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The map label for this gene is dapA [H]

Identifier: 13475334

GI number: 13475334

Start: 5203076

End: 5203966

Strand: Reverse

Name: dapA [H]

Synonym: mll6376

Alternate gene names: 13475334

Gene position: 5203966-5203076 (Counterclockwise)

Preceding gene: 13475335

Following gene: 13475333

Centisome position: 73.96

GC content: 61.62

Gene sequence:

>891_bases
ATGATGACTTTGTTTCGCGGCCTGTCGGCGTTCCCCCTTACGCCAACCGATGCGGAAGGGCATGTCGACACCGAGGGTCT
GGCTCGTTTTCTCGAGCGTATTCAACGCGCCGGAGCGGACTCCATCGGCCTTCTGGGGAGCACGGGCGGTTATGCTTACC
TCACCAGGGAAGAACGCAAGCGTGCCGTTCAGGCTGCCGTGGAATGCATCGGCGGCAAAACGCCTCTTGTCGTGGGTGTG
GGTGCATTGCGTACCAATGAAGCTCAGGCTCTGGCGCGCGATGCCAAATCCGCTGGCGCTGACGGCCTGCTCCTGGCACC
GATGTCCTACGTTCCCCTGAACGAGGACGAAGTCTTCCAGCACTTCGTCGCGGTGGCCGAGGCGGGGGAATTGCCTTTGT
GCATATATAACAATCCAAGCACCACGCGCTTCACATTCAGCGACGCATTGATCGCCCGGCTGTCAGAGGTGTCCAACATC
GTCGCGGTGAAAATGCCTCTGGCGGCGAATGACGATTACGCGGGGGAACTGGCACGTTTGCGGTCGATGACGCCTGACAC
GTTCACAATCGGATACAGCGGCGATTGGGGCGCGGCGGATGCCCTGCTTGCCGGATGTGACACCTGGTACAGCGTTGCGG
CAGGTCTGCTGCCGGTCCCGGCGCTTGCGCTGACGCGTGCAGCGCAGTCCGGCGACGCGGTGGAGTCCACTCGGTTGAAC
CGCGCTTTCGGGCCGCTCTGGACCTTGTTCAAACACTACGGCAGCTTCCGCGTTATGTTCGTCATCGCCGACTACCTCGG
TCTGGCGCACGTCCAGCCACCGCGCCCTATTTTGCCGTTGCCGGAGGACGCCGGAGATGACATTAGGCAGGCATTGGAGA
AGCTCGAATAG

Upstream 100 bases:

>100_bases
TCGCCGCTGCCGCCGCTGGATCGAAAGTCTGTTGGCGATGTTCTTCGCGTTCGCCGGGCTGCGTATGCTGCTTTCCCGTA
TGTAGTTTCGAAAGGAATGG

Downstream 100 bases:

>100_bases
CCGAGCACAGGGCATGCCCAGTGCAACTGCGTGCGGGCGAAGATGTCGAGCGGGAACTGCCGGTCCTCTCGACCTTTCTC
GGCCACGCCAATGTTCGCGA

Product: dihydrodipicolinate synthetase

Products: NA

Alternate protein names: DHDPS [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MMTLFRGLSAFPLTPTDAEGHVDTEGLARFLERIQRAGADSIGLLGSTGGYAYLTREERKRAVQAAVECIGGKTPLVVGV
GALRTNEAQALARDAKSAGADGLLLAPMSYVPLNEDEVFQHFVAVAEAGELPLCIYNNPSTTRFTFSDALIARLSEVSNI
VAVKMPLAANDDYAGELARLRSMTPDTFTIGYSGDWGAADALLAGCDTWYSVAAGLLPVPALALTRAAQSGDAVESTRLN
RAFGPLWTLFKHYGSFRVMFVIADYLGLAHVQPPRPILPLPEDAGDDIRQALEKLE

Sequences:

>Translated_296_residues
MMTLFRGLSAFPLTPTDAEGHVDTEGLARFLERIQRAGADSIGLLGSTGGYAYLTREERKRAVQAAVECIGGKTPLVVGV
GALRTNEAQALARDAKSAGADGLLLAPMSYVPLNEDEVFQHFVAVAEAGELPLCIYNNPSTTRFTFSDALIARLSEVSNI
VAVKMPLAANDDYAGELARLRSMTPDTFTIGYSGDWGAADALLAGCDTWYSVAAGLLPVPALALTRAAQSGDAVESTRLN
RAFGPLWTLFKHYGSFRVMFVIADYLGLAHVQPPRPILPLPEDAGDDIRQALEKLE
>Mature_296_residues
MMTLFRGLSAFPLTPTDAEGHVDTEGLARFLERIQRAGADSIGLLGSTGGYAYLTREERKRAVQAAVECIGGKTPLVVGV
GALRTNEAQALARDAKSAGADGLLLAPMSYVPLNEDEVFQHFVAVAEAGELPLCIYNNPSTTRFTFSDALIARLSEVSNI
VAVKMPLAANDDYAGELARLRSMTPDTFTIGYSGDWGAADALLAGCDTWYSVAAGLLPVPALALTRAAQSGDAVESTRLN
RAFGPLWTLFKHYGSFRVMFVIADYLGLAHVQPPRPILPLPEDAGDDIRQALEKLE

Specific function: Unknown

COG id: COG0329

COG function: function code EM; Dihydrodipicolinate synthase/N-acetylneuraminate lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DHDPS family [H]

Homologues:

Organism=Escherichia coli, GI1786463, Length=294, Percent_Identity=27.5510204081633, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1788823, Length=295, Percent_Identity=26.7796610169492, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1789620, Length=285, Percent_Identity=27.0175438596491, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI87082415, Length=229, Percent_Identity=25.3275109170306, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005263
- InterPro:   IPR002220
- InterPro:   IPR020625
- InterPro:   IPR020624 [H]

Pfam domain/function: PF00701 DHDPS [H]

EC number: =4.2.1.52 [H]

Molecular weight: Translated: 31674; Mature: 31674

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTLFRGLSAFPLTPTDAEGHVDTEGLARFLERIQRAGADSIGLLGSTGGYAYLTREERK
CCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHH
RAVQAAVECIGGKTPLVVGVGALRTNEAQALARDAKSAGADGLLLAPMSYVPLNEDEVFQ
HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHH
HFVAVAEAGELPLCIYNNPSTTRFTFSDALIARLSEVSNIVAVKMPLAANDDYAGELARL
HHHHHHHCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHH
RSMTPDTFTIGYSGDWGAADALLAGCDTWYSVAAGLLPVPALALTRAAQSGDAVESTRLN
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RAFGPLWTLFKHYGSFRVMFVIADYLGLAHVQPPRPILPLPEDAGDDIRQALEKLE
HHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MMTLFRGLSAFPLTPTDAEGHVDTEGLARFLERIQRAGADSIGLLGSTGGYAYLTREERK
CCHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEHHHHH
RAVQAAVECIGGKTPLVVGVGALRTNEAQALARDAKSAGADGLLLAPMSYVPLNEDEVFQ
HHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHH
HFVAVAEAGELPLCIYNNPSTTRFTFSDALIARLSEVSNIVAVKMPLAANDDYAGELARL
HHHHHHHCCCCCEEEECCCCCCEEEHHHHHHHHHHHHHCEEEEEECCCCCCCHHHHHHHH
RSMTPDTFTIGYSGDWGAADALLAGCDTWYSVAAGLLPVPALALTRAAQSGDAVESTRLN
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RAFGPLWTLFKHYGSFRVMFVIADYLGLAHVQPPRPILPLPEDAGDDIRQALEKLE
HHHHHHHHHHHHHCCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA