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The map label for this gene is 13475463

Identifier: 13475463

GI number: 13475463

Start: 5350228

End: 5350686

Strand: Direct

Name: 13475463

Synonym: mlr6541

Alternate gene names: NA

Gene position: 5350228-5350686 (Clockwise)

Preceding gene: 13475461

Following gene: 13475464

Centisome position: 76.04

GC content: 60.13

Gene sequence:

>459_bases
ATGTCCAAGACCAAGACCGCCGACACGATCGAAAACGTTGAATTCCCGAGCTTCGACGCTTCCAAGGCCACTGACCAGAT
TCGCGCTTTCGCCGAAAAGGGCGTTGAGCAGTCGAAAGAGGCCTATGCCAAGCTCAAGACCGGCGCCGAGGAGACCCAGA
AGGCTCTGGAGTCGACCTACGAGACCGCCAAGACTGTTTCCAGCGACCTGTCGCTCAAGACCATCGCGGCGCTGCGCGCC
AATGCCGAAGCCGGCTTCTCGCATCTCGAAGCCCTGATCGGCGCCAAGTCGCTGTCGGAAGTCGTCGAGCTGCAGACCGC
TTTCCTGCGCAAGCGCGTCGAGTTGACCGTCGAGCAGGCCAAGGACTTCCAGGCTGTTGCCTCCAAGGCGGCTGAAGAAG
TCTCCAAGCCGATCAAGACCGCCTTCGAGAAGGCGATCAAGGACATCAAGGCTGCCTAA

Upstream 100 bases:

>100_bases
AACAAAGATATTGCAATGCACAAAATTTGCCTTTATATTGCCATCATAACTGAACGAGACGGCTTTCCGTCAAAGCCGCT
GCCGCTGAAAAGGATGGAAA

Downstream 100 bases:

>100_bases
CATTTGCGCATGATCTGAGGATGCAACAAAAGGTCGCATTTTCTTAAAAACCGTCAGGCGTATGATGGCAGCCATCAAGG
AATACCCGGCGAGTGGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MSKTKTADTIENVEFPSFDASKATDQIRAFAEKGVEQSKEAYAKLKTGAEETQKALESTYETAKTVSSDLSLKTIAALRA
NAEAGFSHLEALIGAKSLSEVVELQTAFLRKRVELTVEQAKDFQAVASKAAEEVSKPIKTAFEKAIKDIKAA

Sequences:

>Translated_152_residues
MSKTKTADTIENVEFPSFDASKATDQIRAFAEKGVEQSKEAYAKLKTGAEETQKALESTYETAKTVSSDLSLKTIAALRA
NAEAGFSHLEALIGAKSLSEVVELQTAFLRKRVELTVEQAKDFQAVASKAAEEVSKPIKTAFEKAIKDIKAA
>Mature_151_residues
SKTKTADTIENVEFPSFDASKATDQIRAFAEKGVEQSKEAYAKLKTGAEETQKALESTYETAKTVSSDLSLKTIAALRAN
AEAGFSHLEALIGAKSLSEVVELQTAFLRKRVELTVEQAKDFQAVASKAAEEVSKPIKTAFEKAIKDIKAA

Specific function: Unknown

COG id: COG5490

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018968 [H]

Pfam domain/function: PF09361 Phasin_2 [H]

EC number: NA

Molecular weight: Translated: 16432; Mature: 16300

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTKTADTIENVEFPSFDASKATDQIRAFAEKGVEQSKEAYAKLKTGAEETQKALESTY
CCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ETAKTVSSDLSLKTIAALRANAEAGFSHLEALIGAKSLSEVVELQTAFLRKRVELTVEQA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFQAVASKAAEEVSKPIKTAFEKAIKDIKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKTKTADTIENVEFPSFDASKATDQIRAFAEKGVEQSKEAYAKLKTGAEETQKALESTY
CCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
ETAKTVSSDLSLKTIAALRANAEAGFSHLEALIGAKSLSEVVELQTAFLRKRVELTVEQA
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFQAVASKAAEEVSKPIKTAFEKAIKDIKAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]