| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475608
Identifier: 13475608
GI number: 13475608
Start: 5514357
End: 5516000
Strand: Reverse
Name: 13475608
Synonym: mll6723
Alternate gene names: NA
Gene position: 5516000-5514357 (Counterclockwise)
Preceding gene: 13475612
Following gene: 13475607
Centisome position: 78.4
GC content: 61.5
Gene sequence:
>1644_bases ATGAAGCGGCATTGGCTGTTCGGGCTGTGGCATTCGCTCTCGGCAGGCGGCCTCCTTCTCGGAACGCTGTTTTTTGCCGC CTCGCTCACCCCGACGCTGCTTCCGCGGACCGTTGTGACCCAAGGTGTGCTTTCGGGATTCGCCCTGGCGGCAGGCTATG GCATCGGCGTGTTCGGCCGGTGGCTTTGTGTCTACCTGGAGTTGCCAGCGCCGCGAGGCCTGCGCGCCGCAAAACTGGTC GCCGCCGTCGGATGCTTGCTCGTCGCTTGCATCTTCCTCTGGTGGGCGGCGCAATGGCAGAACTCGATCCGGAAGCTGAT GGGCCTCGACCTTGTTGAAAGCGCGCATCCGCTCAAGGTTGGTCTGCTCGCGCTGGTGACATTCGCTCTCGTCATCGCCC TGGCACGGCTCTTCCAGCTGACGATCCGTTTCGTGTCGACCAGAGTTAGCCGCTTTGCGCCGAGGAGGGTCTCGAACATC GTCGGCGTGATCGTCTCGGTTGCGCTCTTCTGGTCGATCACCAGCGGCGTGCTGTTTCGTGTCGCGCTTCACTTCGCGGA TTCGTTCTACAGGCAATATGACGCGCTGGTCGAACCGGAGACTGCACGGCCAACCGACCCCGACAAGACTGGCAGCAGCG CCTCATTGCTCGATTGGAACGAGTTGGGACGAACAGGGCGCGCGTTCGTTGCCGAAGGGCCGACGGGTGAGGAAATACAC GCTTTCACCAACAAGAAGGCGCTGCAGCCGATCCGTGTCTATGTCGGGCTGCGATCCGCCGATAGCCCGGAAAAAAGAGC GCGGCTCGCGCTGAACGAGCTGATACGGGTCGGCGGCTTCCAGCGTTCGGTGCTGGTCGTCGTGACGCCCACCGGAAGCG GATGGATCGATCCGGCGGCGATGGAGAGTCTGGAATATCTTCAGAACGGCGATGTCGCGAGCGTTGCCGTGCAATACTCC TACCTTGCCAGCTGGCTGTCGCTGCTTGTGGAGCCGGACTATGGAGCCGATACTGCGCAGGCCCTCTTCCGGGATGTCTA CGACTATTGGATCAGGCTGCCCAAGAATAGCCGCCCGCGGCTCTATCTGCATGGCCTCAGCCTGGGTGCGATGAACTCCG AACGATCAACCGACATGTTCGACGTGGTCGGAGATCCGTTTCAGGGCGCGCTGTGGAGCGGACCGCCATACCGAAGCGGC CTTTGGCGTTCGTTTACCCGGGACCGGAGTCCGGGGTCGCCTGCTTGGCTTCCCCGTTTTCGTAACGGATCGATTGTTCG GTTCATGAACCAAGATGGCGTGGCCGCGGATCCAGGCTTTGTCTGGGGGCCGATGCGAATCGTTTATCTCCAATATGCGA GCGACCCGGTGACATTCTTCGACTATCGCGATCTCTACCGCGAGCCGGATTGGATAAAGCCCCCGCGCGGCCCGGACGTC TCGCCTGAACTGCGGTGGTATCCGGTGGTGACTTTCCTGCAGCTCACACTTGACATGGCTATGGCAACGACCGCGCCGAT CGGGCACGGACACGTTTATGCGCCGGGCGATTACGTCGAGGGGTGGATTGAGGTGGCCAATGTTCAAGGATGGTCCCTGC AGCAAATCGCGGAATTGAAACGACATCTCGGTCGCTTGCCCTGA
Upstream 100 bases:
>100_bases TGATTGCGGCCCGGGACGACAGAACAGCTTCGACTTGCGCCGGATCACCGCAGGCAATTACTTCATCTCGACGGTACGCA GCCGTAATCCGGAGGTCTGC
Downstream 100 bases:
>100_bases AACAGGGCAATGTCGTTGGCCATCTGTAAAGCAAGCCTGCGGCACGCGAGGAGCTTCGAGCATTTGAGCCCGTGGCGTGC GCCCCCTTGGCCGGCGGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 547
Protein sequence:
>547_residues MKRHWLFGLWHSLSAGGLLLGTLFFAASLTPTLLPRTVVTQGVLSGFALAAGYGIGVFGRWLCVYLELPAPRGLRAAKLV AAVGCLLVACIFLWWAAQWQNSIRKLMGLDLVESAHPLKVGLLALVTFALVIALARLFQLTIRFVSTRVSRFAPRRVSNI VGVIVSVALFWSITSGVLFRVALHFADSFYRQYDALVEPETARPTDPDKTGSSASLLDWNELGRTGRAFVAEGPTGEEIH AFTNKKALQPIRVYVGLRSADSPEKRARLALNELIRVGGFQRSVLVVVTPTGSGWIDPAAMESLEYLQNGDVASVAVQYS YLASWLSLLVEPDYGADTAQALFRDVYDYWIRLPKNSRPRLYLHGLSLGAMNSERSTDMFDVVGDPFQGALWSGPPYRSG LWRSFTRDRSPGSPAWLPRFRNGSIVRFMNQDGVAADPGFVWGPMRIVYLQYASDPVTFFDYRDLYREPDWIKPPRGPDV SPELRWYPVVTFLQLTLDMAMATTAPIGHGHVYAPGDYVEGWIEVANVQGWSLQQIAELKRHLGRLP
Sequences:
>Translated_547_residues MKRHWLFGLWHSLSAGGLLLGTLFFAASLTPTLLPRTVVTQGVLSGFALAAGYGIGVFGRWLCVYLELPAPRGLRAAKLV AAVGCLLVACIFLWWAAQWQNSIRKLMGLDLVESAHPLKVGLLALVTFALVIALARLFQLTIRFVSTRVSRFAPRRVSNI VGVIVSVALFWSITSGVLFRVALHFADSFYRQYDALVEPETARPTDPDKTGSSASLLDWNELGRTGRAFVAEGPTGEEIH AFTNKKALQPIRVYVGLRSADSPEKRARLALNELIRVGGFQRSVLVVVTPTGSGWIDPAAMESLEYLQNGDVASVAVQYS YLASWLSLLVEPDYGADTAQALFRDVYDYWIRLPKNSRPRLYLHGLSLGAMNSERSTDMFDVVGDPFQGALWSGPPYRSG LWRSFTRDRSPGSPAWLPRFRNGSIVRFMNQDGVAADPGFVWGPMRIVYLQYASDPVTFFDYRDLYREPDWIKPPRGPDV SPELRWYPVVTFLQLTLDMAMATTAPIGHGHVYAPGDYVEGWIEVANVQGWSLQQIAELKRHLGRLP >Mature_547_residues MKRHWLFGLWHSLSAGGLLLGTLFFAASLTPTLLPRTVVTQGVLSGFALAAGYGIGVFGRWLCVYLELPAPRGLRAAKLV AAVGCLLVACIFLWWAAQWQNSIRKLMGLDLVESAHPLKVGLLALVTFALVIALARLFQLTIRFVSTRVSRFAPRRVSNI VGVIVSVALFWSITSGVLFRVALHFADSFYRQYDALVEPETARPTDPDKTGSSASLLDWNELGRTGRAFVAEGPTGEEIH AFTNKKALQPIRVYVGLRSADSPEKRARLALNELIRVGGFQRSVLVVVTPTGSGWIDPAAMESLEYLQNGDVASVAVQYS YLASWLSLLVEPDYGADTAQALFRDVYDYWIRLPKNSRPRLYLHGLSLGAMNSERSTDMFDVVGDPFQGALWSGPPYRSG LWRSFTRDRSPGSPAWLPRFRNGSIVRFMNQDGVAADPGFVWGPMRIVYLQYASDPVTFFDYRDLYREPDWIKPPRGPDV SPELRWYPVVTFLQLTLDMAMATTAPIGHGHVYAPGDYVEGWIEVANVQGWSLQQIAELKRHLGRLP
Specific function: Unknown
COG id: COG4425
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60810; Mature: 60810
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRHWLFGLWHSLSAGGLLLGTLFFAASLTPTLLPRTVVTQGVLSGFALAAGYGIGVFGR CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WLCVYLELPAPRGLRAAKLVAAVGCLLVACIFLWWAAQWQNSIRKLMGLDLVESAHPLKV HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH GLLALVTFALVIALARLFQLTIRFVSTRVSRFAPRRVSNIVGVIVSVALFWSITSGVLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALHFADSFYRQYDALVEPETARPTDPDKTGSSASLLDWNELGRTGRAFVAEGPTGEEIH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCHHH AFTNKKALQPIRVYVGLRSADSPEKRARLALNELIRVGGFQRSVLVVVTPTGSGWIDPAA HHHCCHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH MESLEYLQNGDVASVAVQYSYLASWLSLLVEPDYGADTAQALFRDVYDYWIRLPKNSRPR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCE LYLHGLSLGAMNSERSTDMFDVVGDPFQGALWSGPPYRSGLWRSFTRDRSPGSPAWLPRF EEEEECEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC RNGSIVRFMNQDGVAADPGFVWGPMRIVYLQYASDPVTFFDYRDLYREPDWIKPPRGPDV CCCCEEEEECCCCCCCCCCCEECCEEEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCC SPELRWYPVVTFLQLTLDMAMATTAPIGHGHVYAPGDYVEGWIEVANVQGWSLQQIAELK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH RHLGRLP HHHCCCC >Mature Secondary Structure MKRHWLFGLWHSLSAGGLLLGTLFFAASLTPTLLPRTVVTQGVLSGFALAAGYGIGVFGR CCCCCHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH WLCVYLELPAPRGLRAAKLVAAVGCLLVACIFLWWAAQWQNSIRKLMGLDLVESAHPLKV HHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHH GLLALVTFALVIALARLFQLTIRFVSTRVSRFAPRRVSNIVGVIVSVALFWSITSGVLFR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VALHFADSFYRQYDALVEPETARPTDPDKTGSSASLLDWNELGRTGRAFVAEGPTGEEIH HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEECCCCCCHHH AFTNKKALQPIRVYVGLRSADSPEKRARLALNELIRVGGFQRSVLVVVTPTGSGWIDPAA HHHCCHHCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHH MESLEYLQNGDVASVAVQYSYLASWLSLLVEPDYGADTAQALFRDVYDYWIRLPKNSRPR HHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCCCCE LYLHGLSLGAMNSERSTDMFDVVGDPFQGALWSGPPYRSGLWRSFTRDRSPGSPAWLPRF EEEEECEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC RNGSIVRFMNQDGVAADPGFVWGPMRIVYLQYASDPVTFFDYRDLYREPDWIKPPRGPDV CCCCEEEEECCCCCCCCCCCEECCEEEEEEEECCCCEEEHHHHHHHCCCCCCCCCCCCCC SPELRWYPVVTFLQLTLDMAMATTAPIGHGHVYAPGDYVEGWIEVANVQGWSLQQIAELK CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHCCCCCCCHHHHHHHH RHLGRLP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA