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The map label for this gene is ygeH [C]

Identifier: 13475573

GI number: 13475573

Start: 5473274

End: 5473780

Strand: Reverse

Name: ygeH [C]

Synonym: mll6677

Alternate gene names: 13475573

Gene position: 5473780-5473274 (Counterclockwise)

Preceding gene: 13475574

Following gene: 13475572

Centisome position: 77.8

GC content: 58.97

Gene sequence:

>507_bases
ATGATCTTTGACCGCTTGCCCTCGTCCAGCCCGACAGCGCCCACGCAATTTGATCCCCGGCCCCAACTAAGGGTGAGAGG
CGAAATCGCATTCGGACCGTTTCTTCTGTTTCCGAAACAGTTTCTTCTGTTGGAGGGCGACAAACCGGTGCCGCTCGGAA
GTCGCGCGCTGGGCATCCTGATCGCCTTGCTTGAGCGCCCAGGCGAGCTCGTCAGCAAGCAGGAACTGATGGCCCGCGTT
TGGCCCGATGTCTTTGTCGTGCCTACCAATCTCACCGTCCACATCTCGGCATTGCGCCGCGTTTTGCGCGACGGACGGGA
TGGAAATCGGTTCATCATCAACATCCCCGGGCGTGGCTACCAATTCGTTGCTTCAGTCCATACGCCGCTTCAACGGAAAG
CGTCGCTTGAAACGATGCGCCCAATTGTTCCGGCGCTTGAAGAGCGCCTTCAGATTCAAGCGCCTTCAGAGTACGGAGCG
TACGGCGTTCCCACTGCGGGGCCTTGA

Upstream 100 bases:

>100_bases
ATCCTATAACGGGCACTTCTCGCGGCGTCGGAGTAAATGCTGAGGCATAAAACGGGTCCCTAACGCAAGCGAGGTCACCA
TGAGCGCATCAGGATTGACT

Downstream 100 bases:

>100_bases
GACTCTGGAGAGGGGCTGATGCGTACCCACAGCGATCCGAGACGCCGAAATGGATTCGGCCGGACGACTGGGCGCCTTGG
ACCCAGTTCAACCTGAGGGG

Product: transcriptional activator

Products: NA

Alternate protein names: Transcriptional Regulator Winged Helix Family; Winged Helix Family Transcriptional Regulator; Transcriptional Regulator Domain-Containing Protein; Adenylate Cyclase; Transcriptional Regulator Domain Protein; LuxR Family Transcriptional Regulator; Transcriptional Regulator Winged Helix Family Protein; Transcriptional Activator; Transcriptional Regulatory Protein; Transcriptional Regulator CadC; Transcriptional Regulator Protein; Adenylate Cyclase/Transcriptional Regulator

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MIFDRLPSSSPTAPTQFDPRPQLRVRGEIAFGPFLLFPKQFLLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARV
WPDVFVVPTNLTVHISALRRVLRDGRDGNRFIINIPGRGYQFVASVHTPLQRKASLETMRPIVPALEERLQIQAPSEYGA
YGVPTAGP

Sequences:

>Translated_168_residues
MIFDRLPSSSPTAPTQFDPRPQLRVRGEIAFGPFLLFPKQFLLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARV
WPDVFVVPTNLTVHISALRRVLRDGRDGNRFIINIPGRGYQFVASVHTPLQRKASLETMRPIVPALEERLQIQAPSEYGA
YGVPTAGP
>Mature_168_residues
MIFDRLPSSSPTAPTQFDPRPQLRVRGEIAFGPFLLFPKQFLLLEGDKPVPLGSRALGILIALLERPGELVSKQELMARV
WPDVFVVPTNLTVHISALRRVLRDGRDGNRFIINIPGRGYQFVASVHTPLQRKASLETMRPIVPALEERLQIQAPSEYGA
YGVPTAGP

Specific function: Unknown

COG id: COG3710

COG function: function code K; DNA-binding winged-HTH domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18646; Mature: 18646

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFDRLPSSSPTAPTQFDPRPQLRVRGEIAFGPFLLFPKQFLLLEGDKPVPLGSRALGIL
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCEEEEEECCCCCCCCHHHHHHH
IALLERPGELVSKQELMARVWPDVFVVPTNLTVHISALRRVLRDGRDGNRFIINIPGRGY
HHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCE
QFVASVHTPLQRKASLETMRPIVPALEERLQIQAPSEYGAYGVPTAGP
EEEEEHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIFDRLPSSSPTAPTQFDPRPQLRVRGEIAFGPFLLFPKQFLLLEGDKPVPLGSRALGIL
CCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCEEEEEECCCCCCCCHHHHHHH
IALLERPGELVSKQELMARVWPDVFVVPTNLTVHISALRRVLRDGRDGNRFIINIPGRGY
HHHHHCCHHHHHHHHHHHHHCCCEEEECCCCEEEHHHHHHHHHCCCCCCEEEEECCCCCE
QFVASVHTPLQRKASLETMRPIVPALEERLQIQAPSEYGAYGVPTAGP
EEEEEHHCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA