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The map label for this gene is yxjL [H]

Identifier: 13475464

GI number: 13475464

Start: 5352156

End: 5352827

Strand: Direct

Name: yxjL [H]

Synonym: mlr6543

Alternate gene names: 13475464

Gene position: 5352156-5352827 (Clockwise)

Preceding gene: 13475463

Following gene: 13475465

Centisome position: 76.07

GC content: 60.27

Gene sequence:

>672_bases
ATGCGGCTTGTTGTTGTTACTCCGATCCGTTTGTTTGGGGACGCGTTGACCGCGTGCTTTCTTCCTCGAACCGAAGTCTC
GCTGCAAGCAACCGTTTCCGACCTGACACATCTGCGTATCCTCCTTCGTGATGTGCATGCCGAAATTGTGCTGATCGATG
TGACGCAGGGCATAGCGCTTGACGAAGTTCGCTCGATTGCATCGCAGTTCCCGGGGATTGCACTAGTCGCGCTCGGCCTC
CAAGAGCAGCGACAGGACGTCATTCGTTGCGGGCGGGCCGGGTTCAGTGGCTATGTCGGCCGAGACGCGTCCGTGGAGGA
TTTGTGCTGCGCGCTTGCGAACGCGCGCTGCGGGAAGCTCTCGTGCAGCGCCGAGATTTCCGGCGGACTGTTGCGCGCAC
TGTTTGAAATGGAGCGGAACACGCGGCCGGCGGAATCGACCAAGGCGCTTACGCAACGCGAGGGAGAGGTGCTGCAATTG
ATCGGCAATGGTCTATCCAACAAGGAGATTGCGCTCGACCTCAGCGTCAGCGTCGCCACTGTCAAGCACCATGTCCATAA
CATTCTCCAGAAGCTAAAGCTGCCTCGGCGCACGCAAGCGATGCGCCGCGTGCGCGAGGCGCCATGGATAGCTGCTTCGC
CGCCGCTGGATCGGTACGACGAAGCCGACTGA

Upstream 100 bases:

>100_bases
TACATTAGAAGTTCTTAATGCCTACTGCCGTTCAGACGTAAGTCCATTCCGGGCTGCCTCGCAGGTGTTGATCACTGCAT
AAGGGAGCCGTGGGGGTTTT

Downstream 100 bases:

>100_bases
CTCGCCCCCTGCTCCTCCTTTTCGCACGCATGCGCATGTTTAGCCGGTCGACGTCCGGCCGCATGTCCTCGTCCGTGAAG
GATGGATCCTTGGATTGATA

Product: two-component regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MRLVVVTPIRLFGDALTACFLPRTEVSLQATVSDLTHLRILLRDVHAEIVLIDVTQGIALDEVRSIASQFPGIALVALGL
QEQRQDVIRCGRAGFSGYVGRDASVEDLCCALANARCGKLSCSAEISGGLLRALFEMERNTRPAESTKALTQREGEVLQL
IGNGLSNKEIALDLSVSVATVKHHVHNILQKLKLPRRTQAMRRVREAPWIAASPPLDRYDEAD

Sequences:

>Translated_223_residues
MRLVVVTPIRLFGDALTACFLPRTEVSLQATVSDLTHLRILLRDVHAEIVLIDVTQGIALDEVRSIASQFPGIALVALGL
QEQRQDVIRCGRAGFSGYVGRDASVEDLCCALANARCGKLSCSAEISGGLLRALFEMERNTRPAESTKALTQREGEVLQL
IGNGLSNKEIALDLSVSVATVKHHVHNILQKLKLPRRTQAMRRVREAPWIAASPPLDRYDEAD
>Mature_223_residues
MRLVVVTPIRLFGDALTACFLPRTEVSLQATVSDLTHLRILLRDVHAEIVLIDVTQGIALDEVRSIASQFPGIALVALGL
QEQRQDVIRCGRAGFSGYVGRDASVEDLCCALANARCGKLSCSAEISGGLLRALFEMERNTRPAESTKALTQREGEVLQL
IGNGLSNKEIALDLSVSVATVKHHVHNILQKLKLPRRTQAMRRVREAPWIAASPPLDRYDEAD

Specific function: Probable member of the two-component regulatory system yxjM/yxjL [H]

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789
- InterPro:   IPR011990
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 24417; Mature: 24417

Theoretical pI: Translated: 7.83; Mature: 7.83

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVVVTPIRLFGDALTACFLPRTEVSLQATVSDLTHLRILLRDVHAEIVLIDVTQGIAL
CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
DEVRSIASQFPGIALVALGLQEQRQDVIRCGRAGFSGYVGRDASVEDLCCALANARCGKL
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
SCSAEISGGLLRALFEMERNTRPAESTKALTQREGEVLQLIGNGLSNKEIALDLSVSVAT
ECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEHHHHH
VKHHVHNILQKLKLPRRTQAMRRVREAPWIAASPPLDRYDEAD
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLVVVTPIRLFGDALTACFLPRTEVSLQATVSDLTHLRILLRDVHAEIVLIDVTQGIAL
CEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCH
DEVRSIASQFPGIALVALGLQEQRQDVIRCGRAGFSGYVGRDASVEDLCCALANARCGKL
HHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCE
SCSAEISGGLLRALFEMERNTRPAESTKALTQREGEVLQLIGNGLSNKEIALDLSVSVAT
ECCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCCCCCCEEEEEEEHHHHH
VKHHVHNILQKLKLPRRTQAMRRVREAPWIAASPPLDRYDEAD
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8978088; 8969509; 9384377 [H]