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The map label for this gene is 13475424

Identifier: 13475424

GI number: 13475424

Start: 5298153

End: 5298683

Strand: Direct

Name: 13475424

Synonym: mlr6488

Alternate gene names: NA

Gene position: 5298153-5298683 (Clockwise)

Preceding gene: 13475423

Following gene: 13475426

Centisome position: 75.3

GC content: 58.57

Gene sequence:

>531_bases
ATGTTGCTCGTCGAAGTGCTGCTGCTGAAGGCGCTCGCCATACCCCTGCTCGCAAGGATTGCGTGGCTGGACTTCACGAC
CCAGAAGATAGCCAATCGCGACGCTCTGCTGCTGCTCTGCCTGGGGGCGGGATCGCTGCTGCTTTTGTCGCTTCAGTCCG
GATCGTGGTGGGACATGGGGCTGAGCGCCATCGCCGCCCTTGTGTTGTTCGTGGGGCTCTTTCCGTTCTGGGTTCTGCGA
AAGGTCGGCGCAGGCGATGTCAAGCTGATGGCAGTCGTGCCGTTTCTGGTCGGCGGAAATGATCTGGTCGGGTTTTCCAT
CTTGCTGCTGCTGTTCGCCCTGGCAACGGCCGTGGTTGTGAAGAATCCATTCTTGCTTCCACAAGGCGCCTTCCGCGTCT
ACGTGCAACACCTTGATCGCAAAGGTGTCGTCCCGTTTGGCGTGCCTATCTCTGTGGCGTCGATTTGCATGATCGCCTTG
CAGGTCGGATACGGCTTTATGGTTCCCGGCTCTCTATCGATATCGATGTGA

Upstream 100 bases:

>100_bases
ACGAGTTTCCTGAAGGCCTATGAGCTGGCGCCCAACGATCCGACGGTAGCCAACAATCTGAAGCTGCTGTCGTCGAGCGT
GCAGAACATCGAGCGCTAGC

Downstream 100 bases:

>100_bases
ACAATTGACGGGCGCTGGGCTACCTGCGCGCTACTTCTTCGGGCGTCGGCTTGACGACGGCATCCCCTGTATTCCGGCCC
TGTTGAGTGCCGCGCACGAA

Product: type IV prepilin peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLLVEVLLLKALAIPLLARIAWLDFTTQKIANRDALLLLCLGAGSLLLLSLQSGSWWDMGLSAIAALVLFVGLFPFWVLR
KVGAGDVKLMAVVPFLVGGNDLVGFSILLLLFALATAVVVKNPFLLPQGAFRVYVQHLDRKGVVPFGVPISVASICMIAL
QVGYGFMVPGSLSISM

Sequences:

>Translated_176_residues
MLLVEVLLLKALAIPLLARIAWLDFTTQKIANRDALLLLCLGAGSLLLLSLQSGSWWDMGLSAIAALVLFVGLFPFWVLR
KVGAGDVKLMAVVPFLVGGNDLVGFSILLLLFALATAVVVKNPFLLPQGAFRVYVQHLDRKGVVPFGVPISVASICMIAL
QVGYGFMVPGSLSISM
>Mature_176_residues
MLLVEVLLLKALAIPLLARIAWLDFTTQKIANRDALLLLCLGAGSLLLLSLQSGSWWDMGLSAIAALVLFVGLFPFWVLR
KVGAGDVKLMAVVPFLVGGNDLVGFSILLLLFALATAVVVKNPFLLPQGAFRVYVQHLDRKGVVPFGVPISVASICMIAL
QVGYGFMVPGSLSISM

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18808; Mature: 18808

Theoretical pI: Translated: 9.77; Mature: 9.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLVEVLLLKALAIPLLARIAWLDFTTQKIANRDALLLLCLGAGSLLLLSLQSGSWWDMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHH
LSAIAALVLFVGLFPFWVLRKVGAGDVKLMAVVPFLVGGNDLVGFSILLLLFALATAVVV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNPFLLPQGAFRVYVQHLDRKGVVPFGVPISVASICMIALQVGYGFMVPGSLSISM
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEECC
>Mature Secondary Structure
MLLVEVLLLKALAIPLLARIAWLDFTTQKIANRDALLLLCLGAGSLLLLSLQSGSWWDMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCCHHHH
LSAIAALVLFVGLFPFWVLRKVGAGDVKLMAVVPFLVGGNDLVGFSILLLLFALATAVVV
HHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
KNPFLLPQGAFRVYVQHLDRKGVVPFGVPISVASICMIALQVGYGFMVPGSLSISM
CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA