| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475346
Identifier: 13475346
GI number: 13475346
Start: 5216029
End: 5216304
Strand: Reverse
Name: 13475346
Synonym: mll6391
Alternate gene names: NA
Gene position: 5216304-5216029 (Counterclockwise)
Preceding gene: 13475347
Following gene: 13475344
Centisome position: 74.14
GC content: 58.33
Gene sequence:
>276_bases ATGACGATGGAACGCTCGATCCAGTCATGGCTTATAAGGCGGAGAGCGGCGACCAGAGCGCAGATGAGTACGTGCCTACT ACGAGATCGGCTATCGCACCAATTCGAGCGGATCACGATCGATGGCGACACCGTGGCTTTCTTCGAGGGCGGGAAGCCGC TTGAGGCCTGCTACGCCGGCGAAGGCTGTGAAATCCTGACCTCGAAGAAAGGAAACCGCATGGGCGTCAAATTTCGCTTC GGCGTCGCCTTGGCCTCCTCACACTTGGTTGGCTGA
Upstream 100 bases:
>100_bases ACGATCAAGCAGCTGAGAAAGATCACGCATATAGCCACGATCCCGCGGTCCAGCCGATCTACATTTGAGGACGACCAGAT CAAGCAGCGCGCCCTGTCGA
Downstream 100 bases:
>100_bases CTCAGCGGGCAACCCGGTCGAGAAAAGCGTCGAATGCGGCAGCGACAACGCGCATCGCAAAGCGATGCTGCCGCCGTACG CGGACAAAACCCTTTTCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTMERSIQSWLIRRRAATRAQMSTCLLRDRLSHQFERITIDGDTVAFFEGGKPLEACYAGEGCEILTSKKGNRMGVKFRF GVALASSHLVG
Sequences:
>Translated_91_residues MTMERSIQSWLIRRRAATRAQMSTCLLRDRLSHQFERITIDGDTVAFFEGGKPLEACYAGEGCEILTSKKGNRMGVKFRF GVALASSHLVG >Mature_90_residues TMERSIQSWLIRRRAATRAQMSTCLLRDRLSHQFERITIDGDTVAFFEGGKPLEACYAGEGCEILTSKKGNRMGVKFRFG VALASSHLVG
Specific function: Unknown
COG id: COG3443
COG function: function code R; Predicted periplasmic or secreted protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10168; Mature: 10037
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMERSIQSWLIRRRAATRAQMSTCLLRDRLSHQFERITIDGDTVAFFEGGKPLEACYAG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHEECC EGCEILTSKKGNRMGVKFRFGVALASSHLVG CCCEEEECCCCCEEEEEEEEEEHHHCCCCCC >Mature Secondary Structure TMERSIQSWLIRRRAATRAQMSTCLLRDRLSHQFERITIDGDTVAFFEGGKPLEACYAG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCHHHEECC EGCEILTSKKGNRMGVKFRFGVALASSHLVG CCCEEEECCCCCEEEEEEEEEEHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA