Click here to switch to the map view.

The map label for this gene is 13475672

Identifier: 13475672

GI number: 13475672

Start: 5595306

End: 5596316

Strand: Direct

Name: 13475672

Synonym: mlr6799

Alternate gene names: NA

Gene position: 5595306-5596316 (Clockwise)

Preceding gene: 13475671

Following gene: 13475674

Centisome position: 79.52

GC content: 61.82

Gene sequence:

>1011_bases
ATGCTCAGACGCTCACTCATCAAGGCAGCCACGCTTGCGGCCTGTGTCGCGACACTCGGCTTTTCGAGCGCGGCCCTGGC
GGCCGACAAGGTCAACGTCCAGCTCGACTGGGTGGTGCGCGGCAACCATGCCATGTTCTTCGTCGGCAAGGAAAAAGGCT
TCTTCGCCAAGAACGACATCGACGTCGCCGAGATCCGCAAGGGATCGGGCTCGCCGGACGCCATGCGGCTGGTGGGCAAT
GAGAACGCGGATTTCGGTTTCGGCGATCTTCCCACGCTCGCCGTCGCGCGGTCGCAGAATGTTCCCGTCGTGGCGCTGGC
CGCCGTCAACCAGCACTCGCCGCTGGGCATCATTTCGCTTGCCAAGACGTTGAAGCTGGCAAAGCCGTCCGATCTCAAGG
GTCTCACCATCGGCATTCATCCTGCCGGTTCAACCTACATCTTCTTCAAGGGCTTCCTGGCGGCCAATGGCCTGACCGAG
AAGGACATGACGCTGAACAGCGTCTCGCCGCCCTATGAAAGCTATCTGCTTCTGGGCAGGGTCCAGACGGTGGTCGGCTA
TGTCGACGCCGAGGTTCCCGAACTAGAGGCCAAGGCCGGCGGTCCTGGTTCGCTCAGCATCATGATGGGTTCGGACCATG
GCTGGAAGGCCTATGGCTCGGGCCTGTTCACCTCGCAGAAGATGATCAAGGACAAGCCCGAAATCGTCGCCCGCTTCGTC
AAGGCGTACAGGGAGGCCTTCGACTATGTCGTGGCGCACCCCGAAGAGGCAGCCGAGATCACCGCCAAGGCCGCACCCGG
CTACGCCGACAAGAAGGATGTGCTTCTGGCGCAGATCAACGCAGACATCGCGTCGACCTTCACCAGCCCGGACACCAAGG
AACACGGCCTCGGCTGGATGACGAAGACGCAGTGGGAGGAAACGCTGAAGACGCTCACCGATCAGGGCGTGCTCAAGGCG
GCCCTGTCGGCGGACGACGTCTTTACCGACAAATTCCTGGCCAAGGAATAG

Upstream 100 bases:

>100_bases
CTACTACGCGGCCGAAATTCTCGAACGCATCGTGGTGCCGTGGGCGCCGAAATTCAGCCAGTCCTAGGTCAGCTCTCAAT
CAACAAAAAAGGGAACAAAA

Downstream 100 bases:

>100_bases
GCCGCGCTATGTCGCGAGCCAACGGATCGATGAGCGCCTACCGGCACGCCAGCGTGTCCTGCTCCACGCCGCAGGACACA
GTGCGTGCTCCCTTGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MLRRSLIKAATLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDIDVAEIRKGSGSPDAMRLVGN
ENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISLAKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTE
KDMTLNSVSPPYESYLLLGRVQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFV
KAYREAFDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIASTFTSPDTKEHGLGWMTKTQWEETLKTLTDQGVLKA
ALSADDVFTDKFLAKE

Sequences:

>Translated_336_residues
MLRRSLIKAATLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDIDVAEIRKGSGSPDAMRLVGN
ENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISLAKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTE
KDMTLNSVSPPYESYLLLGRVQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFV
KAYREAFDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIASTFTSPDTKEHGLGWMTKTQWEETLKTLTDQGVLKA
ALSADDVFTDKFLAKE
>Mature_336_residues
MLRRSLIKAATLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDIDVAEIRKGSGSPDAMRLVGN
ENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISLAKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTE
KDMTLNSVSPPYESYLLLGRVQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFV
KAYREAFDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIASTFTSPDTKEHGLGWMTKTQWEETLKTLTDQGVLKA
ALSADDVFTDKFLAKE

Specific function: Probably involved in thiamine biosynthesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NMT1 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319957, Length=267, Percent_Identity=25.4681647940075, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321050, Length=267, Percent_Identity=25.4681647940075, Blast_Score=73, Evalue=7e-14,
Organism=Saccharomyces cerevisiae, GI6323997, Length=240, Percent_Identity=25.4166666666667, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322616, Length=267, Percent_Identity=25.0936329588015, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015168 [H]

Pfam domain/function: PF09084 NMT1 [H]

EC number: NA

Molecular weight: Translated: 35945; Mature: 35945

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRSLIKAATLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDI
CCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEEEECCEEEEEEECCCCCEECCCC
DVAEIRKGSGSPDAMRLVGNENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISL
CHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHEEECCCCCCEEEEEECCCCCCCHHHHH
AKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTEKDMTLNSVSPPYESYLLLGR
HHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCCCEECCCCCCHHHHHHHHH
VQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFV
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHHCCCHHHHHHHH
KAYREAFDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIASTFTSPDTKEHGLGWM
HHHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHCCCCCC
TKTQWEETLKTLTDQGVLKAALSADDVFTDKFLAKE
CHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCC
>Mature Secondary Structure
MLRRSLIKAATLAACVATLGFSSAALAADKVNVQLDWVVRGNHAMFFVGKEKGFFAKNDI
CCHHHHHHHHHHHHHHHHHCCCHHHEEEEEEEEEEEEEEECCEEEEEEECCCCCEECCCC
DVAEIRKGSGSPDAMRLVGNENADFGFGDLPTLAVARSQNVPVVALAAVNQHSPLGIISL
CHHHHHCCCCCCCCEEEECCCCCCCCCCCCCHHEEECCCCCCEEEEEECCCCCCCHHHHH
AKTLKLAKPSDLKGLTIGIHPAGSTYIFFKGFLAANGLTEKDMTLNSVSPPYESYLLLGR
HHHHHCCCCCCCCEEEEEEECCCCEEEEEEEEHHCCCCCCCCCEECCCCCCHHHHHHHHH
VQTVVGYVDAEVPELEAKAGGPGSLSIMMGSDHGWKAYGSGLFTSQKMIKDKPEIVARFV
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCCCHHHCCCCCHHHHHHCCCHHHHHHHH
KAYREAFDYVVAHPEEAAEITAKAAPGYADKKDVLLAQINADIASTFTSPDTKEHGLGWM
HHHHHHHHHHHCCCHHHHHEEHHCCCCCCCCCCEEEEEECCHHHHHCCCCCCHHCCCCCC
TKTQWEETLKTLTDQGVLKAALSADDVFTDKFLAKE
CHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]