| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is dhaB [H]
Identifier: 13475607
GI number: 13475607
Start: 5511921
End: 5514191
Strand: Reverse
Name: dhaB [H]
Synonym: mll6722
Alternate gene names: 13475607
Gene position: 5514191-5511921 (Counterclockwise)
Preceding gene: 13475608
Following gene: 13475606
Centisome position: 78.37
GC content: 64.29
Gene sequence:
>2271_bases ATGACGCCGAAACTGAACCGCTGGAAGCGCTTCGCCGACTGGGACGAGCGGCCGTTGCGTCTGGACAAGTTTGCGGCGGA AGACCCTGCCAACGGCTTCTCCGCTTTCTCCAGCCCAGCCGATCCGAAACCAGGCATCGGCATCAAGGACGGGCGAGTCA TATCCCTCGATGGCGTGCTCGAACACGACTACGATATGATCGACCGCTTCATCGCCCGCCATCACATCGATCCGGAGGTG GCACCTGAAGCGATGGCGCTGGACTCGGCGACCGTCGCCCGCTGGCTGGTCGACATGAACGTGCCGCGCGAGACGCTGGT GCGGCTTGCCCACGGCATGACACCTGCGAAACTCGCTGAGGTCGTGTCGCAGCTCAACGCCCTGGAGATCGCCTTCGCCT ACTCGAAGATGCGAGCCCGCAAGACACCGGGCAACCAGGCACACGTCACCAACGCCAAGGACGATCCGCTGCAGCTCGCC GCCGATGCCGCGACCGCCGTCGCCTTTGGCTTCGACGAGATCGAGACGACGATGCGCGTTTCGCGCAACGCCTGGTCCAA CGCGGTGGCGTGTGCGGTAGGCGGCGCGGTCGGTCGCTGGGGAACGCTGTTCCAATGCTCCAGCGAGGAAGCCGAAGAGC TGCGCATCGCCATGGCGGGCTTTACCTCCTACGCCGAAACCGTTTCCGTCTACGGCACTGAAAAGTCGTTCACCGATGGC GACGACACGCCGTGGTCCAAGGCATTTCTGGCCGCCGCCTACGCCTCGCGCGGCGTCAAGATGCGCTGTACGTCTGGTGC CGGCTCCGAGTTGCTGATGGGCTTCCATGAAGCCAAGTCGCTGCTCTACCTGGAGGCGCGCTGCCTCTGCCTGCAGCGCG GCATGGGGGTGCAAGGCACGCAGAATGGCGGCATCGACGGAGCGCCTTTGACCGCCACTATACCCGGCGGTGTTCGCGAG CTGATGGCCGAGAACCTCATCGCCGTCTGGCTCGATCTCGAATGCGCGTCTGGCAATGACGCGCGGTCGACCGAATCGGA AATTCGCGTCGGCGCCAAAATCCTTCCCTACCTGATTGCCGGCTCGGACCTGATCTGCTCCGGGATGGGATCGATCCTGA AATACGACAACTCGTTCAACCCGTCGCTAATCAACGGCGAGGAATTGGAAGATTATCTTGTGCTGCAGCGCGATTTCGAG GCCGATGGCGGGTTGACGCCGCTGCCCGAGTCACGCGCGATCGAGCTGCGCGAGCGGGCGGTGGAGGCGATCGCCGCCGT GTTCGAGGAACTCGGCCTTTCCTCACCGACCGAGGACATGAAGAGCAGCGTGGTCTACGCTTCCGGTTCCGACGATACAC GCAGCCTGATGCCGCGCGACGTCAGCTTTATCAGCGAAGCCATCAAGGAGCGCGGCATCACCGTGATCGATGTGGTCAAG GCGCTGGCCAAGCGTGGATTCCGCGAAGAGGCGGAGAACCTCCTCGACGTGGTCAAGCTGCGCCTTTCCGGTGACTATCT CCAGACATCGGCGATGATCCGCAATGGGCGGATCGTCAGTGCGGTCAACGATCCAAACGACTATCTCGGCCCGGGTTCCG GCTACCGCGTGTCCGAAGAACGGCGCCTGCAGCTCAATGACATCCGCGATGTGCTGGACCAGAAGGAAGTGCTGCGCTCG GAAGCCCTGCACGAGAAGGACGAGGCAAGGCACATCCGCTATCGCAACCTGGGGCCCGCGGCCAACGGATCGGCGAAGGA CGATGTGGTCATCGGCATCAGCCCGGCTTTCGGGCTGAAGCTTTACCGGACGACGGCCGGACATCGGCTCTCCGAAGTGC TCGGCGCCATGCTCGATGCGATCCACGCACGCGGGCTCAAGGCGCGCGTCGTCCGCTTCCGCCATACGGCCGATACCTCC TTCCTCGGCCTGTCCGCCGCGCGGCTTGCCGGCAGCGGCATAGGCATCGGCATCCAGGCCAAGGGCACGGCCGTCATCCA CCAGCGTGACCGCCAGCCGCACAACAACCTCGAACTGTTTTCCAATGCGCCGATCACCCGGCTCGAGCACTATCGCGCGC TGGGTGCCAATGCGGCGGCCTATGCGCTGGGCGAAATGCCGGAGCCCGTCGTGGTGCCGCAGCGGGGCGAGGCCATGGGG TCTCGCTACCACGCCCGCGTCGCCCTCATCTACGCCATCGAAACCGGACTGACGGAGGCTGGTGCGGCTCCCGAAGAGGT CGACGTCATCCTGACAGGAGTGAAATCGTGA
Upstream 100 bases:
>100_bases GAGCCCGTGGCGTGCGCCCCCTTGGCCGGCGGTCGATCCATGGTCATTGTGTGGCGGGTAAGCATTCACTAGTCTTTCGG CTGGGTCGAGGATCGCACGC
Downstream 100 bases:
>100_bases CCCACACGCGCGCCGACTATCCGCTCGCCGAAACACAGCCCGGCGCCGTAAAGGGCAAGCGCGGCAAGTCGCTTGCCGAG ATAACGCTGGATTCGGTGCT
Product: glycerol dehydratase large subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 756; Mature: 755
Protein sequence:
>756_residues MTPKLNRWKRFADWDERPLRLDKFAAEDPANGFSAFSSPADPKPGIGIKDGRVISLDGVLEHDYDMIDRFIARHHIDPEV APEAMALDSATVARWLVDMNVPRETLVRLAHGMTPAKLAEVVSQLNALEIAFAYSKMRARKTPGNQAHVTNAKDDPLQLA ADAATAVAFGFDEIETTMRVSRNAWSNAVACAVGGAVGRWGTLFQCSSEEAEELRIAMAGFTSYAETVSVYGTEKSFTDG DDTPWSKAFLAAAYASRGVKMRCTSGAGSELLMGFHEAKSLLYLEARCLCLQRGMGVQGTQNGGIDGAPLTATIPGGVRE LMAENLIAVWLDLECASGNDARSTESEIRVGAKILPYLIAGSDLICSGMGSILKYDNSFNPSLINGEELEDYLVLQRDFE ADGGLTPLPESRAIELRERAVEAIAAVFEELGLSSPTEDMKSSVVYASGSDDTRSLMPRDVSFISEAIKERGITVIDVVK ALAKRGFREEAENLLDVVKLRLSGDYLQTSAMIRNGRIVSAVNDPNDYLGPGSGYRVSEERRLQLNDIRDVLDQKEVLRS EALHEKDEARHIRYRNLGPAANGSAKDDVVIGISPAFGLKLYRTTAGHRLSEVLGAMLDAIHARGLKARVVRFRHTADTS FLGLSAARLAGSGIGIGIQAKGTAVIHQRDRQPHNNLELFSNAPITRLEHYRALGANAAAYALGEMPEPVVVPQRGEAMG SRYHARVALIYAIETGLTEAGAAPEEVDVILTGVKS
Sequences:
>Translated_756_residues MTPKLNRWKRFADWDERPLRLDKFAAEDPANGFSAFSSPADPKPGIGIKDGRVISLDGVLEHDYDMIDRFIARHHIDPEV APEAMALDSATVARWLVDMNVPRETLVRLAHGMTPAKLAEVVSQLNALEIAFAYSKMRARKTPGNQAHVTNAKDDPLQLA ADAATAVAFGFDEIETTMRVSRNAWSNAVACAVGGAVGRWGTLFQCSSEEAEELRIAMAGFTSYAETVSVYGTEKSFTDG DDTPWSKAFLAAAYASRGVKMRCTSGAGSELLMGFHEAKSLLYLEARCLCLQRGMGVQGTQNGGIDGAPLTATIPGGVRE LMAENLIAVWLDLECASGNDARSTESEIRVGAKILPYLIAGSDLICSGMGSILKYDNSFNPSLINGEELEDYLVLQRDFE ADGGLTPLPESRAIELRERAVEAIAAVFEELGLSSPTEDMKSSVVYASGSDDTRSLMPRDVSFISEAIKERGITVIDVVK ALAKRGFREEAENLLDVVKLRLSGDYLQTSAMIRNGRIVSAVNDPNDYLGPGSGYRVSEERRLQLNDIRDVLDQKEVLRS EALHEKDEARHIRYRNLGPAANGSAKDDVVIGISPAFGLKLYRTTAGHRLSEVLGAMLDAIHARGLKARVVRFRHTADTS FLGLSAARLAGSGIGIGIQAKGTAVIHQRDRQPHNNLELFSNAPITRLEHYRALGANAAAYALGEMPEPVVVPQRGEAMG SRYHARVALIYAIETGLTEAGAAPEEVDVILTGVKS >Mature_755_residues TPKLNRWKRFADWDERPLRLDKFAAEDPANGFSAFSSPADPKPGIGIKDGRVISLDGVLEHDYDMIDRFIARHHIDPEVA PEAMALDSATVARWLVDMNVPRETLVRLAHGMTPAKLAEVVSQLNALEIAFAYSKMRARKTPGNQAHVTNAKDDPLQLAA DAATAVAFGFDEIETTMRVSRNAWSNAVACAVGGAVGRWGTLFQCSSEEAEELRIAMAGFTSYAETVSVYGTEKSFTDGD DTPWSKAFLAAAYASRGVKMRCTSGAGSELLMGFHEAKSLLYLEARCLCLQRGMGVQGTQNGGIDGAPLTATIPGGVREL MAENLIAVWLDLECASGNDARSTESEIRVGAKILPYLIAGSDLICSGMGSILKYDNSFNPSLINGEELEDYLVLQRDFEA DGGLTPLPESRAIELRERAVEAIAAVFEELGLSSPTEDMKSSVVYASGSDDTRSLMPRDVSFISEAIKERGITVIDVVKA LAKRGFREEAENLLDVVKLRLSGDYLQTSAMIRNGRIVSAVNDPNDYLGPGSGYRVSEERRLQLNDIRDVLDQKEVLRSE ALHEKDEARHIRYRNLGPAANGSAKDDVVIGISPAFGLKLYRTTAGHRLSEVLGAMLDAIHARGLKARVVRFRHTADTSF LGLSAARLAGSGIGIGIQAKGTAVIHQRDRQPHNNLELFSNAPITRLEHYRALGANAAAYALGEMPEPVVVPQRGEAMGS RYHARVALIYAIETGLTEAGAAPEEVDVILTGVKS
Specific function: Unknown
COG id: COG4909
COG function: function code Q; Propanediol dehydratase, large subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the diol/glycerol dehydratase large subunit family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR003206 - ProDom: PD025428 [H]
Pfam domain/function: PF02286 Dehydratase_LU [H]
EC number: =4.2.1.30 [H]
Molecular weight: Translated: 81891; Mature: 81759
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPKLNRWKRFADWDERPLRLDKFAAEDPANGFSAFSSPADPKPGIGIKDGRVISLDGVL CCCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCH EHDYDMIDRFIARHHIDPEVAPEAMALDSATVARWLVDMNVPRETLVRLAHGMTPAKLAE HCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH VVSQLNALEIAFAYSKMRARKTPGNQAHVTNAKDDPLQLAADAATAVAFGFDEIETTMRV HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH SRNAWSNAVACAVGGAVGRWGTLFQCSSEEAEELRIAMAGFTSYAETVSVYGTEKSFTDG HHHHHCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC DDTPWSKAFLAAAYASRGVKMRCTSGAGSELLMGFHEAKSLLYLEARCLCLQRGMGVQGT CCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QNGGIDGAPLTATIPGGVRELMAENLIAVWLDLECASGNDARSTESEIRVGAKILPYLIA CCCCCCCCCEEEECCHHHHHHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC GSDLICSGMGSILKYDNSFNPSLINGEELEDYLVLQRDFEADGGLTPLPESRAIELRERA CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH VEAIAAVFEELGLSSPTEDMKSSVVYASGSDDTRSLMPRDVSFISEAIKERGITVIDVVK HHHHHHHHHHHCCCCCCHHHHCCEEEECCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHH ALAKRGFREEAENLLDVVKLRLSGDYLQTSAMIRNGRIVSAVNDPNDYLGPGSGYRVSEE HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECHH RRLQLNDIRDVLDQKEVLRSEALHEKDEARHIRYRNLGPAANGSAKDDVVIGISPAFGLK HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEE LYRTTAGHRLSEVLGAMLDAIHARGLKARVVRFRHTADTSFLGLSAARLAGSGIGIGIQA EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCEEEEEE KGTAVIHQRDRQPHNNLELFSNAPITRLEHYRALGANAAAYALGEMPEPVVVPQRGEAMG CCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCCHHC SRYHARVALIYAIETGLTEAGAAPEEVDVILTGVKS CHHEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCC >Mature Secondary Structure TPKLNRWKRFADWDERPLRLDKFAAEDPANGFSAFSSPADPKPGIGIKDGRVISLDGVL CCCCHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEEECCCH EHDYDMIDRFIARHHIDPEVAPEAMALDSATVARWLVDMNVPRETLVRLAHGMTPAKLAE HCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHH VVSQLNALEIAFAYSKMRARKTPGNQAHVTNAKDDPLQLAADAATAVAFGFDEIETTMRV HHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHHHHHHHCHHHHHHHHHH SRNAWSNAVACAVGGAVGRWGTLFQCSSEEAEELRIAMAGFTSYAETVSVYGTEKSFTDG HHHHHCCHHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCC DDTPWSKAFLAAAYASRGVKMRCTSGAGSELLMGFHEAKSLLYLEARCLCLQRGMGVQGT CCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC QNGGIDGAPLTATIPGGVRELMAENLIAVWLDLECASGNDARSTESEIRVGAKILPYLIA CCCCCCCCCEEEECCHHHHHHHHCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHC GSDLICSGMGSILKYDNSFNPSLINGEELEDYLVLQRDFEADGGLTPLPESRAIELRERA CCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH VEAIAAVFEELGLSSPTEDMKSSVVYASGSDDTRSLMPRDVSFISEAIKERGITVIDVVK HHHHHHHHHHHCCCCCCHHHHCCEEEECCCCCHHHHCHHHHHHHHHHHHHCCCHHHHHHH ALAKRGFREEAENLLDVVKLRLSGDYLQTSAMIRNGRIVSAVNDPNDYLGPGSGYRVSEE HHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCCCEECHH RRLQLNDIRDVLDQKEVLRSEALHEKDEARHIRYRNLGPAANGSAKDDVVIGISPAFGLK HCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCEE LYRTTAGHRLSEVLGAMLDAIHARGLKARVVRFRHTADTSFLGLSAARLAGSGIGIGIQA EEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCHHHHHHHHHCCCCCEEEEEE KGTAVIHQRDRQPHNNLELFSNAPITRLEHYRALGANAAAYALGEMPEPVVVPQRGEAMG CCEEEEEECCCCCCCCCEEECCCCHHHHHHHHHHCCCHHHHHHCCCCCCEECCCCCCHHC SRYHARVALIYAIETGLTEAGAAPEEVDVILTGVKS CHHEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8824629 [H]