| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475330
Identifier: 13475330
GI number: 13475330
Start: 5195919
End: 5196821
Strand: Direct
Name: 13475330
Synonym: mlr6370
Alternate gene names: NA
Gene position: 5195919-5196821 (Clockwise)
Preceding gene: 13475329
Following gene: 13475331
Centisome position: 73.85
GC content: 68.55
Gene sequence:
>903_bases ATGATCCAGACCGAACGCGCGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACAGGGTTCGCCGACGAGCATGCCGT GGAAGCGGTCAGGGGCGGCCAGTACATCCTGCAGCGCATCCACCCGAGCCTGCGCGACACCTGCGCCCGCACTGGCCGCG ATCCGCAGGCCGAAACGCTGATCGTGGCGTTCTATCGCGAACTGGCGCTGCTGTTCTGGCTCGACGATTGCAACGACCTT GGCCTGATCGCGCCGGAGGAGCTCGCCGCGGTGGAGCAGGCGCTGGGGCAGGGCGTGCCGTGCGCGCTCCCCGGATTCGA GGGCTGCGCTGCTCTGCGCGCTTCGCTGGCCGCGCTTGCCTACGATCGTCGCGACTATGCTCGGCTGCTCGACGACACTC GGTGCTACTGCGCGGCGCTGCGCGCCGGACACGCGCAGGCGGTAGGGGCGGAACGCTGGTCCTACGCCGAGTACCTGCAC AACGGCATCGATTCGATCGCCTACACGAACGTGTTCTGTTGCCTGTCGTTGCTGTGGGGGCTGGACATGGCGACCTTGCG CGCGCGTCCGGCGTTTCGCCAGGTCCTGCGGCTCATCTCCGCGATAGGGCGCCTGCAGAACGATCTGCATGGACGCGACA AGGACAGGTCGGCGGGCGAGGCCGACAACGCGGCGATCCTGCTGCGGCAGCGCTATCCGGCTATGCCTGTGGTGGAGTTC CTCAACGACGAGTTGGCCGGCCATACGCGCATGCTGCACCGGGTGATGGCGGAAGAACGCTTTCCCGCGCCGTGGGGAGC GTTGATCGAGGCCATGGCGGCCATCCGCGCGCAGTACTACCAGACCTCGACCAGCCGCTACCCCAGCGACGCTGCGGGGG GAGGCCAGCGTGCGCCCGCCTGA
Upstream 100 bases:
>100_bases ATTGCCCCACCCGGGTCGTGCGGGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCGGCGCGTCCTGGCC GAGGGAGCAGGAGCGGCGCC
Downstream 100 bases:
>100_bases ACGGCGGGATGCGGCTGCGTGCGCGCGCTGCCGTCGGTCCGATCCGATGCAACGCCGTCCCCCGATGCGACGGATGGAGC GAGCATGAGCGATAGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA
Sequences:
>Translated_300_residues MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA >Mature_300_residues MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETLIVAFYRELALLFWLDDCNDL GLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALAYDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLH NGIDSIAYTNVFCCLSLLWGLDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008949 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33181; Mature: 33181
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETL CCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHH IVAFYRELALLFWLDDCNDLGLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH YDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLHNGIDSIAYTNVFCCLSLLWG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHH LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MIQTERALQQVLEWGRSLTGFADEHAVEAVRGGQYILQRIHPSLRDTCARTGRDPQAETL CCCHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCHHHH IVAFYRELALLFWLDDCNDLGLIAPEELAAVEQALGQGVPCALPGFEGCAALRASLAALA HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH YDRRDYARLLDDTRCYCAALRAGHAQAVGAERWSYAEYLHNGIDSIAYTNVFCCLSLLWG HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC LDMATLRARPAFRQVLRLISAIGRLQNDLHGRDKDRSAGEADNAAILLRQRYPAMPVVEF CHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHCCCCCHHHHH LNDELAGHTRMLHRVMAEERFPAPWGALIEAMAAIRAQYYQTSTSRYPSDAAGGGQRAPA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]