Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is 13475406

Identifier: 13475406

GI number: 13475406

Start: 5281949

End: 5282587

Strand: Reverse

Name: 13475406

Synonym: mll6465

Alternate gene names: NA

Gene position: 5282587-5281949 (Counterclockwise)

Preceding gene: 13475407

Following gene: 13475405

Centisome position: 75.08

GC content: 66.35

Gene sequence:

>639_bases
ATGAATGCAGTGCCTCAATGGCGGCTCGCAGGCGACTGGTTCGACATCTGCAGCTGCGACATCCCTTGCCCTTGTGAGTT
CGCCCAGCGGCCGACCGGCAATCACTGCCAGGGCGTGCTCGCCTGGCATGTGCGCGAGGGCCAGTATGGCGACGTGAAGC
TCGACGGCCTGACGCTGGTGGCGCTCGGCGAGTTCGAAGGCAATCTATGGGCCGGCGAGGCAAAGGCCGTGATGGGCATG
TACCTCGACGAGAAGGCGAATGAGTCGCAGCGCGAAGCCCTGCAGGCGATCTTCGGCGGCCACGCCGGCGGCTGGCCGGC
GGGCTTTGCCGCCAATGTCGGCGAGATGCGTGGCATGGAGTTCGTGCCAATCACTTTCGAGGTGGCGGGCGACCTCGCCA
CCTGGCGGGTCGAAATTCCTGGCCTCGTCGTCGGCCGCGTGGAAGCGCTTTCCGGTCCTACAACACCGCCCGGCAAGCGG
GTGCAGACAATCAATCCGCCGGGCTCGGAGGTCGGCCCGGGCCAGGTTGCCACCTGGGGGCGTTCTGTCGAGGTGAGCAC
CAAGGGCTTCGGGCTAGACTGGATCGGCACGGCCCGCTCGAGCAAGCACATTCCATTTGACTGGACCGGCCCGAGCTAG

Upstream 100 bases:

>100_bases
TGGGGACCGGTCCATCAAAATCAGCGAGCGACGCACGAATTACTGGAGTGCGCTGAGCCTTCGACGTATAAACGGGCCTA
GGTTTCGGGGAGAAAGGGCC

Downstream 100 bases:

>100_bases
AGCGTGCCGATGCCCGACGCGTTCCCCAGGAAAACGTGGCGGCTTCGGAATTTGCGCGGCATGCCGCTCGGCCTTCTCGC
ATCGCTCGTCGTGCTGACAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MNAVPQWRLAGDWFDICSCDIPCPCEFAQRPTGNHCQGVLAWHVREGQYGDVKLDGLTLVALGEFEGNLWAGEAKAVMGM
YLDEKANESQREALQAIFGGHAGGWPAGFAANVGEMRGMEFVPITFEVAGDLATWRVEIPGLVVGRVEALSGPTTPPGKR
VQTINPPGSEVGPGQVATWGRSVEVSTKGFGLDWIGTARSSKHIPFDWTGPS

Sequences:

>Translated_212_residues
MNAVPQWRLAGDWFDICSCDIPCPCEFAQRPTGNHCQGVLAWHVREGQYGDVKLDGLTLVALGEFEGNLWAGEAKAVMGM
YLDEKANESQREALQAIFGGHAGGWPAGFAANVGEMRGMEFVPITFEVAGDLATWRVEIPGLVVGRVEALSGPTTPPGKR
VQTINPPGSEVGPGQVATWGRSVEVSTKGFGLDWIGTARSSKHIPFDWTGPS
>Mature_212_residues
MNAVPQWRLAGDWFDICSCDIPCPCEFAQRPTGNHCQGVLAWHVREGQYGDVKLDGLTLVALGEFEGNLWAGEAKAVMGM
YLDEKANESQREALQAIFGGHAGGWPAGFAANVGEMRGMEFVPITFEVAGDLATWRVEIPGLVVGRVEALSGPTTPPGKR
VQTINPPGSEVGPGQVATWGRSVEVSTKGFGLDWIGTARSSKHIPFDWTGPS

Specific function: Unknown

COG id: COG5588

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22725; Mature: 22725

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVPQWRLAGDWFDICSCDIPCPCEFAQRPTGNHCQGVLAWHVREGQYGDVKLDGLTLV
CCCCCCCEECCCCHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCEEEE
ALGEFEGNLWAGEAKAVMGMYLDEKANESQREALQAIFGGHAGGWPAGFAANVGEMRGME
EEECCCCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCE
FVPITFEVAGDLATWRVEIPGLVVGRVEALSGPTTPPGKRVQTINPPGSEVGPGQVATWG
EEEEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECC
RSVEVSTKGFGLDWIGTARSSKHIPFDWTGPS
CEEEEECCCCCEEEEECCCCCCCCCEECCCCC
>Mature Secondary Structure
MNAVPQWRLAGDWFDICSCDIPCPCEFAQRPTGNHCQGVLAWHVREGQYGDVKLDGLTLV
CCCCCCCEECCCCHHHCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCEEECCEEEE
ALGEFEGNLWAGEAKAVMGMYLDEKANESQREALQAIFGGHAGGWPAGFAANVGEMRGME
EEECCCCCEECCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCE
FVPITFEVAGDLATWRVEIPGLVVGRVEALSGPTTPPGKRVQTINPPGSEVGPGQVATWG
EEEEEEEECCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCEEECC
RSVEVSTKGFGLDWIGTARSSKHIPFDWTGPS
CEEEEECCCCCEEEEECCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA