| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475375
Identifier: 13475375
GI number: 13475375
Start: 5245373
End: 5246575
Strand: Reverse
Name: 13475375
Synonym: mll6424
Alternate gene names: NA
Gene position: 5246575-5245373 (Counterclockwise)
Preceding gene: 13475376
Following gene: 13475374
Centisome position: 74.57
GC content: 66.58
Gene sequence:
>1203_bases ATGCGCAGCCTTTCGGTGGTAGGCGGGATCTACCGCGAGCGCTGCCTGCAACCGACCTGGGATGCCGTCCTCGGATCCGC CGGTCGTGCCGCCCAGGCACTCGGCACCGTCAAGGCTTCGCGGAAGCGGTTGCACGCTTACATGAGCGATCGGGCGCGGA GCGAAGTCGAACTCCTCGCCGAACTCGCCGACTTCGAGTTGGTACCCACGGACCTGCCTTTCCTGGTGTTGTTTGACTAC GCACATACGCTTGGCGACCCTGTCATATCGCCGCCGATCGGCTTGATGGGCCAGCGACTGCCGCTCGCCGTCAAAGACGA CGTCGTGCTCCGCTACGGCATGCTCGAGGGCGATGCCGTCGTCGCCGCCAACATCGCGGTTTACGATCCACAATCCGCTT TCGGCGCTGCCGCGTTCACTGCCAACGGCTCGTCGGCCAAGAGGCTTGCAGTGGTGCTCAACAGGCTCGAGTTGCGCTCG ATCACCGGCGAGGAAGATCCTCGCGCCGGTGCCGACTGGCTGTTCCGGAACGACGGTGCCGAGGTGGTCGTGCTGAAGAT GGGGGCCTTGGGCGCACGGGTAATCACGCCGGTCGGGGCGTGGGAAATCCCCCTCTATCGATCGGAGCGCGTTTGGAAAT TGGGATCCGGCGACGTCTTCTCCGCAACGTTCGCTGCAATGTGGGCCCTGGAGGACATGGCGCCCGATGACGCGGCGGAC ATCGCGTCGCGGGCGACCGCGTGGTACTGCGGCCATCGCGCCCTTCCCACCCCGGACGCCGCCACGCTTGCCACGATGCC GTTCGAGCAGGTGCGCCCGGGTACGGGCCGCATATACTTGGCGGCGCCGTTCTTCGACCTCGGGCAGCGCTGGCTGGTGG AGGAAAGCAGGCGCGCCCTGCTGCAAGCAGGTGCCCAGGTGTTCTCGCCCATCCACGAGGTCGGACCGGGCGCCGCCGAG GTCGTCGCTCCGGCGGATCTCGCCGGCATCGAGGACTGCGACGTACTGCTGGCGATCGTCAACGGGATGGACCCCGGGAC CGTCTTTGAGGCGGGCTACGCCATCCGCAAGGGCATACCGGTCGTCGCGCTGGCCGAGAATTCGCGGGAGGAGGATCTCA AGATGTTCGTAGGCTCCGGGGCGACGGTGACCAGCGACTTCGCGACGGCCATCTACCAGGCTGTCTGGAGACTGCCGCGA TGA
Upstream 100 bases:
>100_bases GGCAGGTCATCAACTGCATCGTCCAACGTGGCGTGGCCTACACGGCGACGGTGCTGGCCATAGCGGGCGGCGTCTACACC GTCGAGGTGGTACCCGTCTG
Downstream 100 bases:
>100_bases CTACCGCCTTGCTCCTGTCGGGCGGCATGGACTCTGTCAGCATCGCATGGTGGCTTCGGCCCGACGTCGCGTTGACGATC GACTACGGCCAGAAGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Nucleoside 2-Deoxyribosyltransferase Protein; Nucleoside 2-Deoxyribosyltransferase Family; Sugar Kinases Ribokinase Family; Nucleoside 2-Deoxyribosyltransferase Family Protein
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MRSLSVVGGIYRERCLQPTWDAVLGSAGRAAQALGTVKASRKRLHAYMSDRARSEVELLAELADFELVPTDLPFLVLFDY AHTLGDPVISPPIGLMGQRLPLAVKDDVVLRYGMLEGDAVVAANIAVYDPQSAFGAAAFTANGSSAKRLAVVLNRLELRS ITGEEDPRAGADWLFRNDGAEVVVLKMGALGARVITPVGAWEIPLYRSERVWKLGSGDVFSATFAAMWALEDMAPDDAAD IASRATAWYCGHRALPTPDAATLATMPFEQVRPGTGRIYLAAPFFDLGQRWLVEESRRALLQAGAQVFSPIHEVGPGAAE VVAPADLAGIEDCDVLLAIVNGMDPGTVFEAGYAIRKGIPVVALAENSREEDLKMFVGSGATVTSDFATAIYQAVWRLPR
Sequences:
>Translated_400_residues MRSLSVVGGIYRERCLQPTWDAVLGSAGRAAQALGTVKASRKRLHAYMSDRARSEVELLAELADFELVPTDLPFLVLFDY AHTLGDPVISPPIGLMGQRLPLAVKDDVVLRYGMLEGDAVVAANIAVYDPQSAFGAAAFTANGSSAKRLAVVLNRLELRS ITGEEDPRAGADWLFRNDGAEVVVLKMGALGARVITPVGAWEIPLYRSERVWKLGSGDVFSATFAAMWALEDMAPDDAAD IASRATAWYCGHRALPTPDAATLATMPFEQVRPGTGRIYLAAPFFDLGQRWLVEESRRALLQAGAQVFSPIHEVGPGAAE VVAPADLAGIEDCDVLLAIVNGMDPGTVFEAGYAIRKGIPVVALAENSREEDLKMFVGSGATVTSDFATAIYQAVWRLPR >Mature_400_residues MRSLSVVGGIYRERCLQPTWDAVLGSAGRAAQALGTVKASRKRLHAYMSDRARSEVELLAELADFELVPTDLPFLVLFDY AHTLGDPVISPPIGLMGQRLPLAVKDDVVLRYGMLEGDAVVAANIAVYDPQSAFGAAAFTANGSSAKRLAVVLNRLELRS ITGEEDPRAGADWLFRNDGAEVVVLKMGALGARVITPVGAWEIPLYRSERVWKLGSGDVFSATFAAMWALEDMAPDDAAD IASRATAWYCGHRALPTPDAATLATMPFEQVRPGTGRIYLAAPFFDLGQRWLVEESRRALLQAGAQVFSPIHEVGPGAAE VVAPADLAGIEDCDVLLAIVNGMDPGTVFEAGYAIRKGIPVVALAENSREEDLKMFVGSGATVTSDFATAIYQAVWRLPR
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42918; Mature: 42918
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSLSVVGGIYRERCLQPTWDAVLGSAGRAAQALGTVKASRKRLHAYMSDRARSEVELLA CCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELADFELVPTDLPFLVLFDYAHTLGDPVISPPIGLMGQRLPLAVKDDVVLRYGMLEGDAV HHHCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCEE VAANIAVYDPQSAFGAAAFTANGSSAKRLAVVLNRLELRSITGEEDPRAGADWLFRNDGA EEEEEEEECCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC EVVVLKMGALGARVITPVGAWEIPLYRSERVWKLGSGDVFSATFAAMWALEDMAPDDAAD EEEEEEECCCCCCCCCCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHH IASRATAWYCGHRALPTPDAATLATMPFEQVRPGTGRIYLAAPFFDLGQRWLVEESRRAL HHHHHHHEEECCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH LQAGAQVFSPIHEVGPGAAEVVAPADLAGIEDCDVLLAIVNGMDPGTVFEAGYAIRKGIP HHHHHHHHHHHHHHCCCHHHEECCHHHCCCCHHHHHHHHHCCCCCCHHHHCCHHHHCCCC VVALAENSREEDLKMFVGSGATVTSDFATAIYQAVWRLPR EEEECCCCCCCHHHHEECCCCEEHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRSLSVVGGIYRERCLQPTWDAVLGSAGRAAQALGTVKASRKRLHAYMSDRARSEVELLA CCCHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELADFELVPTDLPFLVLFDYAHTLGDPVISPPIGLMGQRLPLAVKDDVVLRYGMLEGDAV HHHCCEECCCCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCCEEECCCEEEEECCCCCCEE VAANIAVYDPQSAFGAAAFTANGSSAKRLAVVLNRLELRSITGEEDPRAGADWLFRNDGA EEEEEEEECCCHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCC EVVVLKMGALGARVITPVGAWEIPLYRSERVWKLGSGDVFSATFAAMWALEDMAPDDAAD EEEEEEECCCCCCCCCCCCCEECCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCHHH IASRATAWYCGHRALPTPDAATLATMPFEQVRPGTGRIYLAAPFFDLGQRWLVEESRRAL HHHHHHHEEECCCCCCCCCCCCEEECCHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH LQAGAQVFSPIHEVGPGAAEVVAPADLAGIEDCDVLLAIVNGMDPGTVFEAGYAIRKGIP HHHHHHHHHHHHHHCCCHHHEECCHHHCCCCHHHHHHHHHCCCCCCHHHHCCHHHHCCCC VVALAENSREEDLKMFVGSGATVTSDFATAIYQAVWRLPR EEEECCCCCCCHHHHEECCCCEEHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA