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The map label for this gene is 13475572

Identifier: 13475572

GI number: 13475572

Start: 5470959

End: 5472425

Strand: Reverse

Name: 13475572

Synonym: mll6676

Alternate gene names: NA

Gene position: 5472425-5470959 (Counterclockwise)

Preceding gene: 13475573

Following gene: 13475565

Centisome position: 77.78

GC content: 64.08

Gene sequence:

>1467_bases
GTGAAGTTGTTCATTGCTGGATTGGACACCGAAACCAACACGTTTTCTCCGATACGCACCGGCCATGAGGCCTTTGTCGA
GGGCCAGGTTGCGCATGGCGACGCCACGACGAAGCCGCTGAATTGCTGCTCTTCACAACTCTTTGTCTGGCACAATGCCG
CTCGCGAGCGCGGCTGGACTGTTGTCGAGAGCCTATGCGCAGTGGCGGAGCCCGGCGGCACGACGACACGCTCCGTCTAC
GAAGATTTCCGTAGCGAAATCCTGCGCGACCTCAAAGCTGCCATGCCGGTGGACGCCGTGCTTCTCGCCTTGCACGGCGC
TTGCGTTGCCGAGGGTTACGACGATGTCGAAGGCGATCTGCTAGCCCATGTCCGTGCGCTGGTCGGACCCGATATCCCCA
TTGGCGCGGAGCTCGATCTGCACTGCCATTTGACGCGGCGCATGATGGAAAGCGCCACCATGATCGTGGCCTATATGGAA
TATCCCCACACCGACATCGAGGAGCGCGCCGGCCATCTGTTCGAGCTGATGGTCAAGGTGCTGGCCGGAGAGATCCGCCC
GGTGATGGCGCTGTTCGATTGCCGCATGATCGGCACCTTCAGGCCCCATCAACAACCCTTGCGCGGGCTGGTCGACCGCA
TGAAGGCGAGCCAAGGCCGCGACGGCATCCTGTCGGTGTCGTTCGGCCACGGTTTCCCCTGGGGCGATGTCGCCGATGTC
GGCGCCAAGATGCTGGTCGTGGCCGATCGCGACGCAGGCAAGGCGCACCAAGTCGCGTCGGCCTTTGGCCGCGAGATTTT
CGCGCTGCGCAATGCGCTCGAACCCCATCATCTCACCATCGACGACGCGCTTGATCGCGCGATGGCGACCGACGGCGGCC
CGGTCGTGCTGGCTGACGTATCGGACAATGCAGGCGGCGGCGCTCCAGGCGACTCCACCTTCATCATTCGCCGGGTGATC
GAACGCGGCATACGCGACGTCGCCAGCTGCCTGTACTGGGATCCCATTGCGGTGCGGCTTTGCCAGGCCGCCGGCGAAGG
CGCGACGCTGCCGCTTCGGATCGGCGGCAAGATCGGGGCGGCATCCGGCGAGCCGCTCGACCTCAACGTCACCGTGCGCC
GCATCGCTTCCGGCATCACCCAGCGCTTTGGCGCGGTGCCGCTGCCGATCGGCGACGCCGCCTGGGTCAGCGCCGACGGC
ATCGATCTGGTGATCAACAGCGTGCGCACGCAAACCTTCCATCCCGAATGCATGACCGCGCTTGGCCTTGATCCCGCCAC
TCGCAAGATCGTGGTCGTCAAGTCGAGCAATCATTTCCGGGCCGGTTTCGAGCCGATCGCCAAGGACATTCTCTATGTGG
CCGCGCCCGGAGCGCTGCAGCCCAATTTCCGCGATCTGGCATACACCAAGCTGCGGCAGCCATACTGGCCGAAGGTCGCG
GAGCCATTCGCGGAATTGGCGCTATAA

Upstream 100 bases:

>100_bases
TGCCCATATTTTCAAGGTCTGTCGGCAATTGACTTTCCGAACATAAACTCTTTTATATTGATCATAAAAGTTGTTTCATG
TCGGCGCCAGAGGTGGTTTC

Downstream 100 bases:

>100_bases
TCAACGCCAGGCTTCAGCGTTTCGCGGCGCGCGAACAGGGTAGGTCGACCGCCCTCCGCGCCCGCCCACCATCGGCTTTC
AGATATCACCCGCCTGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: MlrC Domain-Containing Protein; MlrC Domain Protein; MlrC Family; Microcystin LR Degradation Protein MlrC; MlrC-Like; MlrC C-Terminus Family; MlrC Family Protein; Peptidase; MlrC C-Terminal Domain Family Protein; MlrC-Like Protein; Cytoplasmic Protein; Microcystin Lr Degradation Protein Mlrc-Like Protein; MlrC C-Terminus Family Protein; LOW QUALITY PROTEIN MlrC C-Terminus Superfamily Protein; Microcystin Lr Degradation Domain; MlrC C-Terminus Superfamily Protein

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MKLFIAGLDTETNTFSPIRTGHEAFVEGQVAHGDATTKPLNCCSSQLFVWHNAARERGWTVVESLCAVAEPGGTTTRSVY
EDFRSEILRDLKAAMPVDAVLLALHGACVAEGYDDVEGDLLAHVRALVGPDIPIGAELDLHCHLTRRMMESATMIVAYME
YPHTDIEERAGHLFELMVKVLAGEIRPVMALFDCRMIGTFRPHQQPLRGLVDRMKASQGRDGILSVSFGHGFPWGDVADV
GAKMLVVADRDAGKAHQVASAFGREIFALRNALEPHHLTIDDALDRAMATDGGPVVLADVSDNAGGGAPGDSTFIIRRVI
ERGIRDVASCLYWDPIAVRLCQAAGEGATLPLRIGGKIGAASGEPLDLNVTVRRIASGITQRFGAVPLPIGDAAWVSADG
IDLVINSVRTQTFHPECMTALGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPNFRDLAYTKLRQPYWPKVA
EPFAELAL

Sequences:

>Translated_488_residues
MKLFIAGLDTETNTFSPIRTGHEAFVEGQVAHGDATTKPLNCCSSQLFVWHNAARERGWTVVESLCAVAEPGGTTTRSVY
EDFRSEILRDLKAAMPVDAVLLALHGACVAEGYDDVEGDLLAHVRALVGPDIPIGAELDLHCHLTRRMMESATMIVAYME
YPHTDIEERAGHLFELMVKVLAGEIRPVMALFDCRMIGTFRPHQQPLRGLVDRMKASQGRDGILSVSFGHGFPWGDVADV
GAKMLVVADRDAGKAHQVASAFGREIFALRNALEPHHLTIDDALDRAMATDGGPVVLADVSDNAGGGAPGDSTFIIRRVI
ERGIRDVASCLYWDPIAVRLCQAAGEGATLPLRIGGKIGAASGEPLDLNVTVRRIASGITQRFGAVPLPIGDAAWVSADG
IDLVINSVRTQTFHPECMTALGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPNFRDLAYTKLRQPYWPKVA
EPFAELAL
>Mature_488_residues
MKLFIAGLDTETNTFSPIRTGHEAFVEGQVAHGDATTKPLNCCSSQLFVWHNAARERGWTVVESLCAVAEPGGTTTRSVY
EDFRSEILRDLKAAMPVDAVLLALHGACVAEGYDDVEGDLLAHVRALVGPDIPIGAELDLHCHLTRRMMESATMIVAYME
YPHTDIEERAGHLFELMVKVLAGEIRPVMALFDCRMIGTFRPHQQPLRGLVDRMKASQGRDGILSVSFGHGFPWGDVADV
GAKMLVVADRDAGKAHQVASAFGREIFALRNALEPHHLTIDDALDRAMATDGGPVVLADVSDNAGGGAPGDSTFIIRRVI
ERGIRDVASCLYWDPIAVRLCQAAGEGATLPLRIGGKIGAASGEPLDLNVTVRRIASGITQRFGAVPLPIGDAAWVSADG
IDLVINSVRTQTFHPECMTALGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPNFRDLAYTKLRQPYWPKVA
EPFAELAL

Specific function: Unknown

COG id: COG5476

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52698; Mature: 52698

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIAGLDTETNTFSPIRTGHEAFVEGQVAHGDATTKPLNCCSSQLFVWHNAARERGWT
CEEEEEECCCCCCCCCCHHCCCHHHHCCEEECCCCCCCHHHHHCCCEEEEEHHHHHCCHH
VVESLCAVAEPGGTTTRSVYEDFRSEILRDLKAAMPVDAVLLALHGACVAEGYDDVEGDL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
LAHVRALVGPDIPIGAELDLHCHLTRRMMESATMIVAYMEYPHTDIEERAGHLFELMVKV
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
LAGEIRPVMALFDCRMIGTFRPHQQPLRGLVDRMKASQGRDGILSVSFGHGFPWGDVADV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHC
GAKMLVVADRDAGKAHQVASAFGREIFALRNALEPHHLTIDDALDRAMATDGGPVVLADV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEEC
SDNAGGGAPGDSTFIIRRVIERGIRDVASCLYWDPIAVRLCQAAGEGATLPLRIGGKIGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCEEEC
ASGEPLDLNVTVRRIASGITQRFGAVPLPIGDAAWVSADGIDLVINSVRTQTFHPECMTA
CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
LGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPNFRDLAYTKLRQPYWPKVA
HCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHH
EPFAELAL
HHHHHHCC
>Mature Secondary Structure
MKLFIAGLDTETNTFSPIRTGHEAFVEGQVAHGDATTKPLNCCSSQLFVWHNAARERGWT
CEEEEEECCCCCCCCCCHHCCCHHHHCCEEECCCCCCCHHHHHCCCEEEEEHHHHHCCHH
VVESLCAVAEPGGTTTRSVYEDFRSEILRDLKAAMPVDAVLLALHGACVAEGYDDVEGDL
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHH
LAHVRALVGPDIPIGAELDLHCHLTRRMMESATMIVAYMEYPHTDIEERAGHLFELMVKV
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHH
LAGEIRPVMALFDCRMIGTFRPHQQPLRGLVDRMKASQGRDGILSVSFGHGFPWGDVADV
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHC
GAKMLVVADRDAGKAHQVASAFGREIFALRNALEPHHLTIDDALDRAMATDGGPVVLADV
CCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCCEEEEEC
SDNAGGGAPGDSTFIIRRVIERGIRDVASCLYWDPIAVRLCQAAGEGATLPLRIGGKIGA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCEEEC
ASGEPLDLNVTVRRIASGITQRFGAVPLPIGDAAWVSADGIDLVINSVRTQTFHPECMTA
CCCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHH
LGLDPATRKIVVVKSSNHFRAGFEPIAKDILYVAAPGALQPNFRDLAYTKLRQPYWPKVA
HCCCCCCCEEEEEECCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHH
EPFAELAL
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA