA CEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHCCCHHHHHHHHHHHHHH STPIDPAQVHVVFAAAAEQDSAYHVVKAKTLAAVLDAVRRAGGSVRCLSLSQPENTLRAD CCCCCHHHEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCC PLSLAAIWPPTARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAELDTQIADAQVL CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDLSAKGDDLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEE SGFSTSAAELIQPIDASPLFSAPEFASPVVKVPGQDGEHFTISAKIGAL ECCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC >Mature Secondary Structure ATFNAQFLDFFDWWLDELRGVWTRVVPGKAQASTVDWIVSLADDGIRVREAKAPEFQSI CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC PLALTASSDEILALLQGGTRRRRSSFDIRVQPGLFLTRQLSARRLPVRQARDMAELDLMA CEEEECCCHHHHHHHHCCCCCCCCCCEEEECCCEEEEHHHHHHCCCHHHHHHHHHHHHHH STPIDPAQVHVVFAAAAEQDSAYHVVKAKTLAAVLDAVRRAGGSVRCLSLSQPENTLRAD CCCCCHHHEEEEEEEECCCCCCEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCCC PLSLAAIWPPTARDRRARTAWIAALSVLAGAVLVTFAHAHWRAWQAEAELDTQIADAQVL CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AKAARASLQKRQAGIERIEKIRQEKKTTASLVRVWAELTHLLPDTAWLTDLSAKGDDLTI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEEE SGFSTSAAELIQPIDASPLFSAPEFASPVVKVPGQDGEHFTISAKIGAL ECCCCCHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA