| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13475329
Identifier: 13475329
GI number: 13475329
Start: 5194372
End: 5195922
Strand: Direct
Name: 13475329
Synonym: mlr6369
Alternate gene names: NA
Gene position: 5194372-5195922 (Clockwise)
Preceding gene: 13475328
Following gene: 13475330
Centisome position: 73.82
GC content: 68.73
Gene sequence:
>1551_bases GTGAACGCGCTGTCCGAACAGATCCTTTCCGAATTGCGCCACCTGCTGATCGAGATGAGCGACGGCGGCAGCGTCGGTCC GTCCGTCTACGACACGGCGCGAGCTCTGCAGTTCCACGGCAACGTCACCGATCGGCAGGACGCATACGCGTGGCTCATCG CGCAACAACAGGCCGATGGCGGATGGGGAAGCGCGGACTTCCCGCTGTTCCGCCATGCGCCCACCTGGGCGACGTTGCTG ACATTGCAGCGTGCCGATCCTCTTCCCGGCGCGGCCGACGCAGTCCAGGCTGCAACCCGGTTCCTCGAGCGCCAGCCCGA TCCCTACGCGCATTCGGTGCCGGAGGACGCGCCGATCGGCGCGGAGCTGATCCTGCCGCAGTTGTGCGGCGAGGCCGCAT CCTTGCTGGGCGGCGTGGGGTTTCCGCGCCACCCGGCGCTGTTGCCGTTGCGGCAGGCGTGCCTTGTCAAGTTGGGGGCG GTGGCGACGTTGCCGAGCGGCCATCCGTTGCTGCACTCCTGGGAAGCCTGGGGAACGTCGCCGACCACCGCATGCCCCGA CGACGACGGCAGCATTGGCATCAGTCCGGCGGCCACCGCCGCGTGGCGTGCGCACGCCGTAACACATGGGAGCACGCCGC AGGTCGGGCGCACCGACGCGTATCTGCAGGCGGCATCGCGGGCGACGCGCAGCGGCATCGAAGGTGTCGTTCCCAACGTC TGGCCGATCAATGTGTTCGAGCCATGCTGGTCGCTGTACACCCTGCATCTGGCCGGGCTGTTCGCGCATCCCGCGTTCGC CGATGCCGTGCGCGTGATCGTCGCGCAGCTCGACGCCCGCATGGGCGTGCGCGGTCTGGGCCCGGCCTTGCACTTCGCAG CCGATGCCGACGACACCTCCGTTGCGTTGTGCGTCCTGCGCCTTGCAGGTCGCGACCCGCCGGTCGATGCGCTGCGCGAT TTCGAAATCGGCGAGCTATTCGTCACCTTCCCCGGCGAGCGCAATGCCTCGGTGTCGACCAACATCCATGCCCTGCATGC GTTGCGACTGTTGGGAAAGCCCGCCGCCGGCACCAGCTACTACGTCGAGGCCAATCGCAACCCGCACGGTCTATGGGACA ACGAAAAATGGCACGTTTCGTGGCTGTATCCCACCGCGCATGCGGTCGCTGCGCTGGCGCAAGGCAAGCCCCAGTGGCGC GACGAGCGCGCGCTGGCGGCGCTGCTGCAGGCGCAGCGCGATGACGGCGGCTGGGGCGCCGGTCGCGCGTCCTCATTTGA GGAAACCGCCTATGCGCTGTTCGCGTTGCACGTCATGGACGGGAGCGAAGAGCCGACAGGGCGCCGGCGCATCGCGCAGG CGGTGGCGCGTGCGCTGGAGTGGATGCTCGCTCGCCATGTGGCGCATGCATTGCCGCAGACGGCGCTGTGGATCGGCAAG GAACTGTATTGCCCCACCCGGGTCGTGCGGGTGGCCGAACTCGCCGGGTTGTGGCTGGCGCTTCGTTGGGGGCGGCGCGT CCTGGCCGAGGGAGCAGGAGCGGCGCCATGA
Upstream 100 bases:
>100_bases GGCGCTGCCCGTGCGCCGGGCCGCGACGGGCCTGCGGCGACGTGCGCGGCGTCTGCCCGATCCAGGTTCCCGTCAACTGT CTGCAGAAGGAACATACCGC
Downstream 100 bases:
>100_bases TCCAGACCGAACGCGCGCTGCAGCAGGTGCTGGAGTGGGGGCGTTCCCTGACAGGGTTCGCCGACGAGCATGCCGTGGAA GCGGTCAGGGGCGGCCAGTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MNALSEQILSELRHLLIEMSDGGSVGPSVYDTARALQFHGNVTDRQDAYAWLIAQQQADGGWGSADFPLFRHAPTWATLL TLQRADPLPGAADAVQAATRFLERQPDPYAHSVPEDAPIGAELILPQLCGEAASLLGGVGFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTSPTTACPDDDGSIGISPAATAAWRAHAVTHGSTPQVGRTDAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPAFADAVRVIVAQLDARMGVRGLGPALHFAADADDTSVALCVLRLAGRDPPVDALRD FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSYYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASSFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHVAHALPQTALWIGK ELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP
Sequences:
>Translated_516_residues MNALSEQILSELRHLLIEMSDGGSVGPSVYDTARALQFHGNVTDRQDAYAWLIAQQQADGGWGSADFPLFRHAPTWATLL TLQRADPLPGAADAVQAATRFLERQPDPYAHSVPEDAPIGAELILPQLCGEAASLLGGVGFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTSPTTACPDDDGSIGISPAATAAWRAHAVTHGSTPQVGRTDAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPAFADAVRVIVAQLDARMGVRGLGPALHFAADADDTSVALCVLRLAGRDPPVDALRD FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSYYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASSFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHVAHALPQTALWIGK ELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP >Mature_516_residues MNALSEQILSELRHLLIEMSDGGSVGPSVYDTARALQFHGNVTDRQDAYAWLIAQQQADGGWGSADFPLFRHAPTWATLL TLQRADPLPGAADAVQAATRFLERQPDPYAHSVPEDAPIGAELILPQLCGEAASLLGGVGFPRHPALLPLRQACLVKLGA VATLPSGHPLLHSWEAWGTSPTTACPDDDGSIGISPAATAAWRAHAVTHGSTPQVGRTDAYLQAASRATRSGIEGVVPNV WPINVFEPCWSLYTLHLAGLFAHPAFADAVRVIVAQLDARMGVRGLGPALHFAADADDTSVALCVLRLAGRDPPVDALRD FEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSYYVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWR DERALAALLQAQRDDGGWGAGRASSFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHVAHALPQTALWIGK ELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PFTB repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008930 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55438; Mature: 55438
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALSEQILSELRHLLIEMSDGGSVGPSVYDTARALQFHGNVTDRQDAYAWLIAQQQADG CCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC GWGSADFPLFRHAPTWATLLTLQRADPLPGAADAVQAATRFLERQPDPYAHSVPEDAPIG CCCCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AELILPQLCGEAASLLGGVGFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCC PTTACPDDDGSIGISPAATAAWRAHAVTHGSTPQVGRTDAYLQAASRATRSGIEGVVPNV CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC WPINVFEPCWSLYTLHLAGLFAHPAFADAVRVIVAQLDARMGVRGLGPALHFAADADDTS CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHH VALCVLRLAGRDPPVDALRDFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSY HHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC GRASSFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHVAHALPQTALWIGK CCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC ELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNALSEQILSELRHLLIEMSDGGSVGPSVYDTARALQFHGNVTDRQDAYAWLIAQQQADG CCHHHHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCC GWGSADFPLFRHAPTWATLLTLQRADPLPGAADAVQAATRFLERQPDPYAHSVPEDAPIG CCCCCCCCHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC AELILPQLCGEAASLLGGVGFPRHPALLPLRQACLVKLGAVATLPSGHPLLHSWEAWGTS HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHEECCCCCCCCCCHHHCCCC PTTACPDDDGSIGISPAATAAWRAHAVTHGSTPQVGRTDAYLQAASRATRSGIEGVVPNV CCCCCCCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCC WPINVFEPCWSLYTLHLAGLFAHPAFADAVRVIVAQLDARMGVRGLGPALHFAADADDTS CCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCHHEEECCCCCHH VALCVLRLAGRDPPVDALRDFEIGELFVTFPGERNASVSTNIHALHALRLLGKPAAGTSY HHHHHHHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEE YVEANRNPHGLWDNEKWHVSWLYPTAHAVAALAQGKPQWRDERALAALLQAQRDDGGWGA EEECCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC GRASSFEETAYALFALHVMDGSEEPTGRRRIAQAVARALEWMLARHVAHALPQTALWIGK CCCCCHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC ELYCPTRVVRVAELAGLWLALRWGRRVLAEGAGAAP HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9655913; 12597275 [H]