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The map label for this gene is flhB [C]

Identifier: 13475308

GI number: 13475308

Start: 5162186

End: 5163223

Strand: Direct

Name: flhB [C]

Synonym: mlr6346

Alternate gene names: 13475308

Gene position: 5162186-5163223 (Clockwise)

Preceding gene: 13475307

Following gene: 13475309

Centisome position: 73.37

GC content: 56.94

Gene sequence:

>1038_bases
ATGAGCGACTCGAGCGAAGAGAAGACACACGCCGCCACCCCCAAAAAGCTAAACGATGCACGCAAAAAAGGGCAGCTGCC
ACATAGCTCCGATTTCGTTCGCGCGGTCGGCACTTGCGCTGGTCTCGGATACCTTTGGCTAAGAGGCAGCGCGATCGAAG
ACAAATGCCGCGAAGCGCTACTATTTGTCGACAAGCTGCAGAACCTGCCATTTGACTTCGCGGTCCGGCAGGCGCTGGTT
GTGCTTGCCGAACTCACCTTGGCAACTGTTGGCCCGCTGCTTGGAACGCTTGTCGCGGCGGTGCTTTTGGCAAGCATATT
AGCCAATGGTGGATTTGTTTTCTCTCTCGAGCCAATGACGCCCAACTTCGATAAAATTAATCCTTTTCAAGGGCTGAAGC
GCTTGGCGTCTGCGCGTTCGATGGTCGAACTCGGGAAGACGCTGTTTAAAGTATTCGTTCTCGGCGCAACCTTTTCCTTT
TGCCTTCTCGGCATGTGGAAGACGATGGTCTATCTGCCGTTCTGCGGCATGGGCTGTTTGGGCCTTGTCGTTACGGGGGC
AAAACTGCTGATCGGAATTGGCGCCGGCGCACTTCTGGCCGCTGGCCTGATCGATCTCCTGGTGCAGCGTGCGTTGTTTC
TGCGCGAAATGAGGATGACCAAGACTGAAGTCACGCGCGAGCTGAAGGATCAGCAAGGGGCGCCAGAGTTGAAGAGTGAA
CGACGTCGCATTCGTGACGAGTCAGCTGACGAACCTCCCCTCGGTGTGCATCACGCCACGCTGATCTTCAAAGGAACGGC
GATACTGATCGGTCTGCGTTACGTCCGCGGTGAAACCGGGGTGCCCGTCCTGGTTTGCCGCGCCGATGGCGAGCGGGCTT
CACACCTGCTTAGCGAGGCGCGAGCGCTACGTCTTGAAATTGTCGACAACGATGTCCTAGCGCATCAGCTCATCGGCAAA
ACGCAACTGGGCAGACCCATTCCCATGCAATATTTCGAGCCCGTGGCGAGAGCACTCTTCGCCGCAGGATTGGCCTAG

Upstream 100 bases:

>100_bases
CGATTCTCATGGTTACATACGCTGGCTATCTCGTAGAGGGTATGAAACTGGAGATCACACAAGCGAATGGCGCGCTCGAG
TGGTTCGATAGATTGCTGAA

Downstream 100 bases:

>100_bases
CCCTGGGGCCTCTGTGGCCGCCCCGTAACACAAGAGGGCTAGTGCCATTTTGGACGTGATCGGAGTGCGGTCTTCCGTGA
GGCCTTTATGTGTAACATTC

Product: translocation protein in type III secretion system, hrcU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MSDSSEEKTHAATPKKLNDARKKGQLPHSSDFVRAVGTCAGLGYLWLRGSAIEDKCREALLFVDKLQNLPFDFAVRQALV
VLAELTLATVGPLLGTLVAAVLLASILANGGFVFSLEPMTPNFDKINPFQGLKRLASARSMVELGKTLFKVFVLGATFSF
CLLGMWKTMVYLPFCGMGCLGLVVTGAKLLIGIGAGALLAAGLIDLLVQRALFLREMRMTKTEVTRELKDQQGAPELKSE
RRRIRDESADEPPLGVHHATLIFKGTAILIGLRYVRGETGVPVLVCRADGERASHLLSEARALRLEIVDNDVLAHQLIGK
TQLGRPIPMQYFEPVARALFAAGLA

Sequences:

>Translated_345_residues
MSDSSEEKTHAATPKKLNDARKKGQLPHSSDFVRAVGTCAGLGYLWLRGSAIEDKCREALLFVDKLQNLPFDFAVRQALV
VLAELTLATVGPLLGTLVAAVLLASILANGGFVFSLEPMTPNFDKINPFQGLKRLASARSMVELGKTLFKVFVLGATFSF
CLLGMWKTMVYLPFCGMGCLGLVVTGAKLLIGIGAGALLAAGLIDLLVQRALFLREMRMTKTEVTRELKDQQGAPELKSE
RRRIRDESADEPPLGVHHATLIFKGTAILIGLRYVRGETGVPVLVCRADGERASHLLSEARALRLEIVDNDVLAHQLIGK
TQLGRPIPMQYFEPVARALFAAGLA
>Mature_344_residues
SDSSEEKTHAATPKKLNDARKKGQLPHSSDFVRAVGTCAGLGYLWLRGSAIEDKCREALLFVDKLQNLPFDFAVRQALVV
LAELTLATVGPLLGTLVAAVLLASILANGGFVFSLEPMTPNFDKINPFQGLKRLASARSMVELGKTLFKVFVLGATFSFC
LLGMWKTMVYLPFCGMGCLGLVVTGAKLLIGIGAGALLAAGLIDLLVQRALFLREMRMTKTEVTRELKDQQGAPELKSER
RRIRDESADEPPLGVHHATLIFKGTAILIGLRYVRGETGVPVLVCRADGERASHLLSEARALRLEIVDNDVLAHQLIGKT
QLGRPIPMQYFEPVARALFAAGLA

Specific function: Could be involved in the secretion of an unknown factor [H]

COG id: COG4792

COG function: function code U; Type III secretory pathway, component EscU

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type III secretion exporter family [H]

Homologues:

Organism=Escherichia coli, GI1788188, Length=353, Percent_Identity=26.9121813031161, Blast_Score=111, Evalue=7e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 37423; Mature: 37291

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDSSEEKTHAATPKKLNDARKKGQLPHSSDFVRAVGTCAGLGYLWLRGSAIEDKCREAL
CCCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFVDKLQNLPFDFAVRQALVVLAELTLATVGPLLGTLVAAVLLASILANGGFVFSLEPMT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PNFDKINPFQGLKRLASARSMVELGKTLFKVFVLGATFSFCLLGMWKTMVYLPFCGMGCL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVVTGAKLLIGIGAGALLAAGLIDLLVQRALFLREMRMTKTEVTRELKDQQGAPELKSE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RRRIRDESADEPPLGVHHATLIFKGTAILIGLRYVRGETGVPVLVCRADGERASHLLSEA
HHHHHCCCCCCCCCCCHHHHHHEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
RALRLEIVDNDVLAHQLIGKTQLGRPIPMQYFEPVARALFAAGLA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDSSEEKTHAATPKKLNDARKKGQLPHSSDFVRAVGTCAGLGYLWLRGSAIEDKCREAL
CCCCCCHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LFVDKLQNLPFDFAVRQALVVLAELTLATVGPLLGTLVAAVLLASILANGGFVFSLEPMT
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
PNFDKINPFQGLKRLASARSMVELGKTLFKVFVLGATFSFCLLGMWKTMVYLPFCGMGCL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVVTGAKLLIGIGAGALLAAGLIDLLVQRALFLREMRMTKTEVTRELKDQQGAPELKSE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
RRRIRDESADEPPLGVHHATLIFKGTAILIGLRYVRGETGVPVLVCRADGERASHLLSEA
HHHHHCCCCCCCCCCCHHHHHHEEHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHH
RALRLEIVDNDVLAHQLIGKTQLGRPIPMQYFEPVARALFAAGLA
HHHHHHHHCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]