| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475405
Identifier: 13475405
GI number: 13475405
Start: 5281079
End: 5281945
Strand: Reverse
Name: 13475405
Synonym: mll6464
Alternate gene names: NA
Gene position: 5281945-5281079 (Counterclockwise)
Preceding gene: 13475406
Following gene: 13475404
Centisome position: 75.07
GC content: 64.82
Gene sequence:
>867_bases GTGCCGATGCCCGACGCGTTCCCCAGGAAAACGTGGCGGCTTCGGAATTTGCGCGGCATGCCGCTCGGCCTTCTCGCATC GCTCGTCGTGCTGACAGCGGCGGCGTGGGCGCTCACCCTCTACCAGACCTTCAGCATGGACTTGCCCATGGGCATTGCGG TGCGCGGCGGAATGGAGGGAATGGAAGGCATGGCCGGCATGGCGATGGCCGGAATTGCGGCCGACGGCTGGTCACTCGCC GGCATCGCCGCCTTTCTCGCTGTATGGACTGTGATGATGGCGGCTATGATGCTGCCGGCCGCGGCACCCATGATCTTTAT GTTCGCGGCGGCGCAGGCTAGGCGCGGACAGCAGGTGGCCGTCCCGACGTGGATCTTCGTCGCCGGCTACATGCTCGTCT GGGCGGCGGCGGGCCTTCTCGTGTATGTCCTGGTCCAGTTCGGCAGCGAGTTTGCGACGAGCCTCGATCCGCCTCAGCGT TCGAAATGGGCGCCGCTCGCGCTCGGTGTCACGCTAGGCGTCGCCGGACTCTACCAATTCACTACCCTCAAGCACATTTG CCTCAGCCATTGCCGTTCGCCGCTCGCTTTCGTGGCCCAGCACTGGCGCGACGGGCGGGTTGGCGCGCTCGAGATGGGGC TGCGCCACGGGCTGTATTGCTTCGGTTGCTGCTGGGCGCTGTTCGCCGTGCTGGTCGCAGCGGGCGTCATGAGCCTCGCC TGGATGCTGCTTTTGACACTGATCGTCTTCGTCGAGAAGCTGATGCAGCGTGGCCGACGCTTCGAAGGTGCTTTGGGCAT CGCTTTAGTGGTCCTCGGGATCATTGTATCGCTGGGGGCGATCGATATGCCTTGGATGGGCGGCTAG
Upstream 100 bases:
>100_bases TTCTGTCGAGGTGAGCACCAAGGGCTTCGGGCTAGACTGGATCGGCACGGCCCGCTCGAGCAAGCACATTCCATTTGACT GGACCGGCCCGAGCTAGAGC
Downstream 100 bases:
>100_bases ACGAGCAGGAGCATAAGCATCTCTGCTGTGACGGCAGACTCCTTCGACGGCAATCCATTCGCATCGCGCCCGTTTTTTAG TAGGCTGTCGCAAGGCAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MPMPDAFPRKTWRLRNLRGMPLGLLASLVVLTAAAWALTLYQTFSMDLPMGIAVRGGMEGMEGMAGMAMAGIAADGWSLA GIAAFLAVWTVMMAAMMLPAAAPMIFMFAAAQARRGQQVAVPTWIFVAGYMLVWAAAGLLVYVLVQFGSEFATSLDPPQR SKWAPLALGVTLGVAGLYQFTTLKHICLSHCRSPLAFVAQHWRDGRVGALEMGLRHGLYCFGCCWALFAVLVAAGVMSLA WMLLLTLIVFVEKLMQRGRRFEGALGIALVVLGIIVSLGAIDMPWMGG
Sequences:
>Translated_288_residues MPMPDAFPRKTWRLRNLRGMPLGLLASLVVLTAAAWALTLYQTFSMDLPMGIAVRGGMEGMEGMAGMAMAGIAADGWSLA GIAAFLAVWTVMMAAMMLPAAAPMIFMFAAAQARRGQQVAVPTWIFVAGYMLVWAAAGLLVYVLVQFGSEFATSLDPPQR SKWAPLALGVTLGVAGLYQFTTLKHICLSHCRSPLAFVAQHWRDGRVGALEMGLRHGLYCFGCCWALFAVLVAAGVMSLA WMLLLTLIVFVEKLMQRGRRFEGALGIALVVLGIIVSLGAIDMPWMGG >Mature_287_residues PMPDAFPRKTWRLRNLRGMPLGLLASLVVLTAAAWALTLYQTFSMDLPMGIAVRGGMEGMEGMAGMAMAGIAADGWSLAG IAAFLAVWTVMMAAMMLPAAAPMIFMFAAAQARRGQQVAVPTWIFVAGYMLVWAAAGLLVYVLVQFGSEFATSLDPPQRS KWAPLALGVTLGVAGLYQFTTLKHICLSHCRSPLAFVAQHWRDGRVGALEMGLRHGLYCFGCCWALFAVLVAAGVMSLAW MLLLTLIVFVEKLMQRGRRFEGALGIALVVLGIIVSLGAIDMPWMGG
Specific function: Unknown
COG id: COG5486
COG function: function code S; Predicted metal-binding integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30976; Mature: 30845
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 8.0 %Met (Translated Protein) 9.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 7.7 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMPDAFPRKTWRLRNLRGMPLGLLASLVVLTAAAWALTLYQTFSMDLPMGIAVRGGMEG CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH MEGMAGMAMAGIAADGWSLAGIAAFLAVWTVMMAAMMLPAAAPMIFMFAAAQARRGQQVA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC VPTWIFVAGYMLVWAAAGLLVYVLVQFGSEFATSLDPPQRSKWAPLALGVTLGVAGLYQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH TTLKHICLSHCRSPLAFVAQHWRDGRVGALEMGLRHGLYCFGCCWALFAVLVAAGVMSLA HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMLLLTLIVFVEKLMQRGRRFEGALGIALVVLGIIVSLGAIDMPWMGG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure PMPDAFPRKTWRLRNLRGMPLGLLASLVVLTAAAWALTLYQTFSMDLPMGIAVRGGMEG CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCHH MEGMAGMAMAGIAADGWSLAGIAAFLAVWTVMMAAMMLPAAAPMIFMFAAAQARRGQQVA HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC VPTWIFVAGYMLVWAAAGLLVYVLVQFGSEFATSLDPPQRSKWAPLALGVTLGVAGLYQF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH TTLKHICLSHCRSPLAFVAQHWRDGRVGALEMGLRHGLYCFGCCWALFAVLVAAGVMSLA HHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WMLLLTLIVFVEKLMQRGRRFEGALGIALVVLGIIVSLGAIDMPWMGG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA