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The map label for this gene is dppA [H]

Identifier: 13475561

GI number: 13475561

Start: 5458145

End: 5458942

Strand: Reverse

Name: dppA [H]

Synonym: mll6661

Alternate gene names: 13475561

Gene position: 5458942-5458145 (Counterclockwise)

Preceding gene: 13475562

Following gene: 13475560

Centisome position: 77.59

GC content: 62.78

Gene sequence:

>798_bases
ATGAAGGTATTCATCAGCGCCGACATCGAAGGCACCGCCGGCATCACCAACTGGGACGAAGCCAAGAAGGGAAATCCCGA
CTACGCCGAGTTCCGCGAGTACATGACCGACGAATTGGTCGCGGCCTGCGAGGGCGCCAGGGCGGCGGGCGCCACCGAAG
TGGTGGTGAAGGACGCGCACTCCACGGCGCGCAACCTCATTCTGTCGAAACTGCCAGACTATGTCCGCATCGTGCGCGGC
TGGAGCGGCCACCCTGACATGATGATGTTCGGCATCGATATCAGCTTCGCCGCAGCGCTTTACACCGGCTACCACAACAA
GGCGGGAACCGACACCAACCCGTTGGCGCATACCTTGACCGGCACGGTATCGCGGTTGCTGATCAATGGCGAGGTCGCCT
CGGAATATACGCTGAACGCGCTCTGCGCGGCACGCTATCGCGTGCCCTCGGCATTCCTCAGCGGCGACGCCGGCATGTGC
GCGGATGCCAAGGTTCTGGTGCCGGCCATCGGTACGGTAGCGACAAGCGAAGGATTTGGCCCTGCGACCTCGTCACTGAC
GCCCGGAGCCGCCGTCAAGGCGATCCGCGACGGCGTTGAAGCGGCATTGTCACGCGACCTGTCAGTTTGCCTGCCCCGGC
TCGCCGACAGTTTCGAACTGGTCGTCGAATACACCACTCCGGTCGAAGCCTATGGTGCCAGCTGGTATCCGGGTGTCGAG
CACGTTGCGGCGCGCACGCTGCGCTTCAAGGCTGCGGATTTCTTCGATATTCAGCGCGCGGTGCGTTTTATCGTCTAG

Upstream 100 bases:

>100_bases
CCGATGATGCGGCTGGCGATGTTTTCCGAGCATTCTCCCGAGCAGATCAACCGGCTGCTGTCGTCGATGGCCGAGCTACT
TTGAAACAGGAAGACAGATC

Downstream 100 bases:

>100_bases
GGATAGGGAAAGACACCTTGCGCACCAGCCGTCACGCGCTGCAACGCTGATACATTTCGATGCGCGTTGAAGTCGCCGGT
CGGACAGCCTGCAGAGCAGT

Product: dipeptide ABC transporter, transport associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAHSTARNLILSKLPDYVRIVRG
WSGHPDMMMFGIDISFAAALYTGYHNKAGTDTNPLAHTLTGTVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMC
ADAKVLVPAIGTVATSEGFGPATSSLTPGAAVKAIRDGVEAALSRDLSVCLPRLADSFELVVEYTTPVEAYGASWYPGVE
HVAARTLRFKAADFFDIQRAVRFIV

Sequences:

>Translated_265_residues
MKVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAHSTARNLILSKLPDYVRIVRG
WSGHPDMMMFGIDISFAAALYTGYHNKAGTDTNPLAHTLTGTVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMC
ADAKVLVPAIGTVATSEGFGPATSSLTPGAAVKAIRDGVEAALSRDLSVCLPRLADSFELVVEYTTPVEAYGASWYPGVE
HVAARTLRFKAADFFDIQRAVRFIV
>Mature_265_residues
MKVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAHSTARNLILSKLPDYVRIVRG
WSGHPDMMMFGIDISFAAALYTGYHNKAGTDTNPLAHTLTGTVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMC
ADAKVLVPAIGTVATSEGFGPATSSLTPGAAVKAIRDGVEAALSRDLSVCLPRLADSFELVVEYTTPVEAYGASWYPGVE
HVAARTLRFKAADFFDIQRAVRFIV

Specific function: Hydrolyzes N-terminal residues in D-amino acid containing peptides. Among the tested substrates, the highest activities are with D-Ala-D-Ala and D-Ala-Gly-Gly. The physiological role is not clear [H]

COG id: COG2362

COG function: function code E; D-aminopeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M55 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007035 [H]

Pfam domain/function: PF04951 Peptidase_M55 [H]

EC number: NA

Molecular weight: Translated: 28310; Mature: 28310

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAH
CEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECHH
STARNLILSKLPDYVRIVRGWSGHPDMMMFGIDISFAAALYTGYHNKAGTDTNPLAHTLT
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHH
GTVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMCADAKVLVPAIGTVATSEGFG
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCC
PATSSLTPGAAVKAIRDGVEAALSRDLSVCLPRLADSFELVVEYTTPVEAYGASWYPGVE
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCHHHCCCCCCCCHH
HVAARTLRFKAADFFDIQRAVRFIV
HHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKVFISADIEGTAGITNWDEAKKGNPDYAEFREYMTDELVAACEGARAAGATEVVVKDAH
CEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECHH
STARNLILSKLPDYVRIVRGWSGHPDMMMFGIDISFAAALYTGYHNKAGTDTNPLAHTLT
HHHHHHHHHHCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCCCCCCHHHHHHH
GTVSRLLINGEVASEYTLNALCAARYRVPSAFLSGDAGMCADAKVLVPAIGTVATSEGFG
HHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEHHHHHHHHHCCCCCC
PATSSLTPGAAVKAIRDGVEAALSRDLSVCLPRLADSFELVVEYTTPVEAYGASWYPGVE
CCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEECCCHHHCCCCCCCCHH
HVAARTLRFKAADFFDIQRAVRFIV
HHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]