| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475411
Identifier: 13475411
GI number: 13475411
Start: 5285047
End: 5285619
Strand: Reverse
Name: 13475411
Synonym: mll6472
Alternate gene names: NA
Gene position: 5285619-5285047 (Counterclockwise)
Preceding gene: 13475412
Following gene: 13475409
Centisome position: 75.12
GC content: 63.87
Gene sequence:
>573_bases ATGACGACGATCAGCGACCCGCATGTACCGACTGTCTCGGCCGAGCCGATTGAACCGCAACTGCTCGGCAGGGATGCGAG CCGGTCGCGGCTGGCCGTCTTCGTCGGCGTCGGGCTGACGCTGTTTGCGGTGCTGAACGCCACCGCCGCCATCTACCTTT ATCGAGGCATCAACGACCTGCGCACCGTGGAGGGACGTCTTGAGGAACTCGGTGCGTTCGAGCAGCGGATCGTTGCCCGG CTCGACACCGTCAACAACGGTTTTCAAAGCCGGTTTGAAAAGCTGGACAGCCAACTGCAGGGCAGGTTCAACGAAATCAA CGGCAGCATAGCCCGGTTAGAGCAAAACCCCTCGGCACGCGACGACAGCGGCATCAGCGCGGCGGAACCCGTCGTCGTCA CCAGCACCGTGGCGGACGCGTCTTCCGGCAACAGCGATGTCGCGGCCGAACCCGCGGCTGCAGAGACGCCACGGCCAATC AAGCGCAGGAGTGCCGCGCCCCCTGGGCCGAACCCGGCCTACCAGCGAACGGAGACGCCGGACGGCAAGGTCTATTATCG CAAGATCAATTGA
Upstream 100 bases:
>100_bases GCGTGGGATTCGATGGCACATCGGGCTGCTTTCGCCTTACCAACACGGATGTGATCGATCTTTTCAAGCGCGTGCCAGTT GGCACCAAGGTGGTGGTTCA
Downstream 100 bases:
>100_bases GGCATGTCGCGTTCCGGTGAAGCCCGGTGCGCCCGACTAAAGATCCCGTCCCAAAGTCGTGAGGCGCAGGGCCAGAGACT CTGTGCGCAGTCGCGTCTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MTTISDPHVPTVSAEPIEPQLLGRDASRSRLAVFVGVGLTLFAVLNATAAIYLYRGINDLRTVEGRLEELGAFEQRIVAR LDTVNNGFQSRFEKLDSQLQGRFNEINGSIARLEQNPSARDDSGISAAEPVVVTSTVADASSGNSDVAAEPAAAETPRPI KRRSAAPPGPNPAYQRTETPDGKVYYRKIN
Sequences:
>Translated_190_residues MTTISDPHVPTVSAEPIEPQLLGRDASRSRLAVFVGVGLTLFAVLNATAAIYLYRGINDLRTVEGRLEELGAFEQRIVAR LDTVNNGFQSRFEKLDSQLQGRFNEINGSIARLEQNPSARDDSGISAAEPVVVTSTVADASSGNSDVAAEPAAAETPRPI KRRSAAPPGPNPAYQRTETPDGKVYYRKIN >Mature_189_residues TTISDPHVPTVSAEPIEPQLLGRDASRSRLAVFVGVGLTLFAVLNATAAIYLYRGINDLRTVEGRLEELGAFEQRIVARL DTVNNGFQSRFEKLDSQLQGRFNEINGSIARLEQNPSARDDSGISAAEPVVVTSTVADASSGNSDVAAEPAAAETPRPIK RRSAAPPGPNPAYQRTETPDGKVYYRKIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20479; Mature: 20348
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTISDPHVPTVSAEPIEPQLLGRDASRSRLAVFVGVGLTLFAVLNATAAIYLYRGINDL CCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHH RTVEGRLEELGAFEQRIVARLDTVNNGFQSRFEKLDSQLQGRFNEINGSIARLEQNPSAR HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCC DDSGISAAEPVVVTSTVADASSGNSDVAAEPAAAETPRPIKRRSAAPPGPNPAYQRTETP CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC DGKVYYRKIN CCCEEEEECC >Mature Secondary Structure TTISDPHVPTVSAEPIEPQLLGRDASRSRLAVFVGVGLTLFAVLNATAAIYLYRGINDL CCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHH RTVEGRLEELGAFEQRIVARLDTVNNGFQSRFEKLDSQLQGRFNEINGSIARLEQNPSAR HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCC DDSGISAAEPVVVTSTVADASSGNSDVAAEPAAAETPRPIKRRSAAPPGPNPAYQRTETP CCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCC DGKVYYRKIN CCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA