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The map label for this gene is agpA [H]

Identifier: 13475390

GI number: 13475390

Start: 5266054

End: 5268135

Strand: Direct

Name: agpA [H]

Synonym: mlr6444

Alternate gene names: 13475390

Gene position: 5266054-5268135 (Clockwise)

Preceding gene: 13475389

Following gene: 13475391

Centisome position: 74.84

GC content: 61.38

Gene sequence:

>2082_bases
ATGAGAAACCTACGCAGCATTGGCATTGCCGCCGGACTGGCGCTGAGCGTCTCGGTTCCGGCACTCAACGCTTTCGCATC
AGAGCCGACAGTCCCGCCGGTGCCGGCGACCTTTCCGGCCGAGGGCAAGATCAAATACGTGGCGCGCGACTCCATCCTGG
AGTTCAAGGCCCTGCCGGAATATCACGAGCCGGATTGGGTGACCGAAAAATACGTCAAGACCGGCAAGCTGCCGCCGGTG
AAAGACAGGCTGCCGAAAGAACCGCTGGTCTTCAAGACGGGCAACATGCAAGACGGCATCGGCGTCTATGGCGATACGAT
GCGCCATGTCATCGGCGGCCGGCCGGAAGGCTGGAATTATGGCGCCGGCCAGACACAGGGCTGGGGCGGCATCGATATCG
GCCTTTCCGAATGCCTGACGCGCACCGCGCCGCTGTTCCAGGTCGAGGCCAAGGACACCGAGCCGCTGCCGAACCTGGCC
AGGAGCTGGGACTGGTCGAAGGACGGCCACAAGCTGACCATGCATCTTGTCGAAGGCGCAAAATGGTCGGATGGCGTTGC
CTTCAACGCCGACGACGTCATGTTCTACTGGGACGACGAGGTCGTTGATCCCAACGTCTCGCCATTGAACGGCGCGACGC
CGGAAACCTTCGGTGTCGGCACGACGCTGAAGAAGATCGACGACTACACCGTCGAATGGACCTTCAAGGAAGCCTTTCCG
AAGCAGTACCTCTATGCGATGGCCTACGGCACCTTCTGTCCCGGCCCCGCGCACATCCTGAAGCCGCAGCATCCGAAATA
TTCGAAGAACACCTACGACCAGTTCAAGAATGCCTTCCCGCCGGAATTCATGAACATGCCGGTGATGGGCGCCTGGGTGC
CGGTCGAATACCGGCCGGACGACATCATCGTCATGCGCCGCAACCCCTACTACTGGAAGGTCGACGAGAAGGGCAACCAG
CTGCCCTACCTCAACGAACTGCACTACAAGCTGTCGACCTGGGCCGACCGCGACGTCCAGGCGGTCGCCGGCGCGGCCGA
CTTCTCCAATCTGGAGCAGCCGGAAAACTTTGTCGCCTCGCTGAAGCGCGCCGCTGAAGCCAACGCGCCGGCACGGCTCG
CCTTCGGTCCACGCCTCATCGGCTACAATCTGCGCATGAACTATTCCGCCAATGGCTGGGGCAATCCTGACGAACGCAGC
CAGGCGGTTCGCGAGCTGAACCGCAATGAGGACTTCCGCAAGGCTGTCACCATGGCGCTCGACCGCAAGGCGCTGGGCGA
CTCCCTGGTCAAGGGGCCGTTCACCGCCATCTATCCCGGCGGCTTCTCTTCGGGCACCAGCTTCTATGATCGCAAGTCCA
CCGTCTACTATCCGTTCGACCTCGCTGGCGCCAAGGCCGAACTCGCCAAGGCCGGCCTCAAGGATACCGACGGCGACGGT
TTCGTGAACTTCCCGGCCGGCACCGCCGGCGGCAAGAACGTCGAGATCGTGATGCTGGTCAACAACGACTACGGCACAGA
CAAAAGCCTTGCCGAAGGTGTCGTCGCCCAGATGGAAAAGCTGGGCTTGAGGGTCGTTCTCAACGGCCTCAACGGCACCC
AGCGCGATGCCTCGCAATACTCCGGCCGCTTCGACTGGCTGATCCGGCGCAACGACCAGGAACTGACCTCGGTCGTGCAG
AACACCGAGCAGCTCGCGCCTGTCGGTCCGAAGACCAGTTGGAACCACCGCGCGCCGGAAAGTGGCGAGGTCGACCTGAT
GCCTTTCGAAAAAGACCTGGTCGATATCGTCAACAAGTTTGTCGCGTCGGAAGACAACGACAAGCGCGCCAGCCTGATGA
AAGAGTTCCAGAAGATCTCGACCGAACATGTCTACAATGTCGGCCTGACGGAATATCCCGGCGCGCTGATCGTCAACAAG
CGCTTCTCGAACATTCCGCAGGGCACGCCGATCTTCATGTTCAACTGGGCCGAGGATTCGATCGTCCGCGAACGCGTCTT
CGTCGCGGCCGACAAGCAGGCGAAATACGAATTGTTCCCTCAGGAGCTCCCGGGCAAGCCCGGAGACAAGGGTCCGATGT
AA

Upstream 100 bases:

>100_bases
CCCCGGGCGCAGCGACGGACCTTGGGAGGCAGGTCCATCGCATTGAGCCGTCCAGGCAGAGACGAGCAGCAGAAAACGTC
TGAACATGAGGGAGGAGACT

Downstream 100 bases:

>100_bases
GTTTACCTCCCCTGACCAAAAGAGACCCGGCCGCGCCGCTGGCGCGGCCGGGGCAAACCAACCCTCCGAACGACCCTCAA
TGGGAGCGTCCGGCGAAATG

Product: ABC transporter, periplasmic alpha-galactoside binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 693; Mature: 693

Protein sequence:

>693_residues
MRNLRSIGIAAGLALSVSVPALNAFASEPTVPPVPATFPAEGKIKYVARDSILEFKALPEYHEPDWVTEKYVKTGKLPPV
KDRLPKEPLVFKTGNMQDGIGVYGDTMRHVIGGRPEGWNYGAGQTQGWGGIDIGLSECLTRTAPLFQVEAKDTEPLPNLA
RSWDWSKDGHKLTMHLVEGAKWSDGVAFNADDVMFYWDDEVVDPNVSPLNGATPETFGVGTTLKKIDDYTVEWTFKEAFP
KQYLYAMAYGTFCPGPAHILKPQHPKYSKNTYDQFKNAFPPEFMNMPVMGAWVPVEYRPDDIIVMRRNPYYWKVDEKGNQ
LPYLNELHYKLSTWADRDVQAVAGAADFSNLEQPENFVASLKRAAEANAPARLAFGPRLIGYNLRMNYSANGWGNPDERS
QAVRELNRNEDFRKAVTMALDRKALGDSLVKGPFTAIYPGGFSSGTSFYDRKSTVYYPFDLAGAKAELAKAGLKDTDGDG
FVNFPAGTAGGKNVEIVMLVNNDYGTDKSLAEGVVAQMEKLGLRVVLNGLNGTQRDASQYSGRFDWLIRRNDQELTSVVQ
NTEQLAPVGPKTSWNHRAPESGEVDLMPFEKDLVDIVNKFVASEDNDKRASLMKEFQKISTEHVYNVGLTEYPGALIVNK
RFSNIPQGTPIFMFNWAEDSIVRERVFVAADKQAKYELFPQELPGKPGDKGPM

Sequences:

>Translated_693_residues
MRNLRSIGIAAGLALSVSVPALNAFASEPTVPPVPATFPAEGKIKYVARDSILEFKALPEYHEPDWVTEKYVKTGKLPPV
KDRLPKEPLVFKTGNMQDGIGVYGDTMRHVIGGRPEGWNYGAGQTQGWGGIDIGLSECLTRTAPLFQVEAKDTEPLPNLA
RSWDWSKDGHKLTMHLVEGAKWSDGVAFNADDVMFYWDDEVVDPNVSPLNGATPETFGVGTTLKKIDDYTVEWTFKEAFP
KQYLYAMAYGTFCPGPAHILKPQHPKYSKNTYDQFKNAFPPEFMNMPVMGAWVPVEYRPDDIIVMRRNPYYWKVDEKGNQ
LPYLNELHYKLSTWADRDVQAVAGAADFSNLEQPENFVASLKRAAEANAPARLAFGPRLIGYNLRMNYSANGWGNPDERS
QAVRELNRNEDFRKAVTMALDRKALGDSLVKGPFTAIYPGGFSSGTSFYDRKSTVYYPFDLAGAKAELAKAGLKDTDGDG
FVNFPAGTAGGKNVEIVMLVNNDYGTDKSLAEGVVAQMEKLGLRVVLNGLNGTQRDASQYSGRFDWLIRRNDQELTSVVQ
NTEQLAPVGPKTSWNHRAPESGEVDLMPFEKDLVDIVNKFVASEDNDKRASLMKEFQKISTEHVYNVGLTEYPGALIVNK
RFSNIPQGTPIFMFNWAEDSIVRERVFVAADKQAKYELFPQELPGKPGDKGPM
>Mature_693_residues
MRNLRSIGIAAGLALSVSVPALNAFASEPTVPPVPATFPAEGKIKYVARDSILEFKALPEYHEPDWVTEKYVKTGKLPPV
KDRLPKEPLVFKTGNMQDGIGVYGDTMRHVIGGRPEGWNYGAGQTQGWGGIDIGLSECLTRTAPLFQVEAKDTEPLPNLA
RSWDWSKDGHKLTMHLVEGAKWSDGVAFNADDVMFYWDDEVVDPNVSPLNGATPETFGVGTTLKKIDDYTVEWTFKEAFP
KQYLYAMAYGTFCPGPAHILKPQHPKYSKNTYDQFKNAFPPEFMNMPVMGAWVPVEYRPDDIIVMRRNPYYWKVDEKGNQ
LPYLNELHYKLSTWADRDVQAVAGAADFSNLEQPENFVASLKRAAEANAPARLAFGPRLIGYNLRMNYSANGWGNPDERS
QAVRELNRNEDFRKAVTMALDRKALGDSLVKGPFTAIYPGGFSSGTSFYDRKSTVYYPFDLAGAKAELAKAGLKDTDGDG
FVNFPAGTAGGKNVEIVMLVNNDYGTDKSLAEGVVAQMEKLGLRVVLNGLNGTQRDASQYSGRFDWLIRRNDQELTSVVQ
NTEQLAPVGPKTSWNHRAPESGEVDLMPFEKDLVDIVNKFVASEDNDKRASLMKEFQKISTEHVYNVGLTEYPGALIVNK
RFSNIPQGTPIFMFNWAEDSIVRERVFVAADKQAKYELFPQELPGKPGDKGPM

Specific function: Probably involved in an alpha-galactosides intake transport system [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787495, Length=255, Percent_Identity=27.4509803921569, Blast_Score=66, Evalue=7e-12,

Paralogues:

None

Copy number: 760 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 500 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2360 Molecules/Cell In: Stationary-Phase,

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 77159; Mature: 77159

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLRSIGIAAGLALSVSVPALNAFASEPTVPPVPATFPAEGKIKYVARDSILEFKALPE
CCCCHHHHHHHCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCC
YHEPDWVTEKYVKTGKLPPVKDRLPKEPLVFKTGNMQDGIGVYGDTMRHVIGGRPEGWNY
CCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
GAGQTQGWGGIDIGLSECLTRTAPLFQVEAKDTEPLPNLARSWDWSKDGHKLTMHLVEGA
CCCCCCCCCCEECCHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEECCC
KWSDGVAFNADDVMFYWDDEVVDPNVSPLNGATPETFGVGTTLKKIDDYTVEWTFKEAFP
CCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEHHHCH
KQYLYAMAYGTFCPGPAHILKPQHPKYSKNTYDQFKNAFPPEFMNMPVMGAWVPVEYRPD
HHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEEEEEECCC
DIIVMRRNPYYWKVDEKGNQLPYLNELHYKLSTWADRDVQAVAGAADFSNLEQPENFVAS
CEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCHHHHHHH
LKRAAEANAPARLAFGPRLIGYNLRMNYSANGWGNPDERSQAVRELNRNEDFRKAVTMAL
HHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
DRKALGDSLVKGPFTAIYPGGFSSGTSFYDRKSTVYYPFDLAGAKAELAKAGLKDTDGDG
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCC
FVNFPAGTAGGKNVEIVMLVNNDYGTDKSLAEGVVAQMEKLGLRVVLNGLNGTQRDASQY
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH
SGRFDWLIRRNDQELTSVVQNTEQLAPVGPKTSWNHRAPESGEVDLMPFEKDLVDIVNKF
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
VASEDNDKRASLMKEFQKISTEHVYNVGLTEYPGALIVNKRFSNIPQGTPIFMFNWAEDS
HCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECHHCCCCCCCCEEEEECCCHH
IVRERVFVAADKQAKYELFPQELPGKPGDKGPM
HHHHHHEEEECCCCCEEECHHHCCCCCCCCCCC
>Mature Secondary Structure
MRNLRSIGIAAGLALSVSVPALNAFASEPTVPPVPATFPAEGKIKYVARDSILEFKALPE
CCCCHHHHHHHCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHCCCC
YHEPDWVTEKYVKTGKLPPVKDRLPKEPLVFKTGNMQDGIGVYGDTMRHVIGGRPEGWNY
CCCCCHHHHHHHHCCCCCCHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHCCCCCCCCC
GAGQTQGWGGIDIGLSECLTRTAPLFQVEAKDTEPLPNLARSWDWSKDGHKLTMHLVEGA
CCCCCCCCCCEECCHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCCEEEEEEECCC
KWSDGVAFNADDVMFYWDDEVVDPNVSPLNGATPETFGVGTTLKKIDDYTVEWTFKEAFP
CCCCCEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCEEEEEEEHHHCH
KQYLYAMAYGTFCPGPAHILKPQHPKYSKNTYDQFKNAFPPEFMNMPVMGAWVPVEYRPD
HHHHHHHHHCCCCCCCHHCCCCCCCCCCCCHHHHHHHCCCHHHHCCCEEEEEEEEEECCC
DIIVMRRNPYYWKVDEKGNQLPYLNELHYKLSTWADRDVQAVAGAADFSNLEQPENFVAS
CEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHHHCCCCHHHHHHH
LKRAAEANAPARLAFGPRLIGYNLRMNYSANGWGNPDERSQAVRELNRNEDFRKAVTMAL
HHHHHHCCCCEEEECCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH
DRKALGDSLVKGPFTAIYPGGFSSGTSFYDRKSTVYYPFDLAGAKAELAKAGLKDTDGDG
HHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCC
FVNFPAGTAGGKNVEIVMLVNNDYGTDKSLAEGVVAQMEKLGLRVVLNGLNGTQRDASQY
EEECCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHH
SGRFDWLIRRNDQELTSVVQNTEQLAPVGPKTSWNHRAPESGEVDLMPFEKDLVDIVNKF
CCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHH
VASEDNDKRASLMKEFQKISTEHVYNVGLTEYPGALIVNKRFSNIPQGTPIFMFNWAEDS
HCCCCCCHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECHHCCCCCCCCEEEEECCCHH
IVRERVFVAADKQAKYELFPQELPGKPGDKGPM
HHHHHHEEEECCCCCEEECHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9791127; 11481431 [H]