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The map label for this gene is ssuC [C]

Identifier: 13475671

GI number: 13475671

Start: 5594445

End: 5595272

Strand: Direct

Name: ssuC [C]

Synonym: mlr6798

Alternate gene names: 13475671

Gene position: 5594445-5595272 (Clockwise)

Preceding gene: 13475670

Following gene: 13475672

Centisome position: 79.51

GC content: 63.65

Gene sequence:

>828_bases
GTGAGCGATCAACCCATCACCAATCTCTCCGAGTCGCGACCCGAGTCGCGGTTTGCCTCGAGCTGGGGCGCGGCGACAGG
CAGCTGGCTTCCGGCGGTCATCCTTCTGCTGGTGACGATCGTGGTGTGGGAAGCCGTGGTGCGGATTTTCGCCATATCCG
CCTTCATCATTCCCGCCCCGTCCGAGATCGCGCAATCGCTGGTCGCGCAATGGGGAACGCTTATGCAGGCGACGCTGGTG
ACGGCGGGCGAGATCCTGTTCGGGTTCCTTGTCTCTGTCGTGGTCGGCATTGCCATTGCCTTGGTCATCGTACGCTTCGA
CTGGCTGGGGCGAGCGCTCTATCCGCTGGTGGTGCTGTTCCAGAACGTGCCCAAGGTGGCACTGGCGCCGATCTTCATCC
TCTGGTTCGGCTATGGGCTCGCGCCCAAGATCGGCCTGATCCTGGTCATCGCCTTCTTCCCGGTGACCTTGTCGATGCTG
GCGGGCATGCAGTCGGTCGATCGCTCGCTGCTGTCGCTGATGAATTCGGTCGGCGCCAGCCGCACGCAGATCCTGTTTAG
GATTCGCGTTCCGCATTCGCTGCCCAACCTGATGGCTGGCACCAAGATCGCCGCGACGCTCAGCGTCATCGGCGCCATCG
TCGGCGAATTCGCCGGCGCCTCGGACGGGCTCGGCTACGTCATCCAGTTCGCCTCGACCCAGCTCGACACCGCGCTGGTC
TTCGCGGCCCTGCTCCTCGTTTCGGTGCTGGGCATCGCCTTCTACTACGCGGCCGAAATTCTCGAACGCATCGTGGTGCC
GTGGGCGCCGAAATTCAGCCAGTCCTAG

Upstream 100 bases:

>100_bases
ATCCGCGCGACCTGACGGTCACCGAGGATCCGGAGTTCGTCAGGCTCGTGGTTCAACTGCGCACCATGCTGCGCGCCAGC
CATCAACCGGGAGGTGCGTC

Downstream 100 bases:

>100_bases
GTCAGCTCTCAATCAACAAAAAAGGGAACAAAAATGCTCAGACGCTCACTCATCAAGGCAGCCACGCTTGCGGCCTGTGT
CGCGACACTCGGCTTTTCGA

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MSDQPITNLSESRPESRFASSWGAATGSWLPAVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLV
TAGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSML
AGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEFAGASDGLGYVIQFASTQLDTALV
FAALLLVSVLGIAFYYAAEILERIVVPWAPKFSQS

Sequences:

>Translated_275_residues
MSDQPITNLSESRPESRFASSWGAATGSWLPAVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLV
TAGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSML
AGMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEFAGASDGLGYVIQFASTQLDTALV
FAALLLVSVLGIAFYYAAEILERIVVPWAPKFSQS
>Mature_274_residues
SDQPITNLSESRPESRFASSWGAATGSWLPAVILLLVTIVVWEAVVRIFAISAFIIPAPSEIAQSLVAQWGTLMQATLVT
AGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLFQNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSMLA
GMQSVDRSLLSLMNSVGASRTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEFAGASDGLGYVIQFASTQLDTALVF
AALLLVSVLGIAFYYAAEILERIVVPWAPKFSQS

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=236, Percent_Identity=28.8135593220339, Blast_Score=104, Evalue=7e-24,
Organism=Escherichia coli, GI1786564, Length=240, Percent_Identity=28.75, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 29421; Mature: 29290

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SDQPITNLSESRPESRFASSWGAATGSWLPAVILLLVTIVVWEAVVRIFAISAFIIPAP
CCCCCCCCHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
SEIAQSLVAQWGTLMQATLVTAGEILFGFLVSVVVGIAIALVIVRFDWLGRALYPLVVLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QNVPKVALAPIFILWFGYGLAPKIGLILVIAFFPVTLSMLAGMQSVDRSLLSLMNSVGAS
HCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RTQILFRIRVPHSLPNLMAGTKIAATLSVIGAIVGEFAGASDGLGYVIQFASTQLDTALV
HHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
FAALLLVSVLGIAFYYAAEILERIVVPWAPKFSQS
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]