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The map label for this gene is 13475307

Identifier: 13475307

GI number: 13475307

Start: 5161371

End: 5162189

Strand: Direct

Name: 13475307

Synonym: mlr6345

Alternate gene names: NA

Gene position: 5161371-5162189 (Clockwise)

Preceding gene: 13475306

Following gene: 13475308

Centisome position: 73.36

GC content: 54.46

Gene sequence:

>819_bases
ATGTATGCGTCACCGGCCGAGATTCAGATCCTCATGCATACGGCTATCGAACTCGTCGTAGCAGCCGGTCTTGGCGCAGC
GCGCGCGATAGGCATTATGATGATCCTACCGGTATTTACACGTTCTCAGACCGATGGCCTGATCCGCGGCTGCCTGGCTG
TCGGCTTCGGATTACCATGTCTGGCACATGTCAGCGACGCGTTGCAGGCGCTGGATCCTGAAACACGTCTGATTGAGGTA
GCTCTGCTCGGATTGAAGGAAGTTCTTGTCGGCGCACTACTTGGCACCTTCCTTGGCATTCCCTTATGGGGACTTCAGGC
GGCCGGTGAGTTTATCGACAACCAACGCGGCGTCACCAACCCGTCCGCCCCGACCGACCCCGCGACGAATAGTCAGGCTT
CCGCCATGGGAGTCTTTCTCGGGATCACTGCGATTGCCATCTTCGTCGCATCAGGGGGGCTGGAAACGTTGATCGGCGCC
CTTTATGGCAGCTATTTGATCTGGCCCGTGTATAAGTTTTATCCTACATTGAGCACGCAAGGAGCAATGGAGGTGTTAGG
GCTCCTCGACCAGATTATGCGCACGGCGTTATTGGTGTCAGGGCCCGTCGTGTTCTTTATGACGCTGATTGATGTATCCT
TTATGCTACTGCGTCGCTTTGCGCCGCAATTCAAATTGACCCAACTGTCCCCGGCGATCAAGAATCTTGTCTTTCCGATT
CTCATGGTTACATACGCTGGCTATCTCGTAGAGGGTATGAAACTGGAGATCACACAAGCGAATGGCGCGCTCGAGTGGTT
CGATAGATTGCTGAAATGA

Upstream 100 bases:

>100_bases
TTGGTTTGTTTGCTCCTGTGCTGAGCGCCCCGCTGATAGAGCTAACCGACCAGATCTTTACCGAGTTTCCCGCCATGACA
CTTAGCTACTAGTCTCCGCC

Downstream 100 bases:

>100_bases
GCGACTCGAGCGAAGAGAAGACACACGCCGCCACCCCCAAAAAGCTAAACGATGCACGCAAAAAAGGGCAGCTGCCACAT
AGCTCCGATTTCGTTCGCGC

Product: translocation protein in type III secretion system, hrcT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MYASPAEIQILMHTAIELVVAAGLGAARAIGIMMILPVFTRSQTDGLIRGCLAVGFGLPCLAHVSDALQALDPETRLIEV
ALLGLKEVLVGALLGTFLGIPLWGLQAAGEFIDNQRGVTNPSAPTDPATNSQASAMGVFLGITAIAIFVASGGLETLIGA
LYGSYLIWPVYKFYPTLSTQGAMEVLGLLDQIMRTALLVSGPVVFFMTLIDVSFMLLRRFAPQFKLTQLSPAIKNLVFPI
LMVTYAGYLVEGMKLEITQANGALEWFDRLLK

Sequences:

>Translated_272_residues
MYASPAEIQILMHTAIELVVAAGLGAARAIGIMMILPVFTRSQTDGLIRGCLAVGFGLPCLAHVSDALQALDPETRLIEV
ALLGLKEVLVGALLGTFLGIPLWGLQAAGEFIDNQRGVTNPSAPTDPATNSQASAMGVFLGITAIAIFVASGGLETLIGA
LYGSYLIWPVYKFYPTLSTQGAMEVLGLLDQIMRTALLVSGPVVFFMTLIDVSFMLLRRFAPQFKLTQLSPAIKNLVFPI
LMVTYAGYLVEGMKLEITQANGALEWFDRLLK
>Mature_272_residues
MYASPAEIQILMHTAIELVVAAGLGAARAIGIMMILPVFTRSQTDGLIRGCLAVGFGLPCLAHVSDALQALDPETRLIEV
ALLGLKEVLVGALLGTFLGIPLWGLQAAGEFIDNQRGVTNPSAPTDPATNSQASAMGVFLGITAIAIFVASGGLETLIGA
LYGSYLIWPVYKFYPTLSTQGAMEVLGLLDQIMRTALLVSGPVVFFMTLIDVSFMLLRRFAPQFKLTQLSPAIKNLVFPI
LMVTYAGYLVEGMKLEITQANGALEWFDRLLK

Specific function: Could be involved in the secretion of an unknown factor [H]

COG id: COG4791

COG function: function code U; Type III secretory pathway, component EscT

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliR/mopE/spaR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002010
- InterPro:   IPR006304 [H]

Pfam domain/function: PF01311 Bac_export_1 [H]

EC number: NA

Molecular weight: Translated: 29121; Mature: 29121

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC
>Mature Secondary Structure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HHHHHHHHHHCCCEEEEEECCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]