| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475376
Identifier: 13475376
GI number: 13475376
Start: 5246877
End: 5247746
Strand: Reverse
Name: 13475376
Synonym: mll6426
Alternate gene names: NA
Gene position: 5247746-5246877 (Counterclockwise)
Preceding gene: 13475379
Following gene: 13475375
Centisome position: 74.58
GC content: 63.1
Gene sequence:
>870_bases GTGTTTCACGAAATGAATGTAATGCATACTTCCTCGGAACAATTTATGCAACACGTCATCTCCCTCCACAACGGCACACC CGTGAGCCTCTTCCTGCCCGATCCTGCGGAGTCCGTGGTCCCGGGAGTGGCTTGGGGCCGGTTTGAAGAAGCGTTGACCC CTGCATTCTGGGCCGCACAGGCCTGGATGCAGGAATTGGCGGGCGGTGAGGCGTTCGGCCTTGGCGACACCCTGGCGGAG GAAGTGGCCGCCTGCCTGCTCGGTGGGTACGGTGCGCCCGCTGAAGTCGGTCTCGCGGCATATGGGAGGGTGCGGCAAGC GATGCGCAGCACTGCCGTCGTTGACGTCGGTGCGATCGAGGCCATGCTGACGATGCCTCTGAATGTTGGCGATAGGTTGG TCCGGTATCGCTTCGCCAGGCAAAGGTCGCGACAACTGGGCGAGTGCCTCGCGAGGATCGCCGATATCGACGAGGCCGCG CTGGACGACATCTCGCTCAGGGACGCACTGACGCGGCTGCCGGGGATCGGCCCCAAAACGGCATCTTGGGTTGTCCGGAA CCGCAGGGCGAGCGACGAGGTCGCGATACTCGATATCCACATCGTGCGGGCGTGCGTCCATATGGGAATATTCGGCGGCG GTGCGACGCCTGCGAGTGACTACGTGAGCCTCGAATCCCGTTTCATCGGGTTCTGCCGCGCTGCCGGCCTACGCGCTTCC TTGCTCGATGCACTGATGTGGCGAACCATGCGATCGATCGGCCCGTCATTCGCGGGCTTGCGGCCAGCGTCGAATCCGAG TTCAACTGGAGGACGCAGCAAGGGGAAGACAGCATGTCCGGAGGAGGTGGCTCGAGCAGGGACGATCTGA
Upstream 100 bases:
>100_bases GGGTGACGCGGCAGAACTCAGCCAACTCGCGCTGGCGAGTGCGAGTGCTCCTTAGGACGGCGTTCACGGTATCGATGATA TCCGTCGATTGCATTGACCT
Downstream 100 bases:
>100_bases GTCCGGGAATCGGAGGGGGGCCGGACACCTGCGGCCAGACCTACAACGCCCCCATCAACAGCCCTAAGCCTTCCGTGCTG GGGCCCGTGTCCATCGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MFHEMNVMHTSSEQFMQHVISLHNGTPVSLFLPDPAESVVPGVAWGRFEEALTPAFWAAQAWMQELAGGEAFGLGDTLAE EVAACLLGGYGAPAEVGLAAYGRVRQAMRSTAVVDVGAIEAMLTMPLNVGDRLVRYRFARQRSRQLGECLARIADIDEAA LDDISLRDALTRLPGIGPKTASWVVRNRRASDEVAILDIHIVRACVHMGIFGGGATPASDYVSLESRFIGFCRAAGLRAS LLDALMWRTMRSIGPSFAGLRPASNPSSTGGRSKGKTACPEEVARAGTI
Sequences:
>Translated_289_residues MFHEMNVMHTSSEQFMQHVISLHNGTPVSLFLPDPAESVVPGVAWGRFEEALTPAFWAAQAWMQELAGGEAFGLGDTLAE EVAACLLGGYGAPAEVGLAAYGRVRQAMRSTAVVDVGAIEAMLTMPLNVGDRLVRYRFARQRSRQLGECLARIADIDEAA LDDISLRDALTRLPGIGPKTASWVVRNRRASDEVAILDIHIVRACVHMGIFGGGATPASDYVSLESRFIGFCRAAGLRAS LLDALMWRTMRSIGPSFAGLRPASNPSSTGGRSKGKTACPEEVARAGTI >Mature_289_residues MFHEMNVMHTSSEQFMQHVISLHNGTPVSLFLPDPAESVVPGVAWGRFEEALTPAFWAAQAWMQELAGGEAFGLGDTLAE EVAACLLGGYGAPAEVGLAAYGRVRQAMRSTAVVDVGAIEAMLTMPLNVGDRLVRYRFARQRSRQLGECLARIADIDEAA LDDISLRDALTRLPGIGPKTASWVVRNRRASDEVAILDIHIVRACVHMGIFGGGATPASDYVSLESRFIGFCRAAGLRAS LLDALMWRTMRSIGPSFAGLRPASNPSSTGGRSKGKTACPEEVARAGTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30930; Mature: 30930
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFHEMNVMHTSSEQFMQHVISLHNGTPVSLFLPDPAESVVPGVAWGRFEEALTPAFWAAQ CCCCCCHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH AWMQELAGGEAFGLGDTLAEEVAACLLGGYGAPAEVGLAAYGRVRQAMRSTAVVDVGAIE HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLTMPLNVGDRLVRYRFARQRSRQLGECLARIADIDEAALDDISLRDALTRLPGIGPKT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH ASWVVRNRRASDEVAILDIHIVRACVHMGIFGGGATPASDYVSLESRFIGFCRAAGLRAS HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH LLDALMWRTMRSIGPSFAGLRPASNPSSTGGRSKGKTACPEEVARAGTI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure MFHEMNVMHTSSEQFMQHVISLHNGTPVSLFLPDPAESVVPGVAWGRFEEALTPAFWAAQ CCCCCCHHCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH AWMQELAGGEAFGLGDTLAEEVAACLLGGYGAPAEVGLAAYGRVRQAMRSTAVVDVGAIE HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH AMLTMPLNVGDRLVRYRFARQRSRQLGECLARIADIDEAALDDISLRDALTRLPGIGPKT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCH ASWVVRNRRASDEVAILDIHIVRACVHMGIFGGGATPASDYVSLESRFIGFCRAAGLRAS HHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHH LLDALMWRTMRSIGPSFAGLRPASNPSSTGGRSKGKTACPEEVARAGTI HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA